RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 FAM218AQ96MZ4 157 aa3.74□□□□□ -1.81
CCNT1-204ENST00000551989 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
CCNT1-204ENST00000551989 ASPMQ8IZT6 3477 aa3.74□□□□□ -1.81
CCNT1-204ENST00000551989 TRBV10-3A0A0K0K1G6 114 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 LOC100131303A0A0U1RQF7 123 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 CCDC179H3BU77 68 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 BCE1O60756 84 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 COX7CP15954 63 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 PDE6GP18545 87 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 APOC4P55056 127 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 KRTAP10-2P60368 255 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 GAGE2AQ6NT46 116 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 LINC00526Q96FQ7 95 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 SS18L2Q9UHA2 77 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 C22orf24Q9Y442 160 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 LRBAP50851 2863 aa3.73□□□□□ -1.81
CCNT1-204ENST00000551989 LECT2O14960 151 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 CCKP06307 115 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 CRYGAP11844 174 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 KRTAP1-1Q07627 177 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 C9orf153Q5TBE3 101 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 LINC00482Q8N8I6 264 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 WFDC11Q8NEX6 87 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 OR13C6PQ8NH95 151 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 SMCR5Q8TEV8 140 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 FAM30AQ9NZY2 134 aa3.72□□□□□ -1.81
CCNT1-204ENST00000551989 DCHS1Q96JQ0 3298 aa3.71□□□□□ -1.82
CCNT1-204ENST00000551989 A0A087WYN8 130 aa3.71□□□□□ -1.82
CCNT1-204ENST00000551989 GVQW2A0A096LPI5 108 aaPredicted RBP3.71□□□□□ -1.82
CCNT1-204ENST00000551989 MIFP14174 115 aa3.71□□□□□ -1.82
CCNT1-204ENST00000551989 PFN2P35080 140 aa3.71□□□□□ -1.82
CCNT1-204ENST00000551989 RPL18AQ02543 176 aaKnown RBP3.71□□□□□ -1.82
CCNT1-204ENST00000551989 Q8N814 137 aa3.71□□□□□ -1.82
CCNT1-204ENST00000551989 BBC3Q96PG8 261 aaPredicted RBP3.71□□□□□ -1.82
CCNT1-204ENST00000551989 CACNA1AO00555 2505 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 IGKV3OR2-268A0A0C4DH90 116 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 A0A0J9YWU9 116 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 hADV29S1A0JD25 119 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 PRB1P04280 392 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 IGHV4-30-4P0DP06 118 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 DEFB130BP0DP73 79 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 DEFB130AP0DP74 79 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 XCL1P47992 114 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 REG3AQ06141 175 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 KIAA0087Q14695 138 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 LELP1Q5T871 98 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 WFDC10AQ9H1F0 79 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 Q9HAA7 133 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 PKD1L2Q7Z442 2459 aa3.7□□□□□ -1.82
CCNT1-204ENST00000551989 LAMA5O15230 3695 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 SPG11Q96JI7 2443 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 LOC110117498A0A087WWA1 95 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 TRBV7-6A0A0J9YX20 115 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 NDUFC2-KCTD14E9PQ53 114 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 H3BNG1 76 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 TMEM258P61165 79 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 DAD1P61803 113 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 RPS28P62857 69 aaKnown RBP3.69□□□□□ -1.82
CCNT1-204ENST00000551989 LYPD5Q6UWN5 251 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 SMIM20Q8N5G0 67 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 CHCHD10Q8WYQ3 142 aaPredicted RBP3.69□□□□□ -1.82
CCNT1-204ENST00000551989 UBL5Q9BZL1 73 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 C14orf132Q9NPU4 83 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 CREBBPQ92793 2442 aa3.69□□□□□ -1.82
CCNT1-204ENST00000551989 TACC2O95359 2948 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 WNK1Q9H4A3 2382 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 NCOR2Q9Y618 2525 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 ANGP03950 147 aaKnown RBP3.68□□□□□ -1.82
CCNT1-204ENST00000551989 SPART-AS1P0CW21 52 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 SPAG11BQ08648 103 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 C6orf223Q8N319 242 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 LINC00846Q9NV44 126 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 SPTBN4Q9H254 2564 aa3.68□□□□□ -1.82
CCNT1-204ENST00000551989 J3KT08 172 aa3.67□□□□□ -1.82
CCNT1-204ENST00000551989 IGLV6-57P01721 117 aa3.67□□□□□ -1.82
CCNT1-204ENST00000551989 NANOS2P60321 138 aaKnown RBP3.67□□□□□ -1.82
CCNT1-204ENST00000551989 RBM3P98179 157 aaKnown RBP3.67□□□□□ -1.82
CCNT1-204ENST00000551989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
CCNT1-204ENST00000551989 LINC00575Q6W349 94 aa3.67□□□□□ -1.82
CCNT1-204ENST00000551989 LINC00269Q8N2A0 174 aa3.67□□□□□ -1.82
CCNT1-204ENST00000551989 C2orf48Q96LS8 159 aa3.67□□□□□ -1.82
CCNT1-204ENST00000551989 CSMD1Q96PZ7 3565 aa3.67□□□□□ -1.82
CCNT1-204ENST00000551989 NCR3O14931 201 aa3.66□□□□□ -1.82
CCNT1-204ENST00000551989 PLA2G2AP14555 144 aa3.66□□□□□ -1.82
CCNT1-204ENST00000551989 C6orf99Q4VX62 202 aa3.66□□□□□ -1.82
CCNT1-204ENST00000551989 Q8NAQ8 132 aa3.66□□□□□ -1.82
CCNT1-204ENST00000551989 DIRC1Q969H9 104 aa3.66□□□□□ -1.82
CCNT1-204ENST00000551989 J3QKU1 62 aa3.65□□□□□ -1.83
CCNT1-204ENST00000551989 CXCL6P80162 114 aa3.65□□□□□ -1.83
CCNT1-204ENST00000551989 Q6ZQT0 140 aa3.65□□□□□ -1.83
CCNT1-204ENST00000551989 DSCR8Q96T75 97 aa3.65□□□□□ -1.83
CCNT1-204ENST00000551989 C11orf68Q9H3H3 251 aaKnown RBP3.65□□□□□ -1.83
CCNT1-204ENST00000551989 USP9XQ93008 2570 aaPredicted RBP3.65□□□□□ -1.83
CCNT1-204ENST00000551989 ACACBO00763 2458 aa3.65□□□□□ -1.83
CCNT1-204ENST00000551989 TRAV23DV6A0A075B6W5 121 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 LOC107984640A0A0U1RRK4 108 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 A0A1B0GW54 56 aa3.64□□□□□ -1.83
CCNT1-204ENST00000551989 EGFEM1PQ0D2K5 195 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms