RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 UBE2D4Q9Y2X8 147 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 CBY1Q9Y3M2 126 aa3.52□□□□□ -1.85
LINC01550-204ENST00000554822 TRGV2A0A075B6R0 118 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 TRAV8-6A0A0B4J262 113 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 MYMXA0A1B0GTQ4 84 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 TAX1BP3O14907 124 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 DNAH10OSP0CZ25 163 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 APOC4P55056 127 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 UBE2D3P61077 147 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 UBE2D2P62837 147 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 ZNRF2Q8NHG8 242 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 DEFB104AQ8WTQ1 72 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 FAM104AQ969W3 186 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 PRADC1Q9BSG0 188 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 GTSF1LQ9H1H1 148 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 CSDC2Q9Y534 153 aaKnown RBP3.51□□□□□ -1.85
LINC01550-204ENST00000554822 SACSQ9NZJ4 4579 aa3.51□□□□□ -1.85
LINC01550-204ENST00000554822 TRGV4A0A0C4DH28 118 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 TINCRA0A1B0GVN0 87 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 TMEM223A0PJW6 202 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 LYRM9A8MSI8 78 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 H3BRM9 83 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 LEPROTO15243 131 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 CCL25O15444 150 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 ZNF22P17026 224 aaPredicted RBP3.5□□□□□ -1.85
LINC01550-204ENST00000554822 TCTAP57738 103 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 TMEM170BQ5T4T1 132 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 FAM19A3Q7Z5A8 133 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 SBSPONQ8IVN8 264 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 TTTY13Q9BZ97 58 aa3.5□□□□□ -1.85
LINC01550-204ENST00000554822 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.49□□□□□ -1.85
LINC01550-204ENST00000554822 A0A0J9YXV3 536 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 IGKV2-29A2NJV5 120 aaPredicted RBP3.49□□□□□ -1.85
LINC01550-204ENST00000554822 ZNF815PA8K554 130 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 A8MU10 97 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 J3QQQ9 107 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 LINC00694P0DN24 101 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 EMP1P54849 157 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 VAMP3Q15836 100 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 C6orf226Q5I0X4 101 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 NTM-AS1Q6ZSK4 140 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 CEND1Q8N111 149 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 PLEKHB2Q96CS7 222 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 DYNC2H1Q8NCM8 4307 aaKnown RBP3.49□□□□□ -1.85
LINC01550-204ENST00000554822 DNAH1Q9P2D7 4330 aa3.49□□□□□ -1.85
LINC01550-204ENST00000554822 LOC100131303A0A0U1RQF7 123 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 A0A1B0GWB2 263 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 SMIM13P0DJ93 91 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 MIFP14174 115 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 LGALS3P17931 250 aaKnown RBP3.48□□□□□ -1.85
LINC01550-204ENST00000554822 UBE2D1P51668 147 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 CEMP1Q6PRD7 247 aaPredicted RBP3.48□□□□□ -1.85
LINC01550-204ENST00000554822 SCGB1D4Q6XE38 83 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 Q6ZUT4 128 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 GTF2H5Q6ZYL4 71 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 OR5A1Q8NGJ0 315 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 HIST1H4GQ99525 98 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 TMEM243Q9BU79 118 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 SPANXB1Q9NS25 103 aaPredicted RBP3.48□□□□□ -1.85
LINC01550-204ENST00000554822 PRO0255Q9UI72 69 aa3.48□□□□□ -1.85
LINC01550-204ENST00000554822 TRBV6-8A0A0A6YYG3 113 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 A0A0J9YY99 117 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 DEFB130BP0DP73 79 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 DEFB130AP0DP74 79 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 FXYD2P54710 66 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 TSPEAR-AS2P59090 65 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 HERVK_113P63121 156 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 EGFEM1PQ0D2K5 195 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 DEFB135Q30KP9 77 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 TMEM101Q96IK0 257 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 GEMIN7Q9H840 131 aaKnown RBP3.47□□□□□ -1.85
LINC01550-204ENST00000554822 CDC42SE2Q9NRR3 84 aa3.47□□□□□ -1.85
LINC01550-204ENST00000554822 UBE2L6O14933 153 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 IGHV3-30-3P0DP02 117 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 RBX1P62877 108 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 FAM222AQ5U5X8 452 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 AMMECR1LQ6DCA0 310 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 Q6ZVH6 145 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 C3orf56Q8N813 242 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 Q8NAQ8 132 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 ATP6V0E2Q8NHE4 81 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 VSIG2Q96IQ7 327 aa3.46□□□□□ -1.86
LINC01550-204ENST00000554822 NHP2Q9NX24 153 aaKnown RBP3.46□□□□□ -1.86
LINC01550-204ENST00000554822 A0A0J9YXY3 114 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 A0A1W2PPM0 123 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 TMEM238C9JI98 176 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 H3BUT2 72 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 K7EP34 96 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 K7ERU9 68 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 TIMM17BO60830 172 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 IGHV3-30P01768 117 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 ATP5G1P05496 136 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 SPART-AS1P0CW21 52 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 IGHV3-30-5P0DP03 117 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 DAD1P61803 113 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 C12orf74Q32Q52 190 aa3.45□□□□□ -1.86
LINC01550-204ENST00000554822 RNASE13Q5GAN3 156 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms