RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 A0A087WZ39 114 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 PAX4O43316 350 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 LY6G6DO95868 133 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 OR13C6PQ8NH95 151 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 TRAV13-2A0A0B4J235 113 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 Q8N3U1 123 aa10.91□□□□□ -0.66
ARHGEF40-203ENST00000554514 TENM1Q9UKZ4 2725 aa10.9□□□□□ -0.66
ARHGEF40-203ENST00000554514 IGLV10-54A0A075B6I4 117 aa10.9□□□□□ -0.66
ARHGEF40-203ENST00000554514 KIR2DL5BQ8NHK3 375 aa10.9□□□□□ -0.66
ARHGEF40-203ENST00000554514 CCDC179H3BU77 68 aa10.89□□□□□ -0.67
ARHGEF40-203ENST00000554514 SMIM11BQ8TCY0 68 aa10.88□□□□□ -0.67
ARHGEF40-203ENST00000554514 SS18Q15532 418 aa10.88□□□□□ -0.67
ARHGEF40-203ENST00000554514 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
ARHGEF40-203ENST00000554514 OTOGQ6ZRI0 2925 aa10.88□□□□□ -0.67
ARHGEF40-203ENST00000554514 ATP5G1P05496 136 aa10.88□□□□□ -0.67
ARHGEF40-203ENST00000554514 INAFM1C9JVW0 142 aa10.87□□□□□ -0.67
ARHGEF40-203ENST00000554514 A0A087WYN8 130 aa10.87□□□□□ -0.67
ARHGEF40-203ENST00000554514 HTN3P15516 51 aa10.87□□□□□ -0.67
ARHGEF40-203ENST00000554514 LINC00269Q8N2A0 174 aa10.87□□□□□ -0.67
ARHGEF40-203ENST00000554514 ATRQ13535 2644 aa10.87□□□□□ -0.67
ARHGEF40-203ENST00000554514 TRACP01848 142 aa10.86□□□□□ -0.67
ARHGEF40-203ENST00000554514 IBA57-AS1B1ANH7 110 aa10.86□□□□□ -0.67
ARHGEF40-203ENST00000554514 RPL28P46779 137 aaKnown RBP10.85□□□□□ -0.67
ARHGEF40-203ENST00000554514 DEFB121Q5J5C9 76 aa10.85□□□□□ -0.67
ARHGEF40-203ENST00000554514 TRRAPQ9Y4A5 3859 aa10.85□□□□□ -0.67
ARHGEF40-203ENST00000554514 NDUFV3P56181 108 aaKnown RBP10.85□□□□□ -0.67
ARHGEF40-203ENST00000554514 LINC00612Q8N6U2 182 aa10.85□□□□□ -0.67
ARHGEF40-203ENST00000554514 DNAL4O96015 105 aa10.84□□□□□ -0.67
ARHGEF40-203ENST00000554514 ANGP03950 147 aaKnown RBP10.84□□□□□ -0.67
ARHGEF40-203ENST00000554514 NHLRC4P0CG21 123 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF40-203ENST00000554514 PRR3P79522 188 aaKnown RBP10.84□□□□□ -0.67
ARHGEF40-203ENST00000554514 IGHV4-28A0A0C4DH34 117 aa10.83□□□□□ -0.68
ARHGEF40-203ENST00000554514 C3orf56Q8N813 242 aa10.83□□□□□ -0.68
ARHGEF40-203ENST00000554514 C22orf24Q9Y442 160 aa10.83□□□□□ -0.68
ARHGEF40-203ENST00000554514 DAD1P61803 113 aa10.82□□□□□ -0.68
ARHGEF40-203ENST00000554514 SLPIP03973 132 aa10.82□□□□□ -0.68
ARHGEF40-203ENST00000554514 MALP21145 153 aa10.82□□□□□ -0.68
ARHGEF40-203ENST00000554514 C9orf66Q5T8R8 295 aa10.82□□□□□ -0.68
ARHGEF40-203ENST00000554514 GAGE2AQ6NT46 116 aa10.82□□□□□ -0.68
ARHGEF40-203ENST00000554514 CELA1Q9UNI1 258 aa10.82□□□□□ -0.68
ARHGEF40-203ENST00000554514 FAM240AA0A1B0GVK7 77 aa10.81□□□□□ -0.68
ARHGEF40-203ENST00000554514 LECT2O14960 151 aa10.81□□□□□ -0.68
ARHGEF40-203ENST00000554514 C9orf116Q5BN46 136 aaPredicted RBP10.81□□□□□ -0.68
ARHGEF40-203ENST00000554514 A0A1B0GUV1 79 aa10.81□□□□□ -0.68
ARHGEF40-203ENST00000554514 SMIM9A6NGZ8 99 aa10.81□□□□□ -0.68
ARHGEF40-203ENST00000554514 NSD1Q96L73 2696 aaPredicted RBP10.81□□□□□ -0.68
ARHGEF40-203ENST00000554514 C9orf129Q5T035 196 aaKnown RBP10.8□□□□□ -0.68
ARHGEF40-203ENST00000554514 SMCR5Q8TEV8 140 aa10.8□□□□□ -0.68
ARHGEF40-203ENST00000554514 CHCHD10Q8WYQ3 142 aaPredicted RBP10.8□□□□□ -0.68
ARHGEF40-203ENST00000554514 KMT2BQ9UMN6 2715 aaPredicted RBP10.79□□□□□ -0.68
ARHGEF40-203ENST00000554514 LYRM9A8MSI8 78 aa10.79□□□□□ -0.68
ARHGEF40-203ENST00000554514 Q8IZM0 81 aa10.78□□□□□ -0.68
ARHGEF40-203ENST00000554514 LINC00526Q96FQ7 95 aa10.78□□□□□ -0.68
ARHGEF40-203ENST00000554514 REG3AQ06141 175 aa10.78□□□□□ -0.68
ARHGEF40-203ENST00000554514 C14orf132Q9NPU4 83 aa10.77□□□□□ -0.69
ARHGEF40-203ENST00000554514 APOC4P55056 127 aa10.76□□□□□ -0.69
ARHGEF40-203ENST00000554514 Q6Q795 121 aa10.76□□□□□ -0.69
ARHGEF40-203ENST00000554514 TEP1Q99973 2627 aaKnown RBP10.76□□□□□ -0.69
ARHGEF40-203ENST00000554514 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
ARHGEF40-203ENST00000554514 CD164L2Q6UWJ8 174 aa10.75□□□□□ -0.69
ARHGEF40-203ENST00000554514 H0YGX0 51 aa10.74□□□□□ -0.69
ARHGEF40-203ENST00000554514 LOC107984640A0A0U1RRK4 108 aa10.74□□□□□ -0.69
ARHGEF40-203ENST00000554514 NCR3O14931 201 aa10.74□□□□□ -0.69
ARHGEF40-203ENST00000554514 ACYP1P07311 99 aa10.74□□□□□ -0.69
ARHGEF40-203ENST00000554514 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
ARHGEF40-203ENST00000554514 C6orf223Q8N319 242 aa10.74□□□□□ -0.69
ARHGEF40-203ENST00000554514 KIAA0087Q14695 138 aa10.73□□□□□ -0.69
ARHGEF40-203ENST00000554514 HIVEP1P15822 2718 aa10.73□□□□□ -0.69
ARHGEF40-203ENST00000554514 WIPF1O43516 503 aa10.72□□□□□ -0.69
ARHGEF40-203ENST00000554514 Q8NAQ8 132 aa10.72□□□□□ -0.69
ARHGEF40-203ENST00000554514 FAM236AA0A1B0GUQ0 79 aa10.71□□□□□ -0.69
ARHGEF40-203ENST00000554514 FAM236BA0A1B0GV22 79 aa10.71□□□□□ -0.69
ARHGEF40-203ENST00000554514 KLK12Q9UKR0 248 aa10.71□□□□□ -0.69
ARHGEF40-203ENST00000554514 C10orf25Q5T742 122 aa10.7□□□□□ -0.7
ARHGEF40-203ENST00000554514 TRBV7-7A0A0K0K1E9 115 aa10.7□□□□□ -0.7
ARHGEF40-203ENST00000554514 IGHV4-30-4P0DP06 118 aa10.7□□□□□ -0.7
ARHGEF40-203ENST00000554514 SPART-AS1P0CW21 52 aa10.69□□□□□ -0.7
ARHGEF40-203ENST00000554514 UNQ6190/PRO20217Q6UXQ8 127 aa10.69□□□□□ -0.7
ARHGEF40-203ENST00000554514 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
ARHGEF40-203ENST00000554514 Q8NDZ9 215 aa10.69□□□□□ -0.7
ARHGEF40-203ENST00000554514 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
ARHGEF40-203ENST00000554514 SPAG11BQ08648 103 aa10.68□□□□□ -0.7
ARHGEF40-203ENST00000554514 MIFP14174 115 aa10.68□□□□□ -0.7
ARHGEF40-203ENST00000554514 ORMDL1Q9P0S3 153 aa10.68□□□□□ -0.7
ARHGEF40-203ENST00000554514 CXCL5P42830 114 aa10.66□□□□□ -0.7
ARHGEF40-203ENST00000554514 S100A7L2Q5SY68 101 aa10.66□□□□□ -0.7
ARHGEF40-203ENST00000554514 RETNQ9HD89 108 aa10.66□□□□□ -0.7
ARHGEF40-203ENST00000554514 FAM19A5Q7Z5A7 132 aaPredicted RBP10.65□□□□□ -0.7
ARHGEF40-203ENST00000554514 LINC01561Q8N1V8 128 aa10.65□□□□□ -0.7
ARHGEF40-203ENST00000554514 C6orf99Q4VX62 202 aa10.65□□□□□ -0.7
ARHGEF40-203ENST00000554514 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
ARHGEF40-203ENST00000554514 LELP1Q5T871 98 aa10.64□□□□□ -0.71
ARHGEF40-203ENST00000554514 SDIM1Q6ZPB5 146 aa10.64□□□□□ -0.71
ARHGEF40-203ENST00000554514 CYSRT1A8MQ03 144 aa10.64□□□□□ -0.71
ARHGEF40-203ENST00000554514 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
ARHGEF40-203ENST00000554514 COX17Q14061 63 aa10.64□□□□□ -0.71
ARHGEF40-203ENST00000554514 LINC00846Q9NV44 126 aa10.63□□□□□ -0.71
ARHGEF40-203ENST00000554514 Q8N814 137 aa10.63□□□□□ -0.71
ARHGEF40-203ENST00000554514 KLK5Q9Y337 293 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF40-203ENST00000554514 OXLD1Q5BKU9 147 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms