RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 IFI27P40305 119 aaPredicted RBP7.61□□□□□ -1.19
PRPF39-204ENST00000553605 NKAPP1Q8N9T2 125 aa7.61□□□□□ -1.19
PRPF39-204ENST00000553605 Q8NBF4 154 aa7.61□□□□□ -1.19
PRPF39-204ENST00000553605 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
PRPF39-204ENST00000553605 IGLV4-3A0A075B6K6 122 aa7.6□□□□□ -1.19
PRPF39-204ENST00000553605 TRBV24-1A0A075B6N3 115 aa7.6□□□□□ -1.19
PRPF39-204ENST00000553605 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
PRPF39-204ENST00000553605 KANTRA0A1W2PQU2 76 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 LINC00862A6NCI5 91 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 SMLR1H3BR10 107 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 RIGQ13278 110 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 CBLN2Q8IUK8 224 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 TMEM141Q96I45 108 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 SMIM2Q9BVW6 85 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 GNB1LQ9BYB4 327 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 PYGO1Q9Y3Y4 419 aa7.59□□□□□ -1.19
PRPF39-204ENST00000553605 SCO1O75880 301 aa7.58□□□□□ -1.2
PRPF39-204ENST00000553605 PCOTHQ58A44 107 aa7.58□□□□□ -1.2
PRPF39-204ENST00000553605 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
PRPF39-204ENST00000553605 TEX43Q6ZNM6 134 aa7.58□□□□□ -1.2
PRPF39-204ENST00000553605 TMEM126AQ9H061 195 aa7.58□□□□□ -1.2
PRPF39-204ENST00000553605 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
PRPF39-204ENST00000553605 TMEM238C9JI98 176 aa7.57□□□□□ -1.2
PRPF39-204ENST00000553605 CKS2P33552 79 aa7.57□□□□□ -1.2
PRPF39-204ENST00000553605 EIF5A2Q9GZV4 153 aaKnown RBP7.57□□□□□ -1.2
PRPF39-204ENST00000553605 FAM19A2Q8N3H0 131 aa7.56□□□□□ -1.2
PRPF39-204ENST00000553605 SPRR4Q96PI1 79 aa7.56□□□□□ -1.2
PRPF39-204ENST00000553605 C2orf88Q9BSF0 95 aa7.56□□□□□ -1.2
PRPF39-204ENST00000553605 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
PRPF39-204ENST00000553605 USH2AO75445 5202 aa7.56□□□□□ -1.2
PRPF39-204ENST00000553605 TAGLN2P37802 199 aaKnown RBP7.55□□□□□ -1.2
PRPF39-204ENST00000553605 ZC2HC1BQ5TFG8 222 aa7.55□□□□□ -1.2
PRPF39-204ENST00000553605 Q8N377 158 aa7.55□□□□□ -1.2
PRPF39-204ENST00000553605 CXCL5P42830 114 aa7.54□□□□□ -1.2
PRPF39-204ENST00000553605 HMSDA8MTL9 139 aa7.53□□□□□ -1.2
PRPF39-204ENST00000553605 M0R378 163 aa7.53□□□□□ -1.2
PRPF39-204ENST00000553605 RAB5AP20339 215 aa7.53□□□□□ -1.2
PRPF39-204ENST00000553605 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
PRPF39-204ENST00000553605 RAB5BP61020 215 aa7.52□□□□□ -1.21
PRPF39-204ENST00000553605 FCGBPQ9Y6R7 5405 aaPredicted RBP7.52□□□□□ -1.21
PRPF39-204ENST00000553605 SLC25A20O43772 301 aa7.51□□□□□ -1.21
PRPF39-204ENST00000553605 NPYP01303 97 aa7.51□□□□□ -1.21
PRPF39-204ENST00000553605 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
PRPF39-204ENST00000553605 AMELXQ99217 191 aa7.51□□□□□ -1.21
PRPF39-204ENST00000553605 VCX2Q9H322 139 aa7.51□□□□□ -1.21
PRPF39-204ENST00000553605 OSTCQ9NRP0 149 aa7.51□□□□□ -1.21
PRPF39-204ENST00000553605 CDKN2A-AS1Q9UH64 79 aa7.51□□□□□ -1.21
PRPF39-204ENST00000553605 ZNF706Q9Y5V0 76 aaPredicted RBP7.51□□□□□ -1.21
PRPF39-204ENST00000553605 D6R8Y8 96 aa7.5□□□□□ -1.21
PRPF39-204ENST00000553605 TMEM250H0YL14 139 aa7.5□□□□□ -1.21
PRPF39-204ENST00000553605 C2orf66Q6UXQ4 117 aa7.5□□□□□ -1.21
PRPF39-204ENST00000553605 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
PRPF39-204ENST00000553605 FAM19A3Q7Z5A8 133 aa7.5□□□□□ -1.21
PRPF39-204ENST00000553605 HERVK_113P63121 156 aa7.49□□□□□ -1.21
PRPF39-204ENST00000553605 CEBPGP53567 150 aa7.48□□□□□ -1.21
PRPF39-204ENST00000553605 LINC01551Q86U37 167 aa7.48□□□□□ -1.21
PRPF39-204ENST00000553605 NAT8BQ9UHF3 227 aa7.48□□□□□ -1.21
PRPF39-204ENST00000553605 V9GYV3 84 aa7.48□□□□□ -1.21
PRPF39-204ENST00000553605 SEC11AP67812 179 aa7.47□□□□□ -1.21
PRPF39-204ENST00000553605 GEMIN7Q9H840 131 aaKnown RBP7.47□□□□□ -1.21
PRPF39-204ENST00000553605 KRTAP4-16G5E9R7 235 aaPredicted RBP7.46□□□□□ -1.22
PRPF39-204ENST00000553605 VPREB1P12018 145 aa7.46□□□□□ -1.22
PRPF39-204ENST00000553605 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
PRPF39-204ENST00000553605 CYSLTR1Q9Y271 337 aa7.45□□□□□ -1.22
PRPF39-204ENST00000553605 A0A1B0GW15 77 aa7.44□□□□□ -1.22
PRPF39-204ENST00000553605 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
PRPF39-204ENST00000553605 PPBPP02775 128 aa7.44□□□□□ -1.22
PRPF39-204ENST00000553605 RPL24P83731 157 aaKnown RBP7.44□□□□□ -1.22
PRPF39-204ENST00000553605 FAM74A3Q4VXF1 159 aa7.44□□□□□ -1.22
PRPF39-204ENST00000553605 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
PRPF39-204ENST00000553605 PDZD11Q5EBL8 140 aa7.43□□□□□ -1.22
PRPF39-204ENST00000553605 SSBP3-AS1Q7Z2R9 100 aa7.43□□□□□ -1.22
PRPF39-204ENST00000553605 F8W036 122 aa7.42□□□□□ -1.22
PRPF39-204ENST00000553605 NPSP0C0P6 89 aa7.42□□□□□ -1.22
PRPF39-204ENST00000553605 MOBPQ13875 183 aa7.42□□□□□ -1.22
PRPF39-204ENST00000553605 IGLV9-49A0A0B4J1Y8 123 aa7.41□□□□□ -1.22
PRPF39-204ENST00000553605 IGIPA6NJ69 53 aa7.41□□□□□ -1.22
PRPF39-204ENST00000553605 PFN2P35080 140 aa7.41□□□□□ -1.22
PRPF39-204ENST00000553605 RAB14P61106 215 aa7.41□□□□□ -1.22
PRPF39-204ENST00000553605 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
PRPF39-204ENST00000553605 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
PRPF39-204ENST00000553605 SYNE2Q8WXH0 6885 aaKnown RBP7.41□□□□□ -1.22
PRPF39-204ENST00000553605 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 SMIM27A0A1W2PRY6 76 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 C9orf92A6NGG3 77 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 CFC1P0CG37 223 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 LINC00483Q53H64 154 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 TMEM136Q6ZRR5 245 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 SND1-IT1Q9HBX3 110 aa7.4□□□□□ -1.22
PRPF39-204ENST00000553605 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
PRPF39-204ENST00000553605 ATP5LO75964 103 aa7.39□□□□□ -1.23
PRPF39-204ENST00000553605 S100A8P05109 93 aa7.39□□□□□ -1.23
PRPF39-204ENST00000553605 PAPPA-AS1Q5QFB9 102 aa7.39□□□□□ -1.23
PRPF39-204ENST00000553605 AKAP14Q86UN6 197 aa7.39□□□□□ -1.23
PRPF39-204ENST00000553605 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
PRPF39-204ENST00000553605 GAGE2AQ6NT46 116 aa7.38□□□□□ -1.23
PRPF39-204ENST00000553605 MRPL54Q6P161 138 aaKnown RBP7.38□□□□□ -1.23
PRPF39-204ENST00000553605 Q8NDZ9 215 aa7.38□□□□□ -1.23
PRPF39-204ENST00000553605 BATF3Q9NR55 127 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms