RNA–Protein interactions for RNA: ENST00000554498.1

SLC38A6-219, Transcript of solute carrier family 38 member 6, humanhuman

TSL 3

Gene SLC38A6, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-219ENST00000554498 LCN9Q8WX39 176 aa-0.93□□□□□ -2.56
SLC38A6-219ENST00000554498 COPS9Q8WXC6 57 aa-0.93□□□□□ -2.56
SLC38A6-219ENST00000554498 FAIMQ9NVQ4 179 aa-0.93□□□□□ -2.56
SLC38A6-219ENST00000554498 LINC00474Q9P2X8 69 aa-0.93□□□□□ -2.56
SLC38A6-219ENST00000554498 CPSF1Q10570 1443 aaKnown RBP-0.93□□□□□ -2.56
SLC38A6-219ENST00000554498 NKTRP30414 1462 aaKnown RBP-0.93□□□□□ -2.56
SLC38A6-219ENST00000554498 LAMA3Q16787 3333 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 KALRNO60229 2985 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 CEP152O94986 1710 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 XRN1Q8IZH2 1706 aaKnown RBP-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 TROQ12816 1431 aaPredicted RBP-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 SMG6Q86US8 1419 aaKnown RBP-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 LOC100130705A0A1B0GUX0 176 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 SSSCA1O60232 199 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 AKAP14Q86UN6 197 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 FAM223AQ8IWN6 122 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 PYDC1Q8WXC3 89 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 ANP32BQ92688 251 aaKnown RBP-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 PPP3R2Q96LZ3 170 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 COPZ2Q9P299 210 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 ARL2-SNX15V9GYD0 113 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 SHROOM2Q13796 1616 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 QRICH2Q9H0J4 1663 aa-0.94□□□□□ -2.56
SLC38A6-219ENST00000554498 PDCD11Q14690 1871 aaKnown RBP-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 NBEAQ8NFP9 2946 aa-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 ANKRD36A6QL64 1941 aa-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 SMIM21Q3B7S5 101 aa-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 COMMD6Q7Z4G1 85 aa-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 LZICQ8WZA0 190 aa-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 SNRNP25Q9BV90 132 aaKnown RBP-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 PRO1933Q9H354 126 aa-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 ANK3Q12955 4377 aaKnown RBP-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 SLIT1O75093 1534 aa-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 APOBP04114 4563 aaKnown RBP-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 GCN1Q92616 2671 aaKnown RBP-0.95□□□□□ -2.56
SLC38A6-219ENST00000554498 UTP20O75691 2785 aaKnown RBP-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 RIF1Q5UIP0 2472 aaKnown RBP-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 ROBO1Q9Y6N7 1651 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 ADGRL2O95490 1459 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 CCDC141Q6ZP82 1450 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 PLEKHH2Q8IVE3 1493 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 H0YGG7 62 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 I3L3M4 83 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 ARPC4P59998 168 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 UBE2D3P61077 147 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 UBE2D2P62837 147 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 BTG2P78543 158 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 DR1Q01658 176 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 LELP1Q5T871 98 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 C5orf38Q86SI9 138 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 NUP188Q5SRE5 1749 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 EHBP1L1Q8N3D4 1523 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 PLECQ15149 4684 aaKnown RBP-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 FOCADQ5VW36 1801 aa-0.96□□□□□ -2.56
SLC38A6-219ENST00000554498 SCN7AQ01118 1682 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 PHLPP1O60346 1717 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 COL14A1Q05707 1796 aaKnown RBP-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 SEC11AP67812 179 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 Q56UQ5 140 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 MEIG1Q5JSS6 88 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 C8orf59Q8N0T1 100 aaPredicted RBP-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 LINC00846Q9NV44 126 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 UQCR10Q9UDW1 63 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 A0A0C4DFX4 3053 aa-0.97□□□□□ -2.56
SLC38A6-219ENST00000554498 CEP290O15078 2479 aa-0.97□□□□□ -2.57
SLC38A6-219ENST00000554498 RELNP78509 3460 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 A0A1B0GWA3 101 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 H3BNG1 76 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 CATR1Q13166 79 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 ARL11Q969Q4 196 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 PFDN5Q99471 154 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 MRPL34Q9BQ48 92 aaKnown RBP-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 WDR87Q6ZQQ6 2873 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 RYR2Q92736 4967 aa-0.98□□□□□ -2.57
SLC38A6-219ENST00000554498 NLRP1Q9C000 1473 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 NBEAL2Q6ZNJ1 2754 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 CICQ96RK0 1608 aaPredicted RBP-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 A0A1B0GU69 56 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 FAM223BA6NKX1 122 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 MIF4GDA9UHW6 222 aaKnown RBP-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 APOC2P02655 101 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 C9orf153Q5TBE3 101 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 WFDC13Q8IUB5 93 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 KIAA1551Q9HCM1 1747 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 DNAH1Q9P2D7 4330 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 NCOA3Q9Y6Q9 1424 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 MRC2Q9UBG0 1479 aa-0.99□□□□□ -2.57
SLC38A6-219ENST00000554498 DIP2CQ9Y2E4 1556 aa-1□□□□□ -2.57
SLC38A6-219ENST00000554498 OOSP1A8MZH6 123 aa-1□□□□□ -2.57
SLC38A6-219ENST00000554498 CCL22O00626 93 aa-1□□□□□ -2.57
SLC38A6-219ENST00000554498 SAA2P0DJI9 122 aaPredicted RBP-1□□□□□ -2.57
SLC38A6-219ENST00000554498 SELENOWP63302 87 aa-1□□□□□ -2.57
SLC38A6-219ENST00000554498 HEPN1Q6WQI6 88 aa-1□□□□□ -2.57
SLC38A6-219ENST00000554498 LINC00470Q9BZP3 86 aa-1□□□□□ -2.57
SLC38A6-219ENST00000554498 CDKN2A-AS1Q9UH64 79 aa-1□□□□□ -2.57
SLC38A6-219ENST00000554498 USP9XQ93008 2570 aaPredicted RBP-1□□□□□ -2.57
SLC38A6-219ENST00000554498 EDC4Q6P2E9 1401 aaKnown RBP-1□□□□□ -2.57
SLC38A6-219ENST00000554498 LRRC37AA6NMS7 1700 aa-1.01□□□□□ -2.57
SLC38A6-219ENST00000554498 F6UZH7 168 aa-1.01□□□□□ -2.57
SLC38A6-219ENST00000554498 GNG11P61952 73 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms