RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 SMIM11BQ8TCY0 68 aa6.7□□□□□ -1.34
SYNE2-213ENST00000554805 FAM19A3Q7Z5A8 133 aa6.7□□□□□ -1.34
SYNE2-213ENST00000554805 LINC00643Q86TS7 51 aa6.7□□□□□ -1.34
SYNE2-213ENST00000554805 LECT2O14960 151 aa6.69□□□□□ -1.34
SYNE2-213ENST00000554805 PF4P02776 101 aa6.69□□□□□ -1.34
SYNE2-213ENST00000554805 LINC01006Q8NI28 216 aa6.69□□□□□ -1.34
SYNE2-213ENST00000554805 GYPEP15421 78 aa6.69□□□□□ -1.34
SYNE2-213ENST00000554805 RPL28P46779 137 aaKnown RBP6.69□□□□□ -1.34
SYNE2-213ENST00000554805 A0A087WYN8 130 aa6.69□□□□□ -1.34
SYNE2-213ENST00000554805 SLPIP03973 132 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 FHL2Q14192 279 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 C14orf132Q9NPU4 83 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 NBEAL1Q6ZS30 2694 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 PDZD2O15018 2839 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 FAM222AQ5U5X8 452 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 SMCR5Q8TEV8 140 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
SYNE2-213ENST00000554805 PLAC8L1A1L4L8 177 aa6.67□□□□□ -1.34
SYNE2-213ENST00000554805 SS18Q15532 418 aa6.67□□□□□ -1.34
SYNE2-213ENST00000554805 SMIM20Q8N5G0 67 aa6.67□□□□□ -1.34
SYNE2-213ENST00000554805 IGHV3OR16-9A0A0B4J2B5 98 aa6.67□□□□□ -1.34
SYNE2-213ENST00000554805 TRBV7-7A0A0K0K1E9 115 aa6.67□□□□□ -1.34
SYNE2-213ENST00000554805 IBA57-AS1B1ANH7 110 aa6.67□□□□□ -1.34
SYNE2-213ENST00000554805 RNASE1P07998 156 aaKnown RBP6.67□□□□□ -1.34
SYNE2-213ENST00000554805 LINC00959A0A1B0GUT2 108 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 H0YGX0 51 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 IGKV3D-7A0A0C4DH55 119 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 WIPF1O43516 503 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 IGLV1-51P01701 117 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 STAB1Q9NY15 2570 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 A0A087WZ39 114 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 INAFM1C9JVW0 142 aa6.66□□□□□ -1.34
SYNE2-213ENST00000554805 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.34
SYNE2-213ENST00000554805 KRTAP1-3Q8IUG1 177 aa6.65□□□□□ -1.34
SYNE2-213ENST00000554805 IGLV10-54A0A075B6I4 117 aa6.65□□□□□ -1.35
SYNE2-213ENST00000554805 NCR3O14931 201 aa6.65□□□□□ -1.35
SYNE2-213ENST00000554805 IMUPQ9GZP8 106 aa6.64□□□□□ -1.35
SYNE2-213ENST00000554805 TENM1Q9UKZ4 2725 aa6.64□□□□□ -1.35
SYNE2-213ENST00000554805 COL6A5A8TX70 2615 aa6.64□□□□□ -1.35
SYNE2-213ENST00000554805 DEFB4AO15263 64 aa6.64□□□□□ -1.35
SYNE2-213ENST00000554805 NSD1Q96L73 2696 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-213ENST00000554805 PRR3P79522 188 aaKnown RBP6.63□□□□□ -1.35
SYNE2-213ENST00000554805 CSNK1G2-AS1Q8NCQ2 148 aa6.63□□□□□ -1.35
SYNE2-213ENST00000554805 C19orf73Q9NVV2 129 aa6.63□□□□□ -1.35
SYNE2-213ENST00000554805 LY6G6DO95868 133 aa6.63□□□□□ -1.35
SYNE2-213ENST00000554805 C9orf129Q5T035 196 aaKnown RBP6.63□□□□□ -1.35
SYNE2-213ENST00000554805 C22orf24Q9Y442 160 aa6.63□□□□□ -1.35
SYNE2-213ENST00000554805 ORMDL1Q9P0S3 153 aa6.62□□□□□ -1.35
SYNE2-213ENST00000554805 ANGP03950 147 aaKnown RBP6.62□□□□□ -1.35
SYNE2-213ENST00000554805 HTN3P15516 51 aa6.62□□□□□ -1.35
SYNE2-213ENST00000554805 LINC00269Q8N2A0 174 aa6.62□□□□□ -1.35
SYNE2-213ENST00000554805 PRO0255Q9UI72 69 aa6.61□□□□□ -1.35
SYNE2-213ENST00000554805 LINC00482Q8N8I6 264 aa6.6□□□□□ -1.35
SYNE2-213ENST00000554805 HIST1H4AP62805 103 aaKnown RBP6.6□□□□□ -1.35
SYNE2-213ENST00000554805 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
SYNE2-213ENST00000554805 FBN1P35555 2871 aaKnown RBP6.6□□□□□ -1.35
SYNE2-213ENST00000554805 TRRAPQ9Y4A5 3859 aa6.6□□□□□ -1.35
SYNE2-213ENST00000554805 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.35
SYNE2-213ENST00000554805 S100A7L2Q5SY68 101 aa6.59□□□□□ -1.35
SYNE2-213ENST00000554805 LINC00846Q9NV44 126 aa6.59□□□□□ -1.35
SYNE2-213ENST00000554805 DEFB135Q30KP9 77 aa6.59□□□□□ -1.36
SYNE2-213ENST00000554805 Q8IZM0 81 aa6.59□□□□□ -1.36
SYNE2-213ENST00000554805 CHCHD10Q8WYQ3 142 aaPredicted RBP6.59□□□□□ -1.36
SYNE2-213ENST00000554805 KIR2DL5BQ8NHK3 375 aa6.58□□□□□ -1.36
SYNE2-213ENST00000554805 C16orf95Q9H693 158 aa6.58□□□□□ -1.36
SYNE2-213ENST00000554805 UQCRQO14949 82 aa6.58□□□□□ -1.36
SYNE2-213ENST00000554805 CXCL5P42830 114 aa6.58□□□□□ -1.36
SYNE2-213ENST00000554805 Q8N3U1 123 aa6.58□□□□□ -1.36
SYNE2-213ENST00000554805 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
SYNE2-213ENST00000554805 KLK5Q9Y337 293 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-213ENST00000554805 A0A087WVE0 104 aa6.57□□□□□ -1.36
SYNE2-213ENST00000554805 A0A1B0GX51 115 aa6.57□□□□□ -1.36
SYNE2-213ENST00000554805 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
SYNE2-213ENST00000554805 DAD1P61803 113 aa6.57□□□□□ -1.36
SYNE2-213ENST00000554805 MGAM2Q2M2H8 2515 aa6.57□□□□□ -1.36
SYNE2-213ENST00000554805 ATOX1O00244 68 aa6.56□□□□□ -1.36
SYNE2-213ENST00000554805 REG3AQ06141 175 aa6.56□□□□□ -1.36
SYNE2-213ENST00000554805 A0A1B0GUV1 79 aa6.56□□□□□ -1.36
SYNE2-213ENST00000554805 CD164L2Q6UWJ8 174 aa6.56□□□□□ -1.36
SYNE2-213ENST00000554805 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
SYNE2-213ENST00000554805 X6R8D5 127 aa6.55□□□□□ -1.36
SYNE2-213ENST00000554805 COX7CP15954 63 aa6.55□□□□□ -1.36
SYNE2-213ENST00000554805 hADV29S1A0JD25 119 aa6.55□□□□□ -1.36
SYNE2-213ENST00000554805 EPM2AB3EWF7 344 aa6.55□□□□□ -1.36
SYNE2-213ENST00000554805 HILS1P60008 231 aa6.55□□□□□ -1.36
SYNE2-213ENST00000554805 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
SYNE2-213ENST00000554805 KRTAP1-1Q07627 177 aa6.54□□□□□ -1.36
SYNE2-213ENST00000554805 Q6JHZ5 121 aa6.54□□□□□ -1.36
SYNE2-213ENST00000554805 Q8N814 137 aa6.54□□□□□ -1.36
SYNE2-213ENST00000554805 LAMTOR3Q9UHA4 124 aa6.54□□□□□ -1.36
SYNE2-213ENST00000554805 JMJD7-PLA2G4BH0Y9G9 81 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 RPL18AQ02543 176 aaKnown RBP6.53□□□□□ -1.36
SYNE2-213ENST00000554805 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 SMIM9A6NGZ8 99 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 TMEM256-PLSCR3K7ERE1 68 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
SYNE2-213ENST00000554805 C6orf223Q8N319 242 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms