RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RNASE3P12724 160 aaKnown RBP2.99□□□□□ -1.93
ATXN3-228ENST00000554592 RPS20P60866 119 aaKnown RBP2.99□□□□□ -1.93
ATXN3-228ENST00000554592 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
ATXN3-228ENST00000554592 C2orf66Q6UXQ4 117 aa2.99□□□□□ -1.93
ATXN3-228ENST00000554592 GOLT1AQ6ZVE7 132 aa2.99□□□□□ -1.93
ATXN3-228ENST00000554592 TSKUQ8WUA8 353 aa2.99□□□□□ -1.93
ATXN3-228ENST00000554592 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
ATXN3-228ENST00000554592 SNHG12Q9BXW3 62 aa2.99□□□□□ -1.93
ATXN3-228ENST00000554592 EPDR1Q9UM22 224 aa2.99□□□□□ -1.93
ATXN3-228ENST00000554592 TRBV7-3A0A075B6L6 115 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 H7C1H1 209 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 DLEU1O43261 78 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 LTAP01374 205 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 S100A4P26447 101 aaKnown RBP2.98□□□□□ -1.93
ATXN3-228ENST00000554592 CTRLP40313 264 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-228ENST00000554592 FOXA3P55318 350 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-228ENST00000554592 UBE2D3P61077 147 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 UBE2D2P62837 147 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 GNG5P63218 68 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 MPV17L2Q567V2 206 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 PRR34Q9NV39 138 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 ZFP30Q9Y2G7 519 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 CBY1Q9Y3M2 126 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 MUC2Q02817 5179 aa2.98□□□□□ -1.93
ATXN3-228ENST00000554592 TRAV8-4A0A0B4J246 113 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 A0A1B0GXF2 115 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 GRIFINA4D1Z8 144 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 E9PLD3 99 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 NUPR1O60356 82 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 HSBP1O75506 76 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 P01737 135 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 HBBP68871 147 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 COX6A2Q02221 97 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 MAJINQ3KP22 176 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 SAPCD1Q5SSQ6 148 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 LINC00269Q8N2A0 174 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 GATD1Q8NB37 220 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 NUP35Q8NFH5 326 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 C18orf32Q8TCD1 76 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 RPP21Q9H633 154 aaKnown RBP2.97□□□□□ -1.93
ATXN3-228ENST00000554592 ST20Q9HBF5 79 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 PSORS1C2Q9UIG4 136 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 PSG8Q9UQ74 426 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 LAMTOR2Q9Y2Q5 125 aa2.97□□□□□ -1.93
ATXN3-228ENST00000554592 IGLV10-54A0A075B6I4 117 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 TRAV26-2A0A0B4J265 109 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 C19orf71A6NCJ1 209 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 ZNF25P17030 456 aaPredicted RBP2.96□□□□□ -1.94
ATXN3-228ENST00000554592 KRTDAPP60985 99 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 RBX1P62877 108 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 SPATA45Q537H7 98 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 TMEM97Q5BJF2 176 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 FAM74A4Q5TZK3 123 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 PRNTQ86SH4 94 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 TMEM191AQ9H0A3 160 aa2.96□□□□□ -1.94
ATXN3-228ENST00000554592 RNASE7Q9H1E1 156 aaKnown RBP2.96□□□□□ -1.94
ATXN3-228ENST00000554592 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 MUC21A0A0G2JKD1 596 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 FABP5P3A8MUU1 101 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 HIGD1CA8MV81 97 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 ARMS2P0C7Q2 107 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 REG3AQ06141 175 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 MRPL54Q6P161 138 aaKnown RBP2.95□□□□□ -1.94
ATXN3-228ENST00000554592 CLPSL2Q6UWE3 100 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 Q6ZN92 141 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 PPDPFQ9H3Y8 114 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 LINC00474Q9P2X8 69 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 PHLDA3Q9Y5J5 127 aa2.95□□□□□ -1.94
ATXN3-228ENST00000554592 A0A1B0GUT8 65 aa2.94□□□□□ -1.94
ATXN3-228ENST00000554592 H3BVH4 76 aa2.94□□□□□ -1.94
ATXN3-228ENST00000554592 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
ATXN3-228ENST00000554592 RPL32P62910 135 aaKnown RBP2.94□□□□□ -1.94
ATXN3-228ENST00000554592 PRR4Q16378 134 aa2.94□□□□□ -1.94
ATXN3-228ENST00000554592 NTM-AS1Q6ZSK4 140 aa2.94□□□□□ -1.94
ATXN3-228ENST00000554592 OR10AG1Q8NH19 301 aa2.94□□□□□ -1.94
ATXN3-228ENST00000554592 PKIGQ9Y2B9 76 aa2.94□□□□□ -1.94
ATXN3-228ENST00000554592 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 TRBV25-1A0A075B6N4 114 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 F2Z2F3 143 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 M0R381 172 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 SH2D1AO60880 128 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 PPBPP02775 128 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 NTF3P20783 257 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 CACNG7P62955 275 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 SEC11AP67812 179 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 RNASEKQ6P5S7 137 aaKnown RBP2.93□□□□□ -1.94
ATXN3-228ENST00000554592 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 FER1L6-AS1Q8NA97 138 aa2.93□□□□□ -1.94
ATXN3-228ENST00000554592 A0A096LNI7 61 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms