RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 TNXBP22105 4242 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 IGKV2-24A0A0C4DH68 120 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 TRGC2P03986 189 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 NPSP0C0P6 89 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 INAFM2P0DMQ5 153 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
PCNX1-210ENST00000555780 KRTAP11-1Q8IUC1 163 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 CARD19Q96LW7 228 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 SCGB3A1Q96QR1 104 aa4.23□□□□□ -1.73
PCNX1-210ENST00000555780 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
PCNX1-210ENST00000555780 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.22□□□□□ -1.73
PCNX1-210ENST00000555780 ZNF561-AS1K7EIQ3 104 aa4.22□□□□□ -1.73
PCNX1-210ENST00000555780 MALP21145 153 aa4.22□□□□□ -1.73
PCNX1-210ENST00000555780 FA2HQ7L5A8 372 aa4.22□□□□□ -1.73
PCNX1-210ENST00000555780 LINC01561Q8N1V8 128 aa4.22□□□□□ -1.73
PCNX1-210ENST00000555780 OR10D4PQ8NGN7 298 aa4.22□□□□□ -1.73
PCNX1-210ENST00000555780 CAMK2N2Q96S95 79 aa4.22□□□□□ -1.73
PCNX1-210ENST00000555780 FAM168BA1KXE4 195 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 PTTG1IPP53801 180 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 GAGE2BQ13066 116 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 PMVKQ15126 192 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 MAJINQ3KP22 176 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 Q6ZRP5 223 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 FAM19A2Q8N3H0 131 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 STPG4Q8N801 248 aa4.21□□□□□ -1.74
PCNX1-210ENST00000555780 MRPL35Q9NZE8 188 aaKnown RBP4.21□□□□□ -1.74
PCNX1-210ENST00000555780 TINCRA0A1B0GVN0 87 aa4.2□□□□□ -1.74
PCNX1-210ENST00000555780 APOMO95445 188 aa4.2□□□□□ -1.74
PCNX1-210ENST00000555780 HBDP02042 147 aa4.2□□□□□ -1.74
PCNX1-210ENST00000555780 TLX1NBP0CAT3 122 aa4.2□□□□□ -1.74
PCNX1-210ENST00000555780 IGLC3P0DOY3 106 aa4.2□□□□□ -1.74
PCNX1-210ENST00000555780 RNF151Q2KHN1 245 aa4.2□□□□□ -1.74
PCNX1-210ENST00000555780 Q6ZN92 141 aa4.2□□□□□ -1.74
PCNX1-210ENST00000555780 FLG2Q5D862 2391 aaPredicted RBP4.2□□□□□ -1.74
PCNX1-210ENST00000555780 IGLV5-39A0A0G2JS06 123 aa4.19□□□□□ -1.74
PCNX1-210ENST00000555780 LOC107984640A0A0U1RRK4 108 aa4.19□□□□□ -1.74
PCNX1-210ENST00000555780 C11orf86A6NJI1 115 aa4.19□□□□□ -1.74
PCNX1-210ENST00000555780 SERF1AO75920 110 aa4.19□□□□□ -1.74
PCNX1-210ENST00000555780 SPINK8P0C7L1 97 aa4.19□□□□□ -1.74
PCNX1-210ENST00000555780 ZNF22P17026 224 aaPredicted RBP4.19□□□□□ -1.74
PCNX1-210ENST00000555780 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
PCNX1-210ENST00000555780 HERVK_113P63121 156 aa4.19□□□□□ -1.74
PCNX1-210ENST00000555780 C9orf129Q5T035 196 aaKnown RBP4.19□□□□□ -1.74
PCNX1-210ENST00000555780 C2orf88Q9BSF0 95 aa4.19□□□□□ -1.74
PCNX1-210ENST00000555780 NDUFA1O15239 70 aa4.18□□□□□ -1.74
PCNX1-210ENST00000555780 G0S2P27469 103 aa4.18□□□□□ -1.74
PCNX1-210ENST00000555780 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
PCNX1-210ENST00000555780 BAGE3Q86Y29 109 aa4.18□□□□□ -1.74
PCNX1-210ENST00000555780 Q8IZM0 81 aa4.18□□□□□ -1.74
PCNX1-210ENST00000555780 CHCHD1Q96BP2 118 aaKnown RBP4.18□□□□□ -1.74
PCNX1-210ENST00000555780 F8WDY8 70 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BKO60814 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 PLA2G1BP04054 148 aaKnown RBP4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BJP06899 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BOP23527 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BBP33778 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BDP58876 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BCP62807 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 RPL18AQ02543 176 aaKnown RBP4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST2H2BEQ16778 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 PAPPA-AS1Q5QFB9 102 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.17□□□□□ -1.74
PCNX1-210ENST00000555780 SERTAD4-AS1Q5TG53 156 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 LINC00469Q8N7U9 141 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BHQ93079 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 DPH3Q96FX2 82 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BNQ99877 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 HIST1H2BMQ99879 126 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 GEMIN7Q9H840 131 aaKnown RBP4.17□□□□□ -1.74
PCNX1-210ENST00000555780 TOMM7Q9P0U1 55 aa4.17□□□□□ -1.74
PCNX1-210ENST00000555780 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 NDUFA6P56556 154 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 RAB5BP61020 215 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 PRR3P79522 188 aaKnown RBP4.16□□□□□ -1.74
PCNX1-210ENST00000555780 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
PCNX1-210ENST00000555780 GAGE2EQ4V326 116 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 Q8NDZ9 215 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 COX7B2Q8TF08 81 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 IFI27L1Q96BM0 104 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 GAGE2DQ9UEU5 116 aa4.16□□□□□ -1.74
PCNX1-210ENST00000555780 TRAV12-1A0A0B4J245 112 aa4.15□□□□□ -1.75
PCNX1-210ENST00000555780 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
PCNX1-210ENST00000555780 NDUFC2-KCTD14E9PQ53 114 aa4.15□□□□□ -1.75
PCNX1-210ENST00000555780 ATP5LO75964 103 aa4.15□□□□□ -1.75
PCNX1-210ENST00000555780 SEC11AP67812 179 aa4.15□□□□□ -1.75
PCNX1-210ENST00000555780 ODF1Q14990 250 aa4.15□□□□□ -1.75
PCNX1-210ENST00000555780 C6orf226Q5I0X4 101 aa4.15□□□□□ -1.75
PCNX1-210ENST00000555780 XAGE1AQ9HD64 81 aa4.15□□□□□ -1.75
PCNX1-210ENST00000555780 CHTOPQ9Y3Y2 248 aaKnown RBP4.15□□□□□ -1.75
PCNX1-210ENST00000555780 TMEM223A0PJW6 202 aa4.14□□□□□ -1.75
PCNX1-210ENST00000555780 F8VRH5 84 aa4.14□□□□□ -1.75
PCNX1-210ENST00000555780 HSBP1O75506 76 aa4.14□□□□□ -1.75
PCNX1-210ENST00000555780 TSPEAR-AS2P59090 65 aa4.14□□□□□ -1.75
PCNX1-210ENST00000555780 ZNF625Q96I27 306 aaPredicted RBP4.14□□□□□ -1.75
PCNX1-210ENST00000555780 PMCHL2Q9BQD1 86 aa4.14□□□□□ -1.75
PCNX1-210ENST00000555780 LINC00474Q9P2X8 69 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms