RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	PRB3	Q04118	309 aa	Predicted RBP	0.82	□□□□□ -2.28
CNOT2-222	ENST00000550155	TP53AIP1	Q9HCN2	124 aa		0.82	□□□□□ -2.28
CNOT2-222	ENST00000550155	UBE2D4	Q9Y2X8	147 aa		0.82	□□□□□ -2.28
CNOT2-222	ENST00000550155	ABCC1	P33527	1531 aa		0.82	□□□□□ -2.28
CNOT2-222	ENST00000550155	PPL	O60437	1756 aa		0.82	□□□□□ -2.28
CNOT2-222	ENST00000550155	KIF14	Q15058	1648 aa		0.82	□□□□□ -2.28
CNOT2-222	ENST00000550155	DNAJC13	O75165	2243 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	CACNA1C	Q13936	2221 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	KDM3B	Q7LBC6	1761 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	RGPD4	Q7Z3J3	1758 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	ANKRD17	O75179	2603 aa	Known RBP	0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	BTAF1	O14981	1849 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	WNK3	Q9BYP7	1800 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	IQCF6	A8MYZ5	107 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	WFDC2	Q14508	124 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	MYO7B	Q6PIF6	2116 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	DEFB107A	Q8IZN7	70 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	USMG5	Q96IX5	58 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	FAM103A1	Q9BTL3	118 aa	Known RBP	0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	PLAC8	Q9NZF1	115 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155		A0A0G2JMZ2	1700 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	MON2	Q7Z3U7	1717 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	ANKAR	Q7Z5J8	1434 aa		0.81	□□□□□ -2.28
CNOT2-222	ENST00000550155	LRP6	O75581	1613 aa		0.8	□□□□□ -2.28
CNOT2-222	ENST00000550155	IGLC3	P0DOY3	106 aa		0.8	□□□□□ -2.28
CNOT2-222	ENST00000550155	ATP5EP2	Q5VTU8	51 aa		0.8	□□□□□ -2.28
CNOT2-222	ENST00000550155	NEXMIF	Q5QGS0	1516 aa		0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	KDM5D	Q9BY66	1539 aa		0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	DCAF1	Q9Y4B6	1507 aa		0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	ZNF462	Q96JM2	2506 aa		0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	NUP188	Q5SRE5	1749 aa		0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	CFD	P00746	253 aa	Predicted RBP	0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	RPL38	P63173	70 aa	Known RBP	0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	ZNF236	Q9UL36	1845 aa		0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.79	□□□□□ -2.28
CNOT2-222	ENST00000550155	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155	IGLC2	P0DOY2	106 aa		0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155	COX8A	P10176	69 aa		0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155	BVES-AS1	Q5T3Y7	98 aa		0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155		Q8IZM0	81 aa		0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155	PRO0255	Q9UI72	69 aa		0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155	NKTR	P30414	1462 aa	Known RBP	0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155	ATP7B	P35670	1465 aa		0.78	□□□□□ -2.28
CNOT2-222	ENST00000550155	SCN7A	Q01118	1682 aa		0.78	□□□□□ -2.29
CNOT2-222	ENST00000550155	CFAP43	Q8NDM7	1665 aa		0.78	□□□□□ -2.29
CNOT2-222	ENST00000550155	XRN1	Q8IZH2	1706 aa	Known RBP	0.78	□□□□□ -2.29
CNOT2-222	ENST00000550155	SPTBN2	O15020	2390 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155		H3BUT2	72 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	PDCD5	O14737	125 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	DEFB121	Q5J5C9	76 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	DEFB123	Q8N688	67 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	SMCO4	Q9NRQ5	59 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	NCOA2	Q15596	1464 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	URB2	Q14146	1524 aa	Known RBP	0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	SAMD9	Q5K651	1589 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	SHPRH	Q149N8	1683 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	MYH4	Q9Y623	1939 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	CACNA1H	O95180	2353 aa		0.77	□□□□□ -2.29
CNOT2-222	ENST00000550155	POLR1A	O95602	1720 aa	Predicted RBP	0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	MYO5C	Q9NQX4	1742 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	MAP3K1	Q13233	1512 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	TULP4	Q9NRJ4	1543 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	UMAD1	C9J7I0	102 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	DEFB112	Q30KQ8	113 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	C18orf32	Q8TCD1	76 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	CRIPT	Q9P021	101 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	ZFHX3	Q15911	3703 aa		0.76	□□□□□ -2.29
CNOT2-222	ENST00000550155	LINC00959	A0A1B0GUT2	108 aa		0.75	□□□□□ -2.29
CNOT2-222	ENST00000550155	SMIM13	P0DJ93	91 aa		0.75	□□□□□ -2.29
CNOT2-222	ENST00000550155	KNDC1	Q76NI1	1749 aa		0.75	□□□□□ -2.29
CNOT2-222	ENST00000550155	ITSN2	Q9NZM3	1697 aa		0.75	□□□□□ -2.29
CNOT2-222	ENST00000550155	PTPN23	Q9H3S7	1636 aa		0.75	□□□□□ -2.29
CNOT2-222	ENST00000550155	CFAP74	Q9C0B2	1584 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	FBN2	P35556	2912 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	PLXNB2	O15031	1838 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155		A0A087WXM4	84 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	SPTY2D1-AS1	A0A0U1RR47	76 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155		I3L2K1	104 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	COX6B1	P14854	86 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	LRRC37A	A6NMS7	1700 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	RGPD1	P0DJD0	1748 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	ITSN1	Q15811	1721 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	GCC2	Q8IWJ2	1684 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	PREX1	Q8TCU6	1659 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	KIF21B	O75037	1637 aa		0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	TARBP1	Q13395	1621 aa	Known RBP	0.74	□□□□□ -2.29
CNOT2-222	ENST00000550155	KIF20B	Q96Q89	1820 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	BDP1	A6H8Y1	2624 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	CRYBG1	Q9Y4K1	1723 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	C5	P01031	1676 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	C2CD3	Q4AC94	2353 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155		I3L3M4	83 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	IFI27	P40305	119 aa	Predicted RBP	0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	SPINK6	Q6UWN8	80 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	GAFA1	Q96PS6	74 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	ABCA12	Q86UK0	2595 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	TTC28	Q96AY4	2481 aa		0.73	□□□□□ -2.29
CNOT2-222	ENST00000550155	F8	P00451	2351 aa		0.72	□□□□□ -2.29
CNOT2-222	ENST00000550155	LRRIQ1	Q96JM4	1722 aa		0.72	□□□□□ -2.29

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