RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 FDCSPQ8NFU4 85 aa2.16□□□□□ -2.06
GNPTAB-208ENST00000550718 MINOS1-NBL1R4GNA1 71 aa2.16□□□□□ -2.06
GNPTAB-208ENST00000550718 LRP5O75197 1615 aa2.16□□□□□ -2.06
GNPTAB-208ENST00000550718 MYOFQ9NZM1 2061 aa2.16□□□□□ -2.06
GNPTAB-208ENST00000550718 KIAA1549Q9HCM3 1950 aa2.16□□□□□ -2.06
GNPTAB-208ENST00000550718 PI4KAP42356 2102 aa2.15□□□□□ -2.06
GNPTAB-208ENST00000550718 CUL9Q8IWT3 2517 aa2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 NCOA6Q14686 2063 aaPredicted RBP2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 LCE6AA0A183 80 aa2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 A0A1W2PNM2 257 aa2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 NUPR2A6NF83 97 aa2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 CPSF4LA6NMK7 179 aaKnown RBP2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 M0R135 149 aa2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 ZNF137PP52743 207 aa2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 RPS27LQ71UM5 84 aaKnown RBP2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 WFDC10AQ9H1F0 79 aa2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 COL14A1Q05707 1796 aaKnown RBP2.15□□□□□ -2.07
GNPTAB-208ENST00000550718 DEPDC5O75140 1603 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 NRXN3Q9Y4C0 1643 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 CLPSL1A2RUU4 121 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 H0Y9P7 68 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 KRTAP25-1Q3LHN0 102 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 KRTAP26-1Q6PEX3 210 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 ADAMTS7Q9UKP4 1686 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 PCDH15Q96QU1 1955 aa2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 DDX60LQ5H9U9 1706 aaKnown RBP2.14□□□□□ -2.07
GNPTAB-208ENST00000550718 LRP6O75581 1613 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 LCTP09848 1927 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 KIAA1549LQ6ZVL6 1849 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 ZNF236Q9UL36 1845 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 P0C880 135 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 DEFB114Q30KQ6 69 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 ZGRF1Q86YA3 2104 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 GAFA1Q96PS6 74 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 PLAC8Q9NZF1 115 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 PLXNA2O75051 1894 aa2.13□□□□□ -2.07
GNPTAB-208ENST00000550718 ARFGEF1Q9Y6D6 1849 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 PLXNA3P51805 1871 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 DNAJC13O75165 2243 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 A0A1B0GU33 70 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 CTSGP08311 255 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 IL9P15248 144 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 CCL3L1P16619 93 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 HAMPP81172 84 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 ZCCHC13Q8WW36 166 aaKnown RBP2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 ARHGAP5-AS1Q96IT6 56 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 PLXNB3Q9ULL4 1909 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 NHSL1Q5SYE7 1610 aa2.12□□□□□ -2.07
GNPTAB-208ENST00000550718 LOC110117498A0A087WWA1 95 aa2.11□□□□□ -2.07
GNPTAB-208ENST00000550718 TRGV4A0A0C4DH28 118 aa2.11□□□□□ -2.07
GNPTAB-208ENST00000550718 IAPPP10997 89 aa2.11□□□□□ -2.07
GNPTAB-208ENST00000550718 CCL18P55774 89 aa2.11□□□□□ -2.07
GNPTAB-208ENST00000550718 FXYD4P59646 89 aa2.11□□□□□ -2.07
GNPTAB-208ENST00000550718 LINC00322Q6ZN03 302 aaPredicted RBP2.11□□□□□ -2.07
GNPTAB-208ENST00000550718 TTTY12Q9BZ98 90 aa2.11□□□□□ -2.07
GNPTAB-208ENST00000550718 UBR3Q6ZT12 1888 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 SCN7AQ01118 1682 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 ETDCA0A1B0GVM5 59 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 RNASE3P12724 160 aaKnown RBP2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 COX17Q14061 63 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 DEFB112Q30KQ8 113 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 KLK9Q9UKQ9 250 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 DDX60Q8IY21 1712 aaKnown RBP2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 GOLGA4Q13439 2230 aaKnown RBP2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 COL11A1P12107 1806 aaPredicted RBP2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 SIP14410 1827 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 ARHGAP32A7KAX9 2087 aa2.1□□□□□ -2.07
GNPTAB-208ENST00000550718 TET1Q8NFU7 2136 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 SHANK1Q9Y566 2161 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 PAPPA2Q9BXP8 1791 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 IGKV3-7A0A075B6H7 116 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 LOC730098B7Z3J9 87 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 NDUFA4O00483 81 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 TFF3Q07654 80 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 ZNF625Q96I27 306 aaPredicted RBP2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 SPRR4Q96PI1 79 aa2.09□□□□□ -2.07
GNPTAB-208ENST00000550718 LTBP2Q14767 1821 aa2.09□□□□□ -2.08
GNPTAB-208ENST00000550718 PTPRSQ13332 1948 aa2.09□□□□□ -2.08
GNPTAB-208ENST00000550718 RICTORQ6R327 1708 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 CACNA1DQ01668 2161 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 MYO16Q9Y6X6 1858 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 SPINK7P58062 85 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 HCP5Q6MZN7 132 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 C9orf163Q8N9P6 203 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 SMIM2Q9BVW6 85 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 LY75O60449 1722 aa2.08□□□□□ -2.08
GNPTAB-208ENST00000550718 LINC01590Q5TEZ4 76 aa2.07□□□□□ -2.08
GNPTAB-208ENST00000550718 CNFNQ9BYD5 112 aa2.07□□□□□ -2.08
GNPTAB-208ENST00000550718 PSORS1C2Q9UIG4 136 aa2.07□□□□□ -2.08
GNPTAB-208ENST00000550718 TOGARAM1Q9Y4F4 1720 aa2.07□□□□□ -2.08
GNPTAB-208ENST00000550718 SHROOM3Q8TF72 1996 aa2.07□□□□□ -2.08
GNPTAB-208ENST00000550718 ESPL1Q14674 2120 aa2.06□□□□□ -2.08
GNPTAB-208ENST00000550718 FREM1Q5H8C1 2179 aa2.06□□□□□ -2.08
GNPTAB-208ENST00000550718 TNCP24821 2201 aa2.06□□□□□ -2.08
GNPTAB-208ENST00000550718 DLEC1Q9Y238 1755 aa2.06□□□□□ -2.08
GNPTAB-208ENST00000550718 LAMA4Q16363 1823 aa2.06□□□□□ -2.08
GNPTAB-208ENST00000550718 TRGV2A0A075B6R0 118 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms