RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 ZNF22P17026 224 aaPredicted RBP6.35□□□□□ -1.39
ACTN1-215ENST00000555616 MALP21145 153 aa6.35□□□□□ -1.39
ACTN1-215ENST00000555616 GCSHP23434 173 aa6.35□□□□□ -1.39
ACTN1-215ENST00000555616 HERVK_113P61574 105 aa6.35□□□□□ -1.39
ACTN1-215ENST00000555616 COX6A2Q02221 97 aa6.35□□□□□ -1.39
ACTN1-215ENST00000555616 C14orf144Q96I85 54 aa6.35□□□□□ -1.39
ACTN1-215ENST00000555616 NMUP48645 174 aa6.34□□□□□ -1.39
ACTN1-215ENST00000555616 HNRNPA3P51991 378 aaKnown RBP6.34□□□□□ -1.39
ACTN1-215ENST00000555616 CDKN2A-AS1Q9UH64 79 aa6.34□□□□□ -1.39
ACTN1-215ENST00000555616 A0A087WZ39 114 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 E9PLD3 99 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 APOMO95445 188 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 XGP55808 180 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 FOXI1Q12951 378 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 C5orf38Q86SI9 138 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 BOD1L2Q8IYS8 172 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 LINC01561Q8N1V8 128 aa6.33□□□□□ -1.4
ACTN1-215ENST00000555616 IGKV2D-26A0A0A0MRZ7 120 aa6.32□□□□□ -1.4
ACTN1-215ENST00000555616 TMEM223A0PJW6 202 aa6.32□□□□□ -1.4
ACTN1-215ENST00000555616 LECT2O14960 151 aa6.32□□□□□ -1.4
ACTN1-215ENST00000555616 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
ACTN1-215ENST00000555616 KRTAP26-1Q6PEX3 210 aa6.32□□□□□ -1.4
ACTN1-215ENST00000555616 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
ACTN1-215ENST00000555616 IGHV3-64A0A075B6Q5 118 aa6.3□□□□□ -1.4
ACTN1-215ENST00000555616 IGHV1-58A0A0C4DH39 117 aa6.3□□□□□ -1.4
ACTN1-215ENST00000555616 PRSS2P07478 247 aa6.3□□□□□ -1.4
ACTN1-215ENST00000555616 CTAG1AP78358 180 aa6.3□□□□□ -1.4
ACTN1-215ENST00000555616 PCP2Q8IVA1 136 aa6.3□□□□□ -1.4
ACTN1-215ENST00000555616 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
ACTN1-215ENST00000555616 IGLV5-39A0A0G2JS06 123 aa6.29□□□□□ -1.4
ACTN1-215ENST00000555616 M0R143 59 aa6.29□□□□□ -1.4
ACTN1-215ENST00000555616 LEPROTO15243 131 aa6.29□□□□□ -1.4
ACTN1-215ENST00000555616 Q6ZSA8 131 aa6.29□□□□□ -1.4
ACTN1-215ENST00000555616 ORAOV1Q8WV07 137 aa6.29□□□□□ -1.4
ACTN1-215ENST00000555616 HIGD1BQ9P298 99 aa6.29□□□□□ -1.4
ACTN1-215ENST00000555616 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.28□□□□□ -1.4
ACTN1-215ENST00000555616 MYMXA0A1B0GTQ4 84 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 LGALS3P17931 250 aaKnown RBP6.28□□□□□ -1.4
ACTN1-215ENST00000555616 SPAG11BQ08648 103 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 C14orf177Q52M58 125 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 COX7B2Q8TF08 81 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 TOMM7Q9P0U1 55 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
ACTN1-215ENST00000555616 FAT1Q14517 4588 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 GVQW2A0A096LPI5 108 aaPredicted RBP6.27□□□□□ -1.41
ACTN1-215ENST00000555616 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 USP17L23D6RBM5 183 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 J3QQQ9 107 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 ZNF561-AS1K7EIQ3 104 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 CXCL5P42830 114 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 CKS1BP61024 79 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 LBHQ53QV2 105 aaPredicted RBP6.27□□□□□ -1.41
ACTN1-215ENST00000555616 C6orf226Q5I0X4 101 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 SFTA2Q6UW10 78 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 Q8IZM0 81 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
ACTN1-215ENST00000555616 F8WDY8 70 aa6.26□□□□□ -1.41
ACTN1-215ENST00000555616 HAMPP81172 84 aa6.26□□□□□ -1.41
ACTN1-215ENST00000555616 HSD52Q0P140 79 aa6.26□□□□□ -1.41
ACTN1-215ENST00000555616 Q5VSD8 79 aa6.26□□□□□ -1.41
ACTN1-215ENST00000555616 C15orf56Q8N910 161 aa6.26□□□□□ -1.41
ACTN1-215ENST00000555616 SNHG12Q9BXW3 62 aa6.26□□□□□ -1.41
ACTN1-215ENST00000555616 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
ACTN1-215ENST00000555616 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
ACTN1-215ENST00000555616 TSPEAR-AS2P59090 65 aa6.25□□□□□ -1.41
ACTN1-215ENST00000555616 HIGD2BQ4VC39 106 aa6.25□□□□□ -1.41
ACTN1-215ENST00000555616 C2orf48Q96LS8 159 aa6.25□□□□□ -1.41
ACTN1-215ENST00000555616 NDUFA12Q9UI09 145 aa6.25□□□□□ -1.41
ACTN1-215ENST00000555616 NDUFA1O15239 70 aa6.24□□□□□ -1.41
ACTN1-215ENST00000555616 HERV-K104P63124 156 aa6.24□□□□□ -1.41
ACTN1-215ENST00000555616 TAL2Q16559 108 aa6.24□□□□□ -1.41
ACTN1-215ENST00000555616 LINC01620Q4KN68 170 aa6.24□□□□□ -1.41
ACTN1-215ENST00000555616 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
ACTN1-215ENST00000555616 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
ACTN1-215ENST00000555616 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
ACTN1-215ENST00000555616 BATFQ16520 125 aa6.23□□□□□ -1.41
ACTN1-215ENST00000555616 BVES-AS1Q5T3Y7 98 aa6.23□□□□□ -1.41
ACTN1-215ENST00000555616 SCGB1D4Q6XE38 83 aa6.23□□□□□ -1.41
ACTN1-215ENST00000555616 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
ACTN1-215ENST00000555616 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
ACTN1-215ENST00000555616 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.22□□□□□ -1.41
ACTN1-215ENST00000555616 COL5A1-AS1Q5SY13 56 aa6.22□□□□□ -1.41
ACTN1-215ENST00000555616 C2orf82Q6UX34 121 aa6.22□□□□□ -1.41
ACTN1-215ENST00000555616 SCXQ7RTU7 201 aa6.22□□□□□ -1.41
ACTN1-215ENST00000555616 LINC00526Q96FQ7 95 aa6.22□□□□□ -1.41
ACTN1-215ENST00000555616 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
ACTN1-215ENST00000555616 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
ACTN1-215ENST00000555616 FAM229AH3BQW9 127 aa6.21□□□□□ -1.42
ACTN1-215ENST00000555616 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
ACTN1-215ENST00000555616 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
ACTN1-215ENST00000555616 SPANXB1Q9NS25 103 aaPredicted RBP6.21□□□□□ -1.42
ACTN1-215ENST00000555616 TRBV30A0A0K0K1B3 111 aa6.2□□□□□ -1.42
ACTN1-215ENST00000555616 TMEM238C9JI98 176 aa6.2□□□□□ -1.42
ACTN1-215ENST00000555616 INAFM2P0DMQ5 153 aa6.2□□□□□ -1.42
ACTN1-215ENST00000555616 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
ACTN1-215ENST00000555616 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
ACTN1-215ENST00000555616 MEIG1Q5JSS6 88 aa6.2□□□□□ -1.42
ACTN1-215ENST00000555616 UNQ6190/PRO20217Q6UXQ8 127 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms