RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 SLPIP03973 132 aa11.95□□□□□ -0.5
PPP4R3A-202ENST00000554390 CDC42SE2Q9NRR3 84 aa11.95□□□□□ -0.5
PPP4R3A-202ENST00000554390 H0YGX0 51 aa11.95□□□□□ -0.5
PPP4R3A-202ENST00000554390 HRCT1Q6UXD1 115 aa11.94□□□□□ -0.5
PPP4R3A-202ENST00000554390 DSCR9P59020 149 aa11.94□□□□□ -0.5
PPP4R3A-202ENST00000554390 Q5XG85 94 aa11.94□□□□□ -0.5
PPP4R3A-202ENST00000554390 FHL2Q14192 279 aa11.94□□□□□ -0.5
PPP4R3A-202ENST00000554390 LINC00158P58513 81 aa11.93□□□□□ -0.5
PPP4R3A-202ENST00000554390 HILS1P60008 231 aa11.93□□□□□ -0.5
PPP4R3A-202ENST00000554390 UBR5O95071 2799 aaPredicted RBP11.93□□□□□ -0.5
PPP4R3A-202ENST00000554390 RPL36AP83881 106 aaKnown RBP11.92□□□□□ -0.5
PPP4R3A-202ENST00000554390 RPL36ALQ969Q0 106 aaKnown RBP11.92□□□□□ -0.5
PPP4R3A-202ENST00000554390 A8MTW9 85 aa11.91□□□□□ -0.5
PPP4R3A-202ENST00000554390 CCL18P55774 89 aa11.91□□□□□ -0.5
PPP4R3A-202ENST00000554390 COX7B2Q8TF08 81 aa11.91□□□□□ -0.5
PPP4R3A-202ENST00000554390 J3QLI3 93 aa11.91□□□□□ -0.5
PPP4R3A-202ENST00000554390 PFN2P35080 140 aa11.91□□□□□ -0.5
PPP4R3A-202ENST00000554390 WFDC9Q8NEX5 89 aa11.91□□□□□ -0.5
PPP4R3A-202ENST00000554390 TRGV2A0A075B6R0 118 aa11.9□□□□□ -0.5
PPP4R3A-202ENST00000554390 CLPSL2Q6UWE3 100 aa11.9□□□□□ -0.5
PPP4R3A-202ENST00000554390 K7EQD1 137 aa11.89□□□□□ -0.51
PPP4R3A-202ENST00000554390 GHRHP01286 108 aa11.89□□□□□ -0.51
PPP4R3A-202ENST00000554390 TENM4Q6N022 2769 aa11.89□□□□□ -0.51
PPP4R3A-202ENST00000554390 A0A096LPF7 62 aa11.88□□□□□ -0.51
PPP4R3A-202ENST00000554390 SS18Q15532 418 aa11.88□□□□□ -0.51
PPP4R3A-202ENST00000554390 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
PPP4R3A-202ENST00000554390 CCKP06307 115 aa11.88□□□□□ -0.51
PPP4R3A-202ENST00000554390 TRAV23DV6A0A075B6W5 121 aa11.88□□□□□ -0.51
PPP4R3A-202ENST00000554390 UBE2L6O14933 153 aa11.88□□□□□ -0.51
PPP4R3A-202ENST00000554390 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
PPP4R3A-202ENST00000554390 ORMDL1Q9P0S3 153 aa11.87□□□□□ -0.51
PPP4R3A-202ENST00000554390 PAX4O43316 350 aa11.87□□□□□ -0.51
PPP4R3A-202ENST00000554390 BBC3Q96PG8 261 aaPredicted RBP11.87□□□□□ -0.51
PPP4R3A-202ENST00000554390 FSHBP01225 129 aa11.86□□□□□ -0.51
PPP4R3A-202ENST00000554390 FAM19A1Q7Z5A9 133 aa11.85□□□□□ -0.51
PPP4R3A-202ENST00000554390 ENHOQ6UWT2 76 aa11.84□□□□□ -0.51
PPP4R3A-202ENST00000554390 TRBV10-1A0A0K0K1A3 114 aa11.83□□□□□ -0.52
PPP4R3A-202ENST00000554390 NDUFC2O95298 119 aa11.83□□□□□ -0.52
PPP4R3A-202ENST00000554390 DEFB130BP0DP73 79 aa11.83□□□□□ -0.52
PPP4R3A-202ENST00000554390 DEFB130AP0DP74 79 aa11.83□□□□□ -0.52
PPP4R3A-202ENST00000554390 S100A7L2Q5SY68 101 aa11.83□□□□□ -0.52
PPP4R3A-202ENST00000554390 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
PPP4R3A-202ENST00000554390 TMEM243Q9BU79 118 aa11.83□□□□□ -0.52
PPP4R3A-202ENST00000554390 CCL24O00175 119 aa11.82□□□□□ -0.52
PPP4R3A-202ENST00000554390 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
PPP4R3A-202ENST00000554390 ESM1Q9NQ30 184 aa11.82□□□□□ -0.52
PPP4R3A-202ENST00000554390 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
PPP4R3A-202ENST00000554390 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
PPP4R3A-202ENST00000554390 FASNP49327 2511 aaKnown RBP11.81□□□□□ -0.52
PPP4R3A-202ENST00000554390 IBA57-AS1B1ANH7 110 aa11.81□□□□□ -0.52
PPP4R3A-202ENST00000554390 PRR3P79522 188 aaKnown RBP11.81□□□□□ -0.52
PPP4R3A-202ENST00000554390 WFDC11Q8NEX6 87 aa11.81□□□□□ -0.52
PPP4R3A-202ENST00000554390 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
PPP4R3A-202ENST00000554390 TENM1Q9UKZ4 2725 aa11.79□□□□□ -0.52
PPP4R3A-202ENST00000554390 ATP5EP2Q5VTU8 51 aa11.79□□□□□ -0.52
PPP4R3A-202ENST00000554390 DNAJC9-AS1A6NH13 148 aa11.79□□□□□ -0.52
PPP4R3A-202ENST00000554390 JMJD7-PLA2G4BH0Y9G9 81 aa11.79□□□□□ -0.52
PPP4R3A-202ENST00000554390 XCL1P47992 114 aa11.78□□□□□ -0.52
PPP4R3A-202ENST00000554390 HELZ2Q9BYK8 2649 aaKnown RBP11.78□□□□□ -0.52
PPP4R3A-202ENST00000554390 FAM236DA0A1B0GTK5 79 aa11.78□□□□□ -0.52
PPP4R3A-202ENST00000554390 FAM236CP0DP71 79 aa11.78□□□□□ -0.52
PPP4R3A-202ENST00000554390 IGHV3OR16-9A0A0B4J2B5 98 aa11.77□□□□□ -0.52
PPP4R3A-202ENST00000554390 PLAC8L1A1L4L8 177 aa11.77□□□□□ -0.52
PPP4R3A-202ENST00000554390 LY6G6DO95868 133 aa11.77□□□□□ -0.52
PPP4R3A-202ENST00000554390 LYPD5Q6UWN5 251 aa11.77□□□□□ -0.53
PPP4R3A-202ENST00000554390 Q8N3U1 123 aa11.77□□□□□ -0.53
PPP4R3A-202ENST00000554390 IL17DQ8TAD2 202 aa11.77□□□□□ -0.53
PPP4R3A-202ENST00000554390 HECTD1Q9ULT8 2610 aa11.77□□□□□ -0.53
PPP4R3A-202ENST00000554390 DEFB4AO15263 64 aa11.76□□□□□ -0.53
PPP4R3A-202ENST00000554390 LINC00167Q96N53 147 aa11.76□□□□□ -0.53
PPP4R3A-202ENST00000554390 TRRAPQ9Y4A5 3859 aa11.75□□□□□ -0.53
PPP4R3A-202ENST00000554390 Q8N814 137 aa11.75□□□□□ -0.53
PPP4R3A-202ENST00000554390 DEFB113Q30KQ7 82 aa11.75□□□□□ -0.53
PPP4R3A-202ENST00000554390 UBL5Q9BZL1 73 aa11.75□□□□□ -0.53
PPP4R3A-202ENST00000554390 IGLV10-54A0A075B6I4 117 aa11.74□□□□□ -0.53
PPP4R3A-202ENST00000554390 TMEM256-PLSCR3K7ERE1 68 aa11.74□□□□□ -0.53
PPP4R3A-202ENST00000554390 RNASE1P07998 156 aaKnown RBP11.74□□□□□ -0.53
PPP4R3A-202ENST00000554390 ATRQ13535 2644 aa11.73□□□□□ -0.53
PPP4R3A-202ENST00000554390 A0A087WZ39 114 aa11.73□□□□□ -0.53
PPP4R3A-202ENST00000554390 TRBV10-3A0A0K0K1G6 114 aa11.73□□□□□ -0.53
PPP4R3A-202ENST00000554390 MRAPQ8TCY5 172 aa11.73□□□□□ -0.53
PPP4R3A-202ENST00000554390 PKD1L1Q8TDX9 2849 aa11.72□□□□□ -0.53
PPP4R3A-202ENST00000554390 H7BZZ5 65 aa11.72□□□□□ -0.53
PPP4R3A-202ENST00000554390 C6orf226Q5I0X4 101 aa11.72□□□□□ -0.53
PPP4R3A-202ENST00000554390 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
PPP4R3A-202ENST00000554390 PDZD2O15018 2839 aa11.71□□□□□ -0.53
PPP4R3A-202ENST00000554390 TEP1Q99973 2627 aaKnown RBP11.71□□□□□ -0.54
PPP4R3A-202ENST00000554390 SERP1Q9Y6X1 66 aa11.7□□□□□ -0.54
PPP4R3A-202ENST00000554390 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
PPP4R3A-202ENST00000554390 C9orf116Q5BN46 136 aaPredicted RBP11.7□□□□□ -0.54
PPP4R3A-202ENST00000554390 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
PPP4R3A-202ENST00000554390 TMEM86BQ8N661 226 aa11.7□□□□□ -0.54
PPP4R3A-202ENST00000554390 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
PPP4R3A-202ENST00000554390 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
PPP4R3A-202ENST00000554390 KRTAP1-3Q8IUG1 177 aa11.68□□□□□ -0.54
PPP4R3A-202ENST00000554390 TRAV7A0A075B6U4 112 aa11.67□□□□□ -0.54
PPP4R3A-202ENST00000554390 OTOGQ6ZRI0 2925 aa11.67□□□□□ -0.54
PPP4R3A-202ENST00000554390 LINC01006Q8NI28 216 aa11.67□□□□□ -0.54
PPP4R3A-202ENST00000554390 ANK3Q12955 4377 aaKnown RBP11.67□□□□□ -0.54
PPP4R3A-202ENST00000554390 GYPEP15421 78 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms