RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 CFAP161Q6P656 301 aa6.61□□□□□ -1.35
TROAP-210ENST00000549534 LINC00269Q8N2A0 174 aa6.61□□□□□ -1.35
TROAP-210ENST00000549534 C1orf43Q9BWL3 253 aa6.61□□□□□ -1.35
TROAP-210ENST00000549534 TRAV13-1A0A0B4J241 112 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 Q6ZUT4 128 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 FAM19A3Q7Z5A8 133 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 LINC01561Q8N1V8 128 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 PRR34Q9NV39 138 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
TROAP-210ENST00000549534 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
TROAP-210ENST00000549534 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 IGHV3-30P01768 117 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 IGHV3-33P01772 117 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 IGLC3P0DOY3 106 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 IGHV3-30-3P0DP02 117 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 IGHV3-30-5P0DP03 117 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 MALP21145 153 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 UBE2D1P51668 147 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 CD164L2Q6UWJ8 174 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 UBE2WQ96B02 151 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
TROAP-210ENST00000549534 MRPL35Q9NZE8 188 aaKnown RBP6.59□□□□□ -1.35
TROAP-210ENST00000549534 IGLV4-60A0A075B6I1 120 aa6.58□□□□□ -1.36
TROAP-210ENST00000549534 IGKV3OR2-268A0A0C4DH90 116 aa6.58□□□□□ -1.36
TROAP-210ENST00000549534 C14orf177Q52M58 125 aa6.58□□□□□ -1.36
TROAP-210ENST00000549534 LINC00469Q8N7U9 141 aa6.58□□□□□ -1.36
TROAP-210ENST00000549534 LOC105371267A0A1B0GV96 52 aa6.57□□□□□ -1.36
TROAP-210ENST00000549534 C11orf86A6NJI1 115 aa6.57□□□□□ -1.36
TROAP-210ENST00000549534 LINC00587B1AMM8 73 aa6.57□□□□□ -1.36
TROAP-210ENST00000549534 COX7A2LO14548 114 aa6.57□□□□□ -1.36
TROAP-210ENST00000549534 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
TROAP-210ENST00000549534 PSORS1C2Q9UIG4 136 aa6.57□□□□□ -1.36
TROAP-210ENST00000549534 F8WDY8 70 aa6.56□□□□□ -1.36
TROAP-210ENST00000549534 PRSS2P07478 247 aa6.56□□□□□ -1.36
TROAP-210ENST00000549534 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
TROAP-210ENST00000549534 CIRBPQ14011 172 aaKnown RBP6.56□□□□□ -1.36
TROAP-210ENST00000549534 LINC00173Q6ZV60 143 aa6.56□□□□□ -1.36
TROAP-210ENST00000549534 OPRPNQ99935 248 aaPredicted RBP6.56□□□□□ -1.36
TROAP-210ENST00000549534 IGKV2D-24A0A075B6R9 120 aa6.55□□□□□ -1.36
TROAP-210ENST00000549534 IGLV5-45A0A087WSX0 123 aa6.55□□□□□ -1.36
TROAP-210ENST00000549534 XCL1P47992 114 aa6.55□□□□□ -1.36
TROAP-210ENST00000549534 NMUP48645 174 aa6.55□□□□□ -1.36
TROAP-210ENST00000549534 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
TROAP-210ENST00000549534 ZC2HC1BQ5TFG8 222 aa6.55□□□□□ -1.36
TROAP-210ENST00000549534 CHCHD10Q8WYQ3 142 aaPredicted RBP6.55□□□□□ -1.36
TROAP-210ENST00000549534 PMCHL2Q9BQD1 86 aa6.55□□□□□ -1.36
TROAP-210ENST00000549534 A0A087WZ39 114 aa6.54□□□□□ -1.36
TROAP-210ENST00000549534 CXCL5P42830 114 aa6.54□□□□□ -1.36
TROAP-210ENST00000549534 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
TROAP-210ENST00000549534 PKIGQ9Y2B9 76 aa6.54□□□□□ -1.36
TROAP-210ENST00000549534 IGLV4-69A0A075B6H9 119 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 IGHV3OR16-9A0A0B4J2B5 98 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 LGALS3P17931 250 aaKnown RBP6.53□□□□□ -1.36
TROAP-210ENST00000549534 PYY3Q5JQD4 70 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 ENHOQ6UWT2 76 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 C9orf163Q8N9P6 203 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 COPS9Q8WXC6 57 aa6.53□□□□□ -1.36
TROAP-210ENST00000549534 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 E9PLD3 99 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 ZNF561-AS1K7EIQ3 104 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 LEPROTO15243 131 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 CFC1BP0CG36 223 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 CKS1BP61024 79 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
TROAP-210ENST00000549534 C6orf226Q5I0X4 101 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 CLPSL2Q6UWE3 100 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.37
TROAP-210ENST00000549534 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
TROAP-210ENST00000549534 IGLV10-54A0A075B6I4 117 aa6.51□□□□□ -1.37
TROAP-210ENST00000549534 TMEM223A0PJW6 202 aa6.51□□□□□ -1.37
TROAP-210ENST00000549534 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
TROAP-210ENST00000549534 HERV-K104P63124 156 aa6.51□□□□□ -1.37
TROAP-210ENST00000549534 SPATA45Q537H7 98 aa6.51□□□□□ -1.37
TROAP-210ENST00000549534 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
TROAP-210ENST00000549534 FAM104AQ969W3 186 aa6.51□□□□□ -1.37
TROAP-210ENST00000549534 C12orf57Q99622 126 aa6.51□□□□□ -1.37
TROAP-210ENST00000549534 J3QQQ9 107 aa6.5□□□□□ -1.37
TROAP-210ENST00000549534 BOD1L2Q8IYS8 172 aa6.5□□□□□ -1.37
TROAP-210ENST00000549534 Q8IZM0 81 aa6.5□□□□□ -1.37
TROAP-210ENST00000549534 PAM16Q9Y3D7 125 aa6.5□□□□□ -1.37
TROAP-210ENST00000549534 USH2AO75445 5202 aa6.5□□□□□ -1.37
TROAP-210ENST00000549534 IGHV3-64A0A075B6Q5 118 aa6.49□□□□□ -1.37
TROAP-210ENST00000549534 A0A087WYN8 130 aa6.49□□□□□ -1.37
TROAP-210ENST00000549534 CNBPP62633 177 aaKnown RBP6.49□□□□□ -1.37
TROAP-210ENST00000549534 SLC25A34Q6PIV7 304 aa6.49□□□□□ -1.37
TROAP-210ENST00000549534 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
TROAP-210ENST00000549534 ATOH7Q8N100 152 aa6.49□□□□□ -1.37
TROAP-210ENST00000549534 COX7B2Q8TF08 81 aa6.49□□□□□ -1.37
TROAP-210ENST00000549534 DPH3Q96FX2 82 aa6.49□□□□□ -1.37
TROAP-210ENST00000549534 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.48□□□□□ -1.37
TROAP-210ENST00000549534 IGLV5-39A0A0G2JS06 123 aa6.48□□□□□ -1.37
TROAP-210ENST00000549534 DLEU1O43261 78 aa6.48□□□□□ -1.37
TROAP-210ENST00000549534 COX6A2Q02221 97 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms