RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 CKS1BP61024 79 aa6.48□□□□□ -1.37
CCDC38-207ENST00000549752 UNQ6190/PRO20217Q6UXQ8 127 aa6.48□□□□□ -1.37
CCDC38-207ENST00000549752 FAM19A3Q7Z5A8 133 aa6.48□□□□□ -1.37
CCDC38-207ENST00000549752 TOMM6Q96B49 74 aa6.48□□□□□ -1.37
CCDC38-207ENST00000549752 LINC01600Q96MT4 127 aa6.48□□□□□ -1.37
CCDC38-207ENST00000549752 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
CCDC38-207ENST00000549752 IFITM2Q01629 132 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 KIAA0087Q14695 138 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 RHEBQ15382 184 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 KIAA1644Q3SXP7 199 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 C6orf226Q5I0X4 101 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 ERASQ7Z444 233 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 COMMD7Q86VX2 200 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 C6orf48Q9UBA6 75 aa6.47□□□□□ -1.37
CCDC38-207ENST00000549752 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 MT1HL1P0DM35 61 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 GAGE2EQ4V326 116 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 C10orf25Q5T742 122 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 Q8IZM0 81 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 SCGB3A1Q96QR1 104 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 ALKBH7Q9BT30 221 aaPredicted RBP6.46□□□□□ -1.38
CCDC38-207ENST00000549752 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 TOMM7Q9P0U1 55 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 GAGE2DQ9UEU5 116 aa6.46□□□□□ -1.38
CCDC38-207ENST00000549752 CXCL5P42830 114 aa6.45□□□□□ -1.38
CCDC38-207ENST00000549752 SRSF9Q13242 221 aaKnown RBP eCLIP6.45□□□□□ -1.38
CCDC38-207ENST00000549752 C1orf137Q5JT78 98 aa6.45□□□□□ -1.38
CCDC38-207ENST00000549752 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
CCDC38-207ENST00000549752 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
CCDC38-207ENST00000549752 FABP9Q0Z7S8 132 aa6.44□□□□□ -1.38
CCDC38-207ENST00000549752 C10orf91Q5T1B1 145 aa6.44□□□□□ -1.38
CCDC38-207ENST00000549752 C2orf82Q6UX34 121 aa6.44□□□□□ -1.38
CCDC38-207ENST00000549752 FA2HQ7L5A8 372 aa6.44□□□□□ -1.38
CCDC38-207ENST00000549752 PHF5AQ7RTV0 110 aaKnown RBP6.44□□□□□ -1.38
CCDC38-207ENST00000549752 RPS10P5Q9NQ39 176 aa6.44□□□□□ -1.38
CCDC38-207ENST00000549752 CARHSP1Q9Y2V2 147 aaKnown RBP6.44□□□□□ -1.38
CCDC38-207ENST00000549752 NDUFA5Q16718 116 aa6.43□□□□□ -1.38
CCDC38-207ENST00000549752 ZC2HC1BQ5TFG8 222 aa6.43□□□□□ -1.38
CCDC38-207ENST00000549752 FAM19A5Q7Z5A7 132 aaPredicted RBP6.43□□□□□ -1.38
CCDC38-207ENST00000549752 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
CCDC38-207ENST00000549752 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
CCDC38-207ENST00000549752 TINCRA0A1B0GVN0 87 aa6.42□□□□□ -1.38
CCDC38-207ENST00000549752 F8VRH5 84 aa6.42□□□□□ -1.38
CCDC38-207ENST00000549752 M0QXV9 152 aa6.42□□□□□ -1.38
CCDC38-207ENST00000549752 UBE2BP63146 152 aa6.42□□□□□ -1.38
CCDC38-207ENST00000549752 LINC00469Q8N7U9 141 aa6.42□□□□□ -1.38
CCDC38-207ENST00000549752 PMVKQ15126 192 aa6.41□□□□□ -1.38
CCDC38-207ENST00000549752 PDZD11Q5EBL8 140 aa6.41□□□□□ -1.38
CCDC38-207ENST00000549752 FAM168BA1KXE4 195 aa6.4□□□□□ -1.38
CCDC38-207ENST00000549752 H3BRM9 83 aa6.4□□□□□ -1.38
CCDC38-207ENST00000549752 SNAPINO95295 136 aa6.4□□□□□ -1.38
CCDC38-207ENST00000549752 IGLV7-43P04211 117 aa6.4□□□□□ -1.38
CCDC38-207ENST00000549752 LBHQ53QV2 105 aaPredicted RBP6.4□□□□□ -1.38
CCDC38-207ENST00000549752 CST9LQ9H4G1 147 aa6.4□□□□□ -1.38
CCDC38-207ENST00000549752 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 RAB5BP61020 215 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 C9orf129Q5T035 196 aaKnown RBP6.39□□□□□ -1.39
CCDC38-207ENST00000549752 SVBPQ8N300 66 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 COX7B2Q8TF08 81 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 TRAPPC1Q9Y5R8 145 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 HMCN2Q8NDA2 5059 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 TNXBP22105 4242 aa6.39□□□□□ -1.39
CCDC38-207ENST00000549752 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
CCDC38-207ENST00000549752 APOC3P02656 99 aa6.38□□□□□ -1.39
CCDC38-207ENST00000549752 LINC00614P0C842 121 aa6.38□□□□□ -1.39
CCDC38-207ENST00000549752 H0Y9J4 135 aa6.37□□□□□ -1.39
CCDC38-207ENST00000549752 NUPR1O60356 82 aa6.37□□□□□ -1.39
CCDC38-207ENST00000549752 HBDP02042 147 aa6.37□□□□□ -1.39
CCDC38-207ENST00000549752 TP73-AS1Q9UF72 201 aa6.37□□□□□ -1.39
CCDC38-207ENST00000549752 ATP5LO75964 103 aa6.36□□□□□ -1.39
CCDC38-207ENST00000549752 NDUFA6P56556 154 aa6.36□□□□□ -1.39
CCDC38-207ENST00000549752 C18orf32Q8TCD1 76 aa6.36□□□□□ -1.39
CCDC38-207ENST00000549752 XAGE1AQ9HD64 81 aa6.36□□□□□ -1.39
CCDC38-207ENST00000549752 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
CCDC38-207ENST00000549752 SPINK8P0C7L1 97 aa6.35□□□□□ -1.39
CCDC38-207ENST00000549752 SFTA2Q6UW10 78 aa6.35□□□□□ -1.39
CCDC38-207ENST00000549752 MRPL55Q7Z7F7 128 aaKnown RBP6.35□□□□□ -1.39
CCDC38-207ENST00000549752 C22orf24Q9Y442 160 aa6.35□□□□□ -1.39
CCDC38-207ENST00000549752 IGLV1-50A0A075B6I6 118 aa6.34□□□□□ -1.39
CCDC38-207ENST00000549752 IGLC3P0DOY3 106 aa6.34□□□□□ -1.39
CCDC38-207ENST00000549752 KRTAP7-1Q8IUC3 87 aa6.34□□□□□ -1.39
CCDC38-207ENST00000549752 RPL13AP40429 203 aaKnown RBP6.33□□□□□ -1.4
CCDC38-207ENST00000549752 NKAPP1Q8N9T2 125 aa6.33□□□□□ -1.4
CCDC38-207ENST00000549752 ZNF861PO60384 105 aa6.32□□□□□ -1.4
CCDC38-207ENST00000549752 RPL28P46779 137 aaKnown RBP6.32□□□□□ -1.4
CCDC38-207ENST00000549752 COX17Q14061 63 aa6.32□□□□□ -1.4
CCDC38-207ENST00000549752 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
CCDC38-207ENST00000549752 A0A096LNJ9 63 aa6.31□□□□□ -1.4
CCDC38-207ENST00000549752 IGLV5-39A0A0G2JS06 123 aa6.31□□□□□ -1.4
CCDC38-207ENST00000549752 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
CCDC38-207ENST00000549752 BAGE3Q86Y29 109 aa6.31□□□□□ -1.4
CCDC38-207ENST00000549752 CHCHD1Q96BP2 118 aaKnown RBP6.31□□□□□ -1.4
CCDC38-207ENST00000549752 PMCHL1Q16048 86 aa6.3□□□□□ -1.4
CCDC38-207ENST00000549752 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
CCDC38-207ENST00000549752 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
CCDC38-207ENST00000549752 URB1-AS1Q96HZ7 61 aa6.3□□□□□ -1.4
CCDC38-207ENST00000549752 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms