RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 EFNA4P52798 201 aa2.33□□□□□ -2.04
USP44-208ENST00000552440 EDDM3BP56851 147 aa2.33□□□□□ -2.04
USP44-208ENST00000552440 SMIM11AP58511 58 aa2.33□□□□□ -2.04
USP44-208ENST00000552440 CFAP126Q5VTH2 177 aa2.33□□□□□ -2.04
USP44-208ENST00000552440 FAM223AQ8IWN6 122 aa2.33□□□□□ -2.04
USP44-208ENST00000552440 TET1Q8NFU7 2136 aa2.33□□□□□ -2.04
USP44-208ENST00000552440 FBN2P35556 2912 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 CELSR3Q9NYQ7 3312 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 MICAL3Q7RTP6 2002 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 IGKV3-7A0A075B6H7 116 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 COX6CP09669 75 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 CFAP46Q8IYW2 2715 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 AKAP13Q12802 2813 aa2.32□□□□□ -2.04
USP44-208ENST00000552440 ASXL3Q9C0F0 2248 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 LINC00643Q86TS7 51 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 SPACA4Q8TDM5 124 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 FBN3Q75N90 2809 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 SPTAN1Q13813 2472 aaKnown RBP2.31□□□□□ -2.04
USP44-208ENST00000552440 TRBV25-1A0A075B6N4 114 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 CLPSL1A2RUU4 121 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 IGHV3-30P01768 117 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 IGHV3-30-5P0DP03 117 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 SFTA2Q6UW10 78 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 CDC42SE2Q9NRR3 84 aa2.31□□□□□ -2.04
USP44-208ENST00000552440 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
USP44-208ENST00000552440 TMEM14DPA8MWL7 114 aa2.3□□□□□ -2.04
USP44-208ENST00000552440 TMEM170BQ5T4T1 132 aa2.3□□□□□ -2.04
USP44-208ENST00000552440 ITPR3Q14573 2671 aa2.3□□□□□ -2.04
USP44-208ENST00000552440 ZNF56Q15929 161 aa2.29□□□□□ -2.04
USP44-208ENST00000552440 DYNLRB1Q9NP97 96 aa2.29□□□□□ -2.04
USP44-208ENST00000552440 CREBBPQ92793 2442 aa2.29□□□□□ -2.04
USP44-208ENST00000552440 ZFHX3Q15911 3703 aa2.29□□□□□ -2.04
USP44-208ENST00000552440 DLG5Q8TDM6 1919 aa2.29□□□□□ -2.04
USP44-208ENST00000552440 LAMA1P25391 3075 aa2.29□□□□□ -2.04
USP44-208ENST00000552440 TRBV6-4A0A1B0GX49 114 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 PDE6GP18545 87 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 ELOF1P60002 83 aaKnown RBP2.28□□□□□ -2.04
USP44-208ENST00000552440 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 NDUFA4L2Q9NRX3 87 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 C2CD3Q4AC94 2353 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 MYOFQ9NZM1 2061 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 NBPF19A0A087WUL8 3843 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 TRBV6-7A0A0A0MS04 114 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 PPYP01298 95 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 IGLV3-1P01715 115 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 IGLV6-57P01721 117 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 SMIM13P0DJ93 91 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 C20orf197Q8N268 126 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 RP1P56715 2156 aa2.28□□□□□ -2.04
USP44-208ENST00000552440 DNHD1Q96M86 4753 aa2.28□□□□□ -2.05
USP44-208ENST00000552440 MPDZO75970 2070 aa2.28□□□□□ -2.05
USP44-208ENST00000552440 EXPH5Q8NEV8 1989 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 SEC16AO15027 2179 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 NUMA1Q14980 2115 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 ZGRF1Q86YA3 2104 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 IGKV2-28A0A075B6P5 120 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 A0A087WWC5 75 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 C7orf77A4D0Y5 90 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 HIGD1CA8MV81 97 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 HMGN4O00479 90 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 IGKV2D-28P01615 120 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 KRTAP10-8P60410 259 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 SSBP1Q04837 148 aaKnown RBP2.27□□□□□ -2.05
USP44-208ENST00000552440 TMEM14BQ9NUH8 114 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 LENEPQ9Y5L5 61 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 MED13Q9UHV7 2174 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 MED12LQ86YW9 2145 aa2.27□□□□□ -2.05
USP44-208ENST00000552440 HEATR1Q9H583 2144 aaKnown RBP2.27□□□□□ -2.05
USP44-208ENST00000552440 LOC101927531A0A1B0GV80 90 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 JMJD7-PLA2G4BH0Y9G9 81 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 GNGT1P63211 74 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 XAF1Q6GPH4 301 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 DEFB124Q8NES8 71 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 URB1O60287 2271 aaKnown RBP2.26□□□□□ -2.05
USP44-208ENST00000552440 PTPRQQ9UMZ3 2332 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 LOC285095A0A1B0GVY8 99 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 ZNF815PA8K554 130 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 C10orf142B7Z368 130 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 F8WEM9 126 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 HMGN2P05204 90 aaKnown RBP2.26□□□□□ -2.05
USP44-208ENST00000552440 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 TVP23CQ96ET8 276 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 CYYR1Q96J86 154 aa2.26□□□□□ -2.05
USP44-208ENST00000552440 ATMQ13315 3056 aa2.25□□□□□ -2.05
USP44-208ENST00000552440 ACACAQ13085 2346 aa2.25□□□□□ -2.05
USP44-208ENST00000552440 A0A1W2PNN7 141 aa2.25□□□□□ -2.05
USP44-208ENST00000552440 UMAD1C9J7I0 102 aa2.25□□□□□ -2.05
USP44-208ENST00000552440 PPP1R17O96001 155 aa2.25□□□□□ -2.05
USP44-208ENST00000552440 RNASE3P12724 160 aaKnown RBP2.25□□□□□ -2.05
USP44-208ENST00000552440 V9GYH0 126 aa2.25□□□□□ -2.05
USP44-208ENST00000552440 APC2O95996 2303 aa2.25□□□□□ -2.05
USP44-208ENST00000552440 CEP192Q8TEP8 1941 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 COL6A6A6NMZ7 2263 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 IQCF6A8MYZ5 107 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 CCL3L1P16619 93 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 SPAG11BQ08648 103 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 PSMG4Q5JS54 123 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 C10orf55Q5SWW7 151 aa2.24□□□□□ -2.05
USP44-208ENST00000552440 SPAG11AQ6PDA7 123 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms