RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 LINC01546A6NGU7 62 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 OXTP01178 125 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 LINC00614P0C842 121 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 RAB5BP61020 215 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 KIAA0087Q14695 138 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 C10orf25Q5T742 122 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 TOMM7Q9P0U1 55 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 C6orf48Q9UBA6 75 aa4.03□□□□□ -1.76
TMEM106C-213ENST00000550146 TRBV30A0A0K0K1B3 111 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 TINCRA0A1B0GVN0 87 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 TLX1NBP0CAT3 122 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 HNRNPA3P51991 378 aaKnown RBP4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 PMVKQ15126 192 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 C9orf116Q5BN46 136 aaPredicted RBP4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 C2orf82Q6UX34 121 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 Q8IZM0 81 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 LINC00469Q8N7U9 141 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 C18orf32Q8TCD1 76 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 CST9LQ9H4G1 147 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
TMEM106C-213ENST00000550146 A0A1W2PNN7 141 aa4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 NDUFC2-KCTD14E9PQ53 114 aa4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 HBDP02042 147 aa4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 NDUFA6P56556 154 aa4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 PRR3P79522 188 aaKnown RBP4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 GAGE2EQ4V326 116 aa4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 Q6ZRP5 223 aa4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 GAGE2DQ9UEU5 116 aa4.01□□□□□ -1.77
TMEM106C-213ENST00000550146 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
TMEM106C-213ENST00000550146 F8VRH5 84 aa4□□□□□ -1.77
TMEM106C-213ENST00000550146 H3BRM9 83 aa4□□□□□ -1.77
TMEM106C-213ENST00000550146 ATP5LO75964 103 aa4□□□□□ -1.77
TMEM106C-213ENST00000550146 PDZD11Q5EBL8 140 aa4□□□□□ -1.77
TMEM106C-213ENST00000550146 COX7B2Q8TF08 81 aa4□□□□□ -1.77
TMEM106C-213ENST00000550146 FAT3Q8TDW7 4589 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 FAM168BA1KXE4 195 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 SMIM1B2RUZ4 78 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 SPINK8P0C7L1 97 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 CXCL5P42830 114 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 PMCHL1Q16048 86 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 SPINK6Q6UWN8 80 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 PHF5AQ7RTV0 110 aaKnown RBP3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 FAM19A5Q7Z5A7 132 aaPredicted RBP3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 CBLN2Q8IUK8 224 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 SLC7A5P1Q8MH63 180 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 CHCHD1Q96BP2 118 aaKnown RBP3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 URB1-AS1Q96HZ7 61 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
TMEM106C-213ENST00000550146 HERC1Q15751 4861 aa3.98□□□□□ -1.77
TMEM106C-213ENST00000550146 A0A096LNJ9 63 aa3.98□□□□□ -1.77
TMEM106C-213ENST00000550146 REG3GQ6UW15 175 aa3.98□□□□□ -1.77
TMEM106C-213ENST00000550146 BAGE3Q86Y29 109 aa3.98□□□□□ -1.77
TMEM106C-213ENST00000550146 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
TMEM106C-213ENST00000550146 PSORS1C2Q9UIG4 136 aa3.98□□□□□ -1.77
TMEM106C-213ENST00000550146 M0QXV9 152 aa3.97□□□□□ -1.77
TMEM106C-213ENST00000550146 HSBP1O75506 76 aa3.97□□□□□ -1.77
TMEM106C-213ENST00000550146 IGLC3P0DOY3 106 aa3.97□□□□□ -1.77
TMEM106C-213ENST00000550146 UBE2BP63146 152 aa3.97□□□□□ -1.77
TMEM106C-213ENST00000550146 C1orf137Q5JT78 98 aa3.97□□□□□ -1.77
TMEM106C-213ENST00000550146 C9orf129Q5T035 196 aaKnown RBP3.97□□□□□ -1.77
TMEM106C-213ENST00000550146 XAGE1AQ9HD64 81 aa3.97□□□□□ -1.77
TMEM106C-213ENST00000550146 TRGC2P03986 189 aa3.96□□□□□ -1.78
TMEM106C-213ENST00000550146 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
TMEM106C-213ENST00000550146 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
TMEM106C-213ENST00000550146 TMEM170BQ5T4T1 132 aa3.96□□□□□ -1.78
TMEM106C-213ENST00000550146 SERTAD4-AS1Q5TG53 156 aa3.96□□□□□ -1.78
TMEM106C-213ENST00000550146 CHTOPQ9Y3Y2 248 aaKnown RBP3.96□□□□□ -1.78
TMEM106C-213ENST00000550146 IGLV5-39A0A0G2JS06 123 aa3.95□□□□□ -1.78
TMEM106C-213ENST00000550146 IGLV7-43P04211 117 aa3.95□□□□□ -1.78
TMEM106C-213ENST00000550146 ZNF22P17026 224 aaPredicted RBP3.95□□□□□ -1.78
TMEM106C-213ENST00000550146 SFTA2Q6UW10 78 aa3.95□□□□□ -1.78
TMEM106C-213ENST00000550146 IFI27L1Q96BM0 104 aa3.95□□□□□ -1.78
TMEM106C-213ENST00000550146 LINC01600Q96MT4 127 aa3.95□□□□□ -1.78
TMEM106C-213ENST00000550146 TRAV12-1A0A0B4J245 112 aa3.94□□□□□ -1.78
TMEM106C-213ENST00000550146 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
TMEM106C-213ENST00000550146 PFN2P35080 140 aa3.94□□□□□ -1.78
TMEM106C-213ENST00000550146 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
TMEM106C-213ENST00000550146 FAM19A2Q8N3H0 131 aa3.94□□□□□ -1.78
TMEM106C-213ENST00000550146 DIRC1Q969H9 104 aa3.94□□□□□ -1.78
TMEM106C-213ENST00000550146 C22orf24Q9Y442 160 aa3.94□□□□□ -1.78
TMEM106C-213ENST00000550146 COLCA2A8K830 154 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 H0Y8G0 127 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 LEPROTL1O95214 131 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 MRPL55Q7Z7F7 128 aaKnown RBP3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 NKAPP1Q8N9T2 125 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 TP73-AS1Q9UF72 201 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 ERG28Q9UKR5 140 aa3.93□□□□□ -1.78
TMEM106C-213ENST00000550146 TNXBP22105 4242 aa3.92□□□□□ -1.78
TMEM106C-213ENST00000550146 TMEM223A0PJW6 202 aa3.92□□□□□ -1.78
TMEM106C-213ENST00000550146 NUPR1O60356 82 aa3.92□□□□□ -1.78
TMEM106C-213ENST00000550146 SERF1AO75920 110 aa3.92□□□□□ -1.78
TMEM106C-213ENST00000550146 COX17Q14061 63 aa3.92□□□□□ -1.78
TMEM106C-213ENST00000550146 ODF1Q14990 250 aa3.92□□□□□ -1.78
TMEM106C-213ENST00000550146 ZNF625Q96I27 306 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms