RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CNFNQ9BYD5 112 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 PSENENQ9NZ42 101 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 PLAC8Q9NZF1 115 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 KDM5DQ9BY66 1539 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 TARBP1Q13395 1621 aaKnown RBP0.67□□□□□ -2.3
CCDC38-208ENST00000549876 PTPN23Q9H3S7 1636 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 ALKQ9UM73 1620 aa0.67□□□□□ -2.3
CCDC38-208ENST00000549876 ABCC1P33527 1531 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 MAP3K1Q13233 1512 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 NEXMIFQ5QGS0 1516 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.66□□□□□ -2.3
CCDC38-208ENST00000549876 MYMXA0A1B0GTQ4 84 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 COX6A2Q02221 97 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 PLGLAQ15195 96 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 SSBP3-AS1Q7Z2R9 100 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 FDCSPQ8NFU4 85 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 UBE2D4Q9Y2X8 147 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 PKD1L3Q7Z443 1732 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 ZFHX3Q15911 3703 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 KIF20BQ96Q89 1820 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 ANKRD36A6QL64 1941 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 CFAP74Q9C0B2 1584 aa0.66□□□□□ -2.3
CCDC38-208ENST00000549876 PAPPA2Q9BXP8 1791 aa0.65□□□□□ -2.3
CCDC38-208ENST00000549876 ASXL3Q9C0F0 2248 aa0.65□□□□□ -2.3
CCDC38-208ENST00000549876 GNGT1P63211 74 aa0.65□□□□□ -2.31
CCDC38-208ENST00000549876 WFDC2Q14508 124 aa0.65□□□□□ -2.31
CCDC38-208ENST00000549876 DEFB107AQ8IZN7 70 aa0.65□□□□□ -2.31
CCDC38-208ENST00000549876 FAM103A1Q9BTL3 118 aaKnown RBP0.65□□□□□ -2.31
CCDC38-208ENST00000549876 DIP2BQ9P265 1576 aa0.65□□□□□ -2.31
CCDC38-208ENST00000549876 RGPD8O14715 1765 aaPredicted RBP0.65□□□□□ -2.31
CCDC38-208ENST00000549876 RGPD5Q99666 1765 aa0.65□□□□□ -2.31
CCDC38-208ENST00000549876 ANKARQ7Z5J8 1434 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 TMEM131LA2VDJ0 1609 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 JMJD1CQ15652 2540 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 TRBV7-4A0A0J9YYF1 115 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 CEBPZOSA8MTT3 80 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 IQCF6A8MYZ5 107 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 SPINK7P58062 85 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 PIGYQ3MUY2 71 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 C6orf201Q7Z4U5 140 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 CCDC141Q6ZP82 1450 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 SAMD9Q5K651 1589 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 SETBP1Q9Y6X0 1596 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 NOTCH1P46531 2555 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 LRRC37AA6NMS7 1700 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 TULP4Q9NRJ4 1543 aa0.64□□□□□ -2.31
CCDC38-208ENST00000549876 FBN2P35556 2912 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 ATP7BP35670 1465 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 NCOA2Q15596 1464 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 A0A1B0GU69 56 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 A0A1B0GUT8 65 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 IGLC3P0DOY3 106 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 TP53AIP1Q9HCN2 124 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 LAMC1P11047 1609 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 FAM208BQ5VWN6 2430 aa0.63□□□□□ -2.31
CCDC38-208ENST00000549876 NKTRP30414 1462 aaKnown RBP0.62□□□□□ -2.31
CCDC38-208ENST00000549876 BVES-AS1Q5T3Y7 98 aa0.62□□□□□ -2.31
CCDC38-208ENST00000549876 KIAA0556O60303 1618 aa0.62□□□□□ -2.31
CCDC38-208ENST00000549876 PAPPAQ13219 1627 aa0.62□□□□□ -2.31
CCDC38-208ENST00000549876 NHSL1Q5SYE7 1610 aa0.62□□□□□ -2.31
CCDC38-208ENST00000549876 ZNF462Q96JM2 2506 aa0.61□□□□□ -2.31
CCDC38-208ENST00000549876 URB2Q14146 1524 aaKnown RBP0.61□□□□□ -2.31
CCDC38-208ENST00000549876 H3BUT2 72 aa0.61□□□□□ -2.31
CCDC38-208ENST00000549876 IGLC2P0DOY2 106 aa0.61□□□□□ -2.31
CCDC38-208ENST00000549876 DEFB121Q5J5C9 76 aa0.61□□□□□ -2.31
CCDC38-208ENST00000549876 GOLGA4Q13439 2230 aaKnown RBP0.61□□□□□ -2.31
CCDC38-208ENST00000549876 RGPD2P0DJD1 1756 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 LINC00959A0A1B0GUT2 108 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 I3L2K1 104 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 NDUFB1O75438 58 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 ATP5EP2Q5VTU8 51 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 DEFB123Q8N688 67 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 C18orf32Q8TCD1 76 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 USMG5Q96IX5 58 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 PRO0255Q9UI72 69 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 ABCA8O94911 1581 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 LRRIQ1Q96JM4 1722 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 UBR3Q6ZT12 1888 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 CCDC88BA6NC98 1476 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 LTN1O94822 1766 aa0.6□□□□□ -2.31
CCDC38-208ENST00000549876 QSER1Q2KHR3 1735 aa0.59□□□□□ -2.31
CCDC38-208ENST00000549876 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
CCDC38-208ENST00000549876 Q8IZM0 81 aa0.59□□□□□ -2.31
CCDC38-208ENST00000549876 SMCO4Q9NRQ5 59 aa0.59□□□□□ -2.31
CCDC38-208ENST00000549876 COL14A1Q05707 1796 aaKnown RBP0.59□□□□□ -2.32
CCDC38-208ENST00000549876 BIVM-ERCC5R4GMW8 1640 aa0.59□□□□□ -2.32
CCDC38-208ENST00000549876 PPRC1Q5VV67 1664 aaKnown RBP0.59□□□□□ -2.32
CCDC38-208ENST00000549876 SCN11AQ9UI33 1791 aa0.58□□□□□ -2.32
CCDC38-208ENST00000549876 PIK3C2BO00750 1634 aa0.58□□□□□ -2.32
CCDC38-208ENST00000549876 PDCD5O14737 125 aa0.58□□□□□ -2.32
CCDC38-208ENST00000549876 HMGA1P17096 107 aaKnown RBP0.58□□□□□ -2.32
CCDC38-208ENST00000549876 DEFB112Q30KQ8 113 aa0.58□□□□□ -2.32
CCDC38-208ENST00000549876 URB1O60287 2271 aaKnown RBP0.58□□□□□ -2.32
CCDC38-208ENST00000549876 MAGI3Q5TCQ9 1506 aa0.58□□□□□ -2.32
CCDC38-208ENST00000549876 UMAD1C9J7I0 102 aa0.57□□□□□ -2.32
CCDC38-208ENST00000549876 SMIM13P0DJ93 91 aa0.57□□□□□ -2.32
CCDC38-208ENST00000549876 RGPD1P0DJD0 1748 aa0.57□□□□□ -2.32
CCDC38-208ENST00000549876 TIAM2Q8IVF5 1701 aa0.57□□□□□ -2.32
CCDC38-208ENST00000549876 LRRC7Q96NW7 1537 aa0.57□□□□□ -2.32
CCDC38-208ENST00000549876 PLCE1Q9P212 2302 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms