RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 NUP188Q5SRE5 1749 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 IFT172Q9UG01 1749 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 PARP4Q9UKK3 1724 aaKnown RBP1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 CRYBG1Q9Y4K1 1723 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 CEP170BQ9Y4F5 1589 aaPredicted RBP1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 LOC110117498A0A087WWA1 95 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 SNRPGP15A8MWD9 76 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 JMJD7-PLA2G4BH0Y9G9 81 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 INE1O15225 51 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 IFI27P40305 119 aaPredicted RBP1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 CCL18P55774 89 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 SPAG11BQ08648 103 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 SPAG11AQ6PDA7 123 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 COX7B2Q8TF08 81 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 R4GMQ9 66 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 PAPPAQ13219 1627 aa1.1□□□□□ -2.23
TSPAN8-205ENST00000550818 ANKRD50Q9ULJ7 1429 aa1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 TECTAO75443 2155 aa1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 TRBV7-4A0A0J9YYF1 115 aa1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 F8VRH5 84 aa1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 PPP1R17O96001 155 aa1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 TFF1P04155 84 aa1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 PRB4P10163 310 aaPredicted RBP1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 SPRR4Q96PI1 79 aa1.09□□□□□ -2.23
TSPAN8-205ENST00000550818 MRC1P22897 1456 aa1.09□□□□□ -2.24
TSPAN8-205ENST00000550818 ATP7BP35670 1465 aa1.09□□□□□ -2.24
TSPAN8-205ENST00000550818 WIZO95785 1651 aa1.09□□□□□ -2.24
TSPAN8-205ENST00000550818 BCORQ6W2J9 1755 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 BIVM-ERCC5R4GMW8 1640 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 CROCC2H7BZ55 1655 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 SCN7AQ01118 1682 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 CACNA1BQ00975 2339 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 NBDYA0A0U1RRE5 68 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 D6R8Y8 96 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 UQCR11O14957 56 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 LEPROTL1O95214 131 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 DNAL4O96015 105 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 PPYP01298 95 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 ZNF137PP52743 207 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 MUSTN1Q8IVN3 82 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 WFDC6Q9BQY6 131 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 ARL2-SNX15V9GYD0 113 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 PKD1L3Q7Z443 1732 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 LRRC7Q96NW7 1537 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 ZFHX3Q15911 3703 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 DIP2AQ14689 1571 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 ERCC6L2Q5T890 1561 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 TENM1Q9UKZ4 2725 aa1.08□□□□□ -2.24
TSPAN8-205ENST00000550818 NHSL1Q5SYE7 1610 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 POLR1AO95602 1720 aaPredicted RBP1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 A0A087WTM6 91 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 M0R135 149 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 MGPP08493 103 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 SPATA8Q6RVD6 105 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 SFTA2Q6UW10 78 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 LINC00322Q6ZN03 302 aaPredicted RBP1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 BAGE2Q86Y30 109 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 PROK2Q9HC23 129 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 V9GYV3 84 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 PHRF1Q9P1Y6 1649 aaKnown RBP1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 EIF2AK4Q9P2K8 1649 aaKnown RBP1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 C3P01024 1663 aa1.07□□□□□ -2.24
TSPAN8-205ENST00000550818 RICTORQ6R327 1708 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 TIAM2Q8IVF5 1701 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 FXYD6-FXYD2A0A087WZ82 144 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 LCE6AA0A183 80 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 FXYD3Q14802 87 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 ATXN8Q156A1 80 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 GDF5OSQ5U4N7 250 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 BAGE3Q86Y29 109 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 C5orf56Q8N8D9 126 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 TMEM14CQ9P0S9 112 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 KIAA0556O60303 1618 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 ADCY10Q96PN6 1610 aa1.06□□□□□ -2.24
TSPAN8-205ENST00000550818 ABCC6O95255 1503 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 ABCA5Q8WWZ7 1642 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 TRBV30A0A0K0K1B3 111 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 NDUFB1O75438 58 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 COX17Q14061 63 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 C10orf99Q6UWK7 81 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 SMIM4Q8WVI0 70 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 PRR15LQ9BU68 103 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 HILPDAQ9Y5L2 63 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 TJP1Q07157 1748 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 ANKRD36CQ5JPF3 1778 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 ABCA1O95477 2261 aa1.05□□□□□ -2.24
TSPAN8-205ENST00000550818 LRP6O75581 1613 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 F5P12259 2224 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 TNCP24821 2201 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 ASCC3Q8N3C0 2202 aaKnown RBP1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 C5P01031 1676 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 LRRC37A2A6NM11 1700 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 LY75O60449 1722 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 A0A1B0GUT8 65 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 RPL37AP61513 92 aaKnown RBP1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 TMEM263Q8WUH6 116 aaKnown RBP1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 Q96NJ1 140 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 WFDC10AQ9H1F0 79 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 LINC00472Q9H8W2 130 aa1.04□□□□□ -2.24
TSPAN8-205ENST00000550818 ANKRD17O75179 2603 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms