RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
PTCH1-217ENST00000548420 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
PTCH1-217ENST00000548420 SEC11AP67812 179 aa8.64□□□□□ -1.03
PTCH1-217ENST00000548420 C10orf25Q5T742 122 aa8.64□□□□□ -1.03
PTCH1-217ENST00000548420 A0A096LNJ9 63 aa8.63□□□□□ -1.03
PTCH1-217ENST00000548420 NDUFA1O15239 70 aa8.63□□□□□ -1.03
PTCH1-217ENST00000548420 LINC00614P0C842 121 aa8.63□□□□□ -1.03
PTCH1-217ENST00000548420 TLX1NBP0CAT3 122 aa8.63□□□□□ -1.03
PTCH1-217ENST00000548420 HERVK_113P63121 156 aa8.63□□□□□ -1.03
PTCH1-217ENST00000548420 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
PTCH1-217ENST00000548420 SLC7A5P1Q8MH63 180 aa8.63□□□□□ -1.03
PTCH1-217ENST00000548420 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
PTCH1-217ENST00000548420 SMCO4Q9NRQ5 59 aa8.62□□□□□ -1.03
PTCH1-217ENST00000548420 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
PTCH1-217ENST00000548420 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
PTCH1-217ENST00000548420 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
PTCH1-217ENST00000548420 GAGE2BQ13066 116 aa8.61□□□□□ -1.03
PTCH1-217ENST00000548420 C6orf48Q9UBA6 75 aa8.61□□□□□ -1.03
PTCH1-217ENST00000548420 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
PTCH1-217ENST00000548420 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.6□□□□□ -1.03
PTCH1-217ENST00000548420 C7orf33Q8WU49 177 aa8.6□□□□□ -1.03
PTCH1-217ENST00000548420 TRBV30A0A0K0K1B3 111 aa8.59□□□□□ -1.03
PTCH1-217ENST00000548420 RAB5BP61020 215 aa8.59□□□□□ -1.03
PTCH1-217ENST00000548420 PMVKQ15126 192 aa8.59□□□□□ -1.03
PTCH1-217ENST00000548420 PDZD11Q5EBL8 140 aa8.59□□□□□ -1.03
PTCH1-217ENST00000548420 C2orf82Q6UX34 121 aa8.59□□□□□ -1.03
PTCH1-217ENST00000548420 CBLN2Q8IUK8 224 aa8.59□□□□□ -1.03
PTCH1-217ENST00000548420 Q8IZM0 81 aa8.59□□□□□ -1.03
PTCH1-217ENST00000548420 GEMIN7Q9H840 131 aaKnown RBP8.59□□□□□ -1.03
PTCH1-217ENST00000548420 Q6ZRP5 223 aa8.58□□□□□ -1.04
PTCH1-217ENST00000548420 HBDP02042 147 aa8.57□□□□□ -1.04
PTCH1-217ENST00000548420 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
PTCH1-217ENST00000548420 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
PTCH1-217ENST00000548420 SMIM1B2RUZ4 78 aa8.56□□□□□ -1.04
PTCH1-217ENST00000548420 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
PTCH1-217ENST00000548420 LINC00469Q8N7U9 141 aa8.56□□□□□ -1.04
PTCH1-217ENST00000548420 NDUFC2-KCTD14E9PQ53 114 aa8.55□□□□□ -1.04
PTCH1-217ENST00000548420 PRSS2P07478 247 aa8.55□□□□□ -1.04
PTCH1-217ENST00000548420 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
PTCH1-217ENST00000548420 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
PTCH1-217ENST00000548420 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
PTCH1-217ENST00000548420 REG3GQ6UW15 175 aa8.55□□□□□ -1.04
PTCH1-217ENST00000548420 CHCHD1Q96BP2 118 aaKnown RBP8.55□□□□□ -1.04
PTCH1-217ENST00000548420 PACRGQ96M98 296 aaPredicted RBP8.55□□□□□ -1.04
PTCH1-217ENST00000548420 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
PTCH1-217ENST00000548420 ATP5LO75964 103 aa8.54□□□□□ -1.04
PTCH1-217ENST00000548420 CKS1BP61024 79 aa8.54□□□□□ -1.04
PTCH1-217ENST00000548420 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
PTCH1-217ENST00000548420 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
PTCH1-217ENST00000548420 COLCA2A8K830 154 aa8.52□□□□□ -1.05
PTCH1-217ENST00000548420 F8VRH5 84 aa8.52□□□□□ -1.05
PTCH1-217ENST00000548420 TRGC2P03986 189 aa8.52□□□□□ -1.05
PTCH1-217ENST00000548420 CXCL5P42830 114 aa8.52□□□□□ -1.05
PTCH1-217ENST00000548420 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
PTCH1-217ENST00000548420 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
PTCH1-217ENST00000548420 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
PTCH1-217ENST00000548420 FAM168BA1KXE4 195 aa8.51□□□□□ -1.05
PTCH1-217ENST00000548420 PRR4Q16378 134 aa8.51□□□□□ -1.05
PTCH1-217ENST00000548420 GAGE2EQ4V326 116 aa8.51□□□□□ -1.05
PTCH1-217ENST00000548420 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
PTCH1-217ENST00000548420 COX7B2Q8TF08 81 aa8.51□□□□□ -1.05
PTCH1-217ENST00000548420 GAGE2DQ9UEU5 116 aa8.51□□□□□ -1.05
PTCH1-217ENST00000548420 SPINK8P0C7L1 97 aa8.5□□□□□ -1.05
PTCH1-217ENST00000548420 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
PTCH1-217ENST00000548420 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
PTCH1-217ENST00000548420 A6NJY4 79 aa8.49□□□□□ -1.05
PTCH1-217ENST00000548420 H3BRM9 83 aa8.49□□□□□ -1.05
PTCH1-217ENST00000548420 NDUFA6P56556 154 aa8.49□□□□□ -1.05
PTCH1-217ENST00000548420 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
PTCH1-217ENST00000548420 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
PTCH1-217ENST00000548420 LINC00310P59036 64 aa8.48□□□□□ -1.05
PTCH1-217ENST00000548420 IFI27L1Q96BM0 104 aa8.48□□□□□ -1.05
PTCH1-217ENST00000548420 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
PTCH1-217ENST00000548420 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
PTCH1-217ENST00000548420 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
PTCH1-217ENST00000548420 FAM19A5Q7Z5A7 132 aaPredicted RBP8.46□□□□□ -1.06
PTCH1-217ENST00000548420 FAM19A2Q8N3H0 131 aa8.46□□□□□ -1.06
PTCH1-217ENST00000548420 HSBP1O75506 76 aa8.45□□□□□ -1.06
PTCH1-217ENST00000548420 CHTOPQ9Y3Y2 248 aaKnown RBP8.45□□□□□ -1.06
PTCH1-217ENST00000548420 NUPR1O60356 82 aa8.44□□□□□ -1.06
PTCH1-217ENST00000548420 XAGE1AQ9HD64 81 aa8.44□□□□□ -1.06
PTCH1-217ENST00000548420 M0QXV9 152 aa8.43□□□□□ -1.06
PTCH1-217ENST00000548420 SERF1AO75920 110 aa8.43□□□□□ -1.06
PTCH1-217ENST00000548420 TMEM170BQ5T4T1 132 aa8.42□□□□□ -1.06
PTCH1-217ENST00000548420 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
PTCH1-217ENST00000548420 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
PTCH1-217ENST00000548420 SCO1O75880 301 aa8.41□□□□□ -1.06
PTCH1-217ENST00000548420 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
PTCH1-217ENST00000548420 TP73-AS1Q9UF72 201 aa8.41□□□□□ -1.06
PTCH1-217ENST00000548420 LEPROTL1O95214 131 aa8.4□□□□□ -1.06
PTCH1-217ENST00000548420 IGLV7-43P04211 117 aa8.4□□□□□ -1.06
PTCH1-217ENST00000548420 SFTA2Q6UW10 78 aa8.4□□□□□ -1.06
PTCH1-217ENST00000548420 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
PTCH1-217ENST00000548420 COX17Q14061 63 aa8.39□□□□□ -1.07
PTCH1-217ENST00000548420 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
PTCH1-217ENST00000548420 IGLV5-37A0A075B6J1 123 aa8.38□□□□□ -1.07
PTCH1-217ENST00000548420 LBHQ53QV2 105 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-217ENST00000548420 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
PTCH1-217ENST00000548420 UBE2BP63146 152 aa8.37□□□□□ -1.07
PTCH1-217ENST00000548420 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms