RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 KIAA0087Q14695 138 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 LCA10Q71F78 164 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 Q8IZM0 81 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 C11orf45Q8TAV5 145 aa3.54□□□□□ -1.84
LSM3P2-201ENST00000551246 NBEAQ8NFP9 2946 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 IGLV4-60A0A075B6I1 120 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 A0A1B0GW54 56 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 A6NDX4 124 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 COX7BP24311 80 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 UBE2AP49459 152 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 FBXL19-AS1Q494R0 122 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 Q75L30 129 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 LINC00269Q8N2A0 174 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 DIRC1Q969H9 104 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 C5orf42Q9H799 3197 aa3.53□□□□□ -1.84
LSM3P2-201ENST00000551246 USP34Q70CQ2 3546 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 C8orf87E5RJ46 101 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 UBE2L6O14933 153 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 ZNF73O43830 326 aaPredicted RBP3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 IGHV3-11P01762 117 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 LINC01006Q8NI28 216 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 Q9BRP9 147 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 LIMD2Q9BT23 127 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 SDK1Q7Z5N4 2213 aa3.52□□□□□ -1.85
LSM3P2-201ENST00000551246 COL6A3P12111 3177 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 IGKV3-7A0A075B6H7 116 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 CCL24O00175 119 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 PSPHP1O15172 72 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 IGKV3-20P01619 116 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 VPREB1P12018 145 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 APOC4P55056 127 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 SCXQ7RTU7 201 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
LSM3P2-201ENST00000551246 POLEQ07864 2286 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 LINC00959A0A1B0GUT2 108 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 PRM2P04554 102 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 C7orf65Q6ZTY9 151 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 TOMM7Q9P0U1 55 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 MKI67P46013 3256 aaKnown RBP3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 WDR87Q6ZQQ6 2873 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 PTPRQQ9UMZ3 2332 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 DOPEY2Q9Y3R5 2298 aa3.5□□□□□ -1.85
LSM3P2-201ENST00000551246 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.49□□□□□ -1.85
LSM3P2-201ENST00000551246 TRGV2A0A075B6R0 118 aa3.49□□□□□ -1.85
LSM3P2-201ENST00000551246 A0A087X002 238 aa3.49□□□□□ -1.85
LSM3P2-201ENST00000551246 ETDCA0A1B0GVM5 59 aa3.49□□□□□ -1.85
LSM3P2-201ENST00000551246 Q6ZQY7 126 aa3.49□□□□□ -1.85
LSM3P2-201ENST00000551246 MAP6D1Q9H9H5 199 aa3.49□□□□□ -1.85
LSM3P2-201ENST00000551246 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
LSM3P2-201ENST00000551246 A0A0J9YWU9 116 aa3.48□□□□□ -1.85
LSM3P2-201ENST00000551246 A0A1B0GUV1 79 aa3.48□□□□□ -1.85
LSM3P2-201ENST00000551246 HCG22E2RYF7 251 aa3.48□□□□□ -1.85
LSM3P2-201ENST00000551246 DEFB109BQ30KR1 87 aa3.48□□□□□ -1.85
LSM3P2-201ENST00000551246 Q8N9L7 120 aa3.48□□□□□ -1.85
LSM3P2-201ENST00000551246 KCNQ1DNQ9H478 68 aa3.48□□□□□ -1.85
LSM3P2-201ENST00000551246 ZFHX3Q15911 3703 aa3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 LAMA3Q16787 3333 aa3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 IGLV5-48A0A075B6I7 105 aa3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 GVQW2A0A096LPI5 108 aaPredicted RBP3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 LRCOL1A6NCL2 159 aa3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 NDUFB1O75438 58 aa3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 INSP01308 110 aa3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
LSM3P2-201ENST00000551246 ROS1P08922 2347 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 TRGV4A0A0C4DH28 118 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 DSCR10P59022 87 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 DEFB131AP59861 70 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 MOBPQ13875 183 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 B9D2Q9BPU9 175 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 PKDREJQ9NTG1 2253 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 REV3LO60673 3130 aa3.46□□□□□ -1.86
LSM3P2-201ENST00000551246 VCANP13611 3396 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 H3BPC8 53 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 CHKB-CPT1BH3BT56 60 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 ZZEF1O43149 2961 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 CNBPP62633 177 aaKnown RBP3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 C9orf163Q8N9P6 203 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 LINC01558Q9Y6Z2 57 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 MED13LQ71F56 2210 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 CACNA1BQ00975 2339 aa3.45□□□□□ -1.86
LSM3P2-201ENST00000551246 TECTAO75443 2155 aa3.44□□□□□ -1.86
LSM3P2-201ENST00000551246 TRGV1A0A0A0MS02 117 aa3.44□□□□□ -1.86
LSM3P2-201ENST00000551246 DSCR9P59020 149 aa3.44□□□□□ -1.86
LSM3P2-201ENST00000551246 CSNK1G2-AS1Q8NCQ2 148 aa3.44□□□□□ -1.86
LSM3P2-201ENST00000551246 SPRR4Q96PI1 79 aa3.44□□□□□ -1.86
LSM3P2-201ENST00000551246 KLK12Q9UKR0 248 aa3.44□□□□□ -1.86
LSM3P2-201ENST00000551246 FRYQ5TBA9 3013 aa3.44□□□□□ -1.86
LSM3P2-201ENST00000551246 SPTBN5Q9NRC6 3674 aaKnown RBP3.43□□□□□ -1.86
LSM3P2-201ENST00000551246 A0A1W2PNM2 257 aa3.43□□□□□ -1.86
LSM3P2-201ENST00000551246 KRTAP29-1A8MX34 341 aaPredicted RBP3.43□□□□□ -1.86
LSM3P2-201ENST00000551246 C3orf84H3BNL1 204 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms