RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 M0R2N4 97 aa6.43□□□□□ -1.38
HNRNPC-220ENST00000555585 CTAG1AP78358 180 aa6.43□□□□□ -1.38
HNRNPC-220ENST00000555585 SPAG11BQ08648 103 aa6.43□□□□□ -1.38
HNRNPC-220ENST00000555585 C2orf91Q6ZV80 131 aa6.43□□□□□ -1.38
HNRNPC-220ENST00000555585 Q8IZM0 81 aa6.43□□□□□ -1.38
HNRNPC-220ENST00000555585 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
HNRNPC-220ENST00000555585 TGP01266 2768 aa6.42□□□□□ -1.38
HNRNPC-220ENST00000555585 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
HNRNPC-220ENST00000555585 PSCAO43653 123 aa6.42□□□□□ -1.38
HNRNPC-220ENST00000555585 CKS1BP61024 79 aa6.42□□□□□ -1.38
HNRNPC-220ENST00000555585 ZNF625Q96I27 306 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-220ENST00000555585 HIGD1BQ9P298 99 aa6.42□□□□□ -1.38
HNRNPC-220ENST00000555585 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
HNRNPC-220ENST00000555585 HERV-K104P63124 156 aa6.41□□□□□ -1.38
HNRNPC-220ENST00000555585 KIAA0087Q14695 138 aa6.41□□□□□ -1.38
HNRNPC-220ENST00000555585 HIGD2BQ4VC39 106 aa6.41□□□□□ -1.38
HNRNPC-220ENST00000555585 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
HNRNPC-220ENST00000555585 LINC00476Q8WZB0 136 aa6.41□□□□□ -1.38
HNRNPC-220ENST00000555585 LINC00526Q96FQ7 95 aa6.41□□□□□ -1.38
HNRNPC-220ENST00000555585 LINC00587B1AMM8 73 aa6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 CXCL5P42830 114 aa6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 CIRBPQ14011 172 aaKnown RBP6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 SFTA2Q6UW10 78 aa6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 C6orf223Q8N319 242 aa6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 C15orf56Q8N910 161 aa6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 HIST1H4GQ99525 98 aa6.4□□□□□ -1.38
HNRNPC-220ENST00000555585 LYSTQ99698 3801 aa6.4□□□□□ -1.39
HNRNPC-220ENST00000555585 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
HNRNPC-220ENST00000555585 VPS13DQ5THJ4 4388 aa6.39□□□□□ -1.39
HNRNPC-220ENST00000555585 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
HNRNPC-220ENST00000555585 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
HNRNPC-220ENST00000555585 USP17L23D6RBM5 183 aa6.39□□□□□ -1.39
HNRNPC-220ENST00000555585 LECT2O14960 151 aa6.39□□□□□ -1.39
HNRNPC-220ENST00000555585 HSD52Q0P140 79 aa6.39□□□□□ -1.39
HNRNPC-220ENST00000555585 SRSF9Q13242 221 aaKnown RBP eCLIP6.39□□□□□ -1.39
HNRNPC-220ENST00000555585 EREGO14944 169 aa6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 SMIM13P0DJ93 91 aa6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 HINT1P49773 126 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 BATFQ16520 125 aa6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 TAL2Q16559 108 aa6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 UNQ6190/PRO20217Q6UXQ8 127 aa6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 NTN5Q8WTR8 489 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 CAMK2N2Q96S95 79 aa6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-220ENST00000555585 DNAH1Q9P2D7 4330 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 EIF4EBP3O60516 100 aaPredicted RBP6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 TIMM17BO60830 172 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 GCSHP23434 173 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 PFN2P35080 140 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 LINC00158P58513 81 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 Q6ZR54 194 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 C2orf48Q96LS8 159 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 ERG28Q9UKR5 140 aa6.37□□□□□ -1.39
HNRNPC-220ENST00000555585 M0R143 59 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 NPC2P61916 151 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 C10orf25Q5T742 122 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 CEND1Q8N111 149 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 DAND5Q8N907 189 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 LITAFQ99732 161 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
HNRNPC-220ENST00000555585 F8WDY8 70 aa6.35□□□□□ -1.39
HNRNPC-220ENST00000555585 PTTG1IPP53801 180 aa6.35□□□□□ -1.39
HNRNPC-220ENST00000555585 C9orf116Q5BN46 136 aaPredicted RBP6.35□□□□□ -1.39
HNRNPC-220ENST00000555585 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
HNRNPC-220ENST00000555585 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
HNRNPC-220ENST00000555585 Q6ZRU5 148 aa6.35□□□□□ -1.39
HNRNPC-220ENST00000555585 MUSTN1Q8IVN3 82 aa6.35□□□□□ -1.39
HNRNPC-220ENST00000555585 TRBV30A0A0K0K1B3 111 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 WFDC2Q14508 124 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 C14orf177Q52M58 125 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 Q6ZRN7 208 aaPredicted RBP6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 Q6ZVH6 145 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 MIR7-3HGQ8N6C7 128 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 SNHG12Q9BXW3 62 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 C6orf48Q9UBA6 75 aa6.34□□□□□ -1.39
HNRNPC-220ENST00000555585 IFITM1P13164 125 aa6.33□□□□□ -1.4
HNRNPC-220ENST00000555585 FXYD2P54710 66 aa6.33□□□□□ -1.4
HNRNPC-220ENST00000555585 COX17Q14061 63 aa6.33□□□□□ -1.4
HNRNPC-220ENST00000555585 CARD19Q96LW7 228 aa6.33□□□□□ -1.4
HNRNPC-220ENST00000555585 DNAH6Q9C0G6 4158 aa6.32□□□□□ -1.4
HNRNPC-220ENST00000555585 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
HNRNPC-220ENST00000555585 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
HNRNPC-220ENST00000555585 LINC00308Q8TCZ7 52 aa6.32□□□□□ -1.4
HNRNPC-220ENST00000555585 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
HNRNPC-220ENST00000555585 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.31□□□□□ -1.4
HNRNPC-220ENST00000555585 LRCOL1A6NCL2 159 aa6.31□□□□□ -1.4
HNRNPC-220ENST00000555585 A6NDN8 102 aa6.31□□□□□ -1.4
HNRNPC-220ENST00000555585 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-220ENST00000555585 A4D1N5 150 aa6.3□□□□□ -1.4
HNRNPC-220ENST00000555585 SLPIP03973 132 aa6.3□□□□□ -1.4
HNRNPC-220ENST00000555585 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
HNRNPC-220ENST00000555585 SOSTDC1Q6X4U4 206 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms