RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PRSS2P07478 247 aa13.1□□□□□ -0.31
RBFOX1-215ENST00000553186 DAND5Q8N907 189 aa13.1□□□□□ -0.31
RBFOX1-215ENST00000553186 KLK5Q9Y337 293 aaPredicted RBP13.1□□□□□ -0.31
RBFOX1-215ENST00000553186 TMEM238LA0A1B0GVL6 79 aa13.09□□□□□ -0.31
RBFOX1-215ENST00000553186 NUPR2A6NF83 97 aa13.09□□□□□ -0.31
RBFOX1-215ENST00000553186 A6NJY4 79 aa13.09□□□□□ -0.31
RBFOX1-215ENST00000553186 SFTA2Q6UW10 78 aa13.09□□□□□ -0.31
RBFOX1-215ENST00000553186 OCIAD2Q56VL3 154 aa13.08□□□□□ -0.31
RBFOX1-215ENST00000553186 MEIG1Q5JSS6 88 aa13.08□□□□□ -0.31
RBFOX1-215ENST00000553186 RNF151Q2KHN1 245 aa13.08□□□□□ -0.32
RBFOX1-215ENST00000553186 C2orf82Q6UX34 121 aa13.08□□□□□ -0.32
RBFOX1-215ENST00000553186 NAA38Q9BRA0 125 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-215ENST00000553186 A0A0U1RRA0 63 aa13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 EIF4EBP3O60516 100 aaPredicted RBP13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 RAB37Q96AX2 223 aa13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 A4D1N5 150 aa13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 H3BUT2 72 aa13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 APOMO95445 188 aa13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 RPL24P83731 157 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 C1orf43Q9BWL3 253 aa13.07□□□□□ -0.32
RBFOX1-215ENST00000553186 GAGE10A6NGK3 116 aa13.06□□□□□ -0.32
RBFOX1-215ENST00000553186 LYSTQ99698 3801 aa13.05□□□□□ -0.32
RBFOX1-215ENST00000553186 DNAH7Q8WXX0 4024 aa13.05□□□□□ -0.32
RBFOX1-215ENST00000553186 IFITM1P13164 125 aa13.05□□□□□ -0.32
RBFOX1-215ENST00000553186 NPC2P61916 151 aa13.05□□□□□ -0.32
RBFOX1-215ENST00000553186 CFC1BP0CG36 223 aa13.04□□□□□ -0.32
RBFOX1-215ENST00000553186 CFC1P0CG37 223 aa13.04□□□□□ -0.32
RBFOX1-215ENST00000553186 CXCL5P42830 114 aa13.04□□□□□ -0.32
RBFOX1-215ENST00000553186 CKS1BP61024 79 aa13.04□□□□□ -0.32
RBFOX1-215ENST00000553186 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
RBFOX1-215ENST00000553186 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
RBFOX1-215ENST00000553186 IGKV2D-24A0A075B6R9 120 aa13.03□□□□□ -0.32
RBFOX1-215ENST00000553186 LINC00308Q8TCZ7 52 aa13.03□□□□□ -0.32
RBFOX1-215ENST00000553186 Q9HAA7 133 aa13.03□□□□□ -0.32
RBFOX1-215ENST00000553186 K7EP34 96 aa13.03□□□□□ -0.32
RBFOX1-215ENST00000553186 SOSTDC1Q6X4U4 206 aa13.03□□□□□ -0.32
RBFOX1-215ENST00000553186 TENM2Q9NT68 2774 aa13.03□□□□□ -0.32
RBFOX1-215ENST00000553186 PLECQ15149 4684 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-215ENST00000553186 GTF2H5Q6ZYL4 71 aa13.02□□□□□ -0.33
RBFOX1-215ENST00000553186 C6orf223Q8N319 242 aa13.02□□□□□ -0.33
RBFOX1-215ENST00000553186 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
RBFOX1-215ENST00000553186 DNAH1Q9P2D7 4330 aa13.02□□□□□ -0.33
RBFOX1-215ENST00000553186 LINC00526Q96FQ7 95 aa13.01□□□□□ -0.33
RBFOX1-215ENST00000553186 A0A1W2PPM0 123 aa13.01□□□□□ -0.33
RBFOX1-215ENST00000553186 MIR7-3HGQ8N6C7 128 aa13□□□□□ -0.33
RBFOX1-215ENST00000553186 LINC00158P58513 81 aa13□□□□□ -0.33
RBFOX1-215ENST00000553186 UBE2DNLQ8IWF7 75 aa13□□□□□ -0.33
RBFOX1-215ENST00000553186 C15orf56Q8N910 161 aa13□□□□□ -0.33
RBFOX1-215ENST00000553186 STARD9Q9P2P6 4700 aa12.99□□□□□ -0.33
RBFOX1-215ENST00000553186 PFN2P35080 140 aa12.99□□□□□ -0.33
RBFOX1-215ENST00000553186 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 A0A0B4J2C4 111 aa12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 C10orf25Q5T742 122 aa12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 NTN5Q8WTR8 489 aaPredicted RBP12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 KRTAP1-5Q9BYS1 174 aa12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 PPDPFQ9H3Y8 114 aa12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 FABP2P12104 132 aa12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 UNQ6190/PRO20217Q6UXQ8 127 aa12.98□□□□□ -0.33
RBFOX1-215ENST00000553186 VPS25Q9BRG1 176 aa12.97□□□□□ -0.33
RBFOX1-215ENST00000553186 HIGD2BQ4VC39 106 aa12.96□□□□□ -0.33
RBFOX1-215ENST00000553186 COPS9Q8WXC6 57 aa12.96□□□□□ -0.33
RBFOX1-215ENST00000553186 PGPEP1Q9NXJ5 209 aa12.96□□□□□ -0.33
RBFOX1-215ENST00000553186 PRO1854Q9UHT4 67 aa12.96□□□□□ -0.33
RBFOX1-215ENST00000553186 SPCS1Q9Y6A9 102 aa12.96□□□□□ -0.33
RBFOX1-215ENST00000553186 K7ERU9 68 aa12.96□□□□□ -0.34
RBFOX1-215ENST00000553186 C9orf116Q5BN46 136 aaPredicted RBP12.96□□□□□ -0.34
RBFOX1-215ENST00000553186 COX17Q14061 63 aa12.95□□□□□ -0.34
RBFOX1-215ENST00000553186 ZNF561-AS1K7EIQ3 104 aa12.94□□□□□ -0.34
RBFOX1-215ENST00000553186 TSPAN13O95857 204 aa12.93□□□□□ -0.34
RBFOX1-215ENST00000553186 CASC10Q5T4H9 136 aa12.93□□□□□ -0.34
RBFOX1-215ENST00000553186 RMI2Q96E14 147 aa12.93□□□□□ -0.34
RBFOX1-215ENST00000553186 GVQW2A0A096LPI5 108 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-215ENST00000553186 C6orf48Q9UBA6 75 aa12.91□□□□□ -0.34
RBFOX1-215ENST00000553186 C2orf48Q96LS8 159 aa12.9□□□□□ -0.34
RBFOX1-215ENST00000553186 TGP01266 2768 aa12.9□□□□□ -0.35
RBFOX1-215ENST00000553186 LOC107984156A0A0G2JMH3 177 aa12.89□□□□□ -0.35
RBFOX1-215ENST00000553186 ARL17AQ8IVW1 177 aa12.89□□□□□ -0.35
RBFOX1-215ENST00000553186 CAMK2N2Q96S95 79 aa12.89□□□□□ -0.35
RBFOX1-215ENST00000553186 SND1-IT1Q9HBX3 110 aa12.88□□□□□ -0.35
RBFOX1-215ENST00000553186 MUC7Q8TAX7 377 aa12.88□□□□□ -0.35
RBFOX1-215ENST00000553186 Q6ZRU5 148 aa12.87□□□□□ -0.35
RBFOX1-215ENST00000553186 TRBV30A0A0K0K1B3 111 aa12.87□□□□□ -0.35
RBFOX1-215ENST00000553186 USP17L23D6RBM5 183 aa12.87□□□□□ -0.35
RBFOX1-215ENST00000553186 VPS13DQ5THJ4 4388 aa12.86□□□□□ -0.35
RBFOX1-215ENST00000553186 F8WDY8 70 aa12.86□□□□□ -0.35
RBFOX1-215ENST00000553186 IGKV2-28A0A075B6P5 120 aa12.85□□□□□ -0.35
RBFOX1-215ENST00000553186 NBDYA0A0U1RRE5 68 aa12.85□□□□□ -0.35
RBFOX1-215ENST00000553186 H7C2G1 150 aa12.85□□□□□ -0.35
RBFOX1-215ENST00000553186 IGKV2D-28P01615 120 aa12.85□□□□□ -0.35
RBFOX1-215ENST00000553186 RPL13AP40429 203 aaKnown RBP12.83□□□□□ -0.36
RBFOX1-215ENST00000553186 SVIPQ8NHG7 77 aa12.83□□□□□ -0.36
RBFOX1-215ENST00000553186 TTC32Q5I0X7 151 aa12.83□□□□□ -0.36
RBFOX1-215ENST00000553186 DNAH10Q8IVF4 4471 aa12.82□□□□□ -0.36
RBFOX1-215ENST00000553186 SLPIP03973 132 aa12.82□□□□□ -0.36
RBFOX1-215ENST00000553186 SYCNQ0VAF6 134 aa12.82□□□□□ -0.36
RBFOX1-215ENST00000553186 LINC00337Q8N6G1 96 aa12.81□□□□□ -0.36
RBFOX1-215ENST00000553186 LECT2O14960 151 aa12.81□□□□□ -0.36
RBFOX1-215ENST00000553186 Q1RN00 199 aa12.81□□□□□ -0.36
RBFOX1-215ENST00000553186 WWC2-AS2Q96NR7 200 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms