RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 KLK12Q9UKR0 248 aa4.18□□□□□ -1.74
PTPRR-207ENST00000548220 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
PTPRR-207ENST00000548220 IGHV3OR16-9A0A0B4J2B5 98 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 H3BRM9 83 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 TAL2Q16559 108 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 SFTA2Q6UW10 78 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 Q6ZUT4 128 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 GEMIN7Q9H840 131 aaKnown RBP4.17□□□□□ -1.74
PTPRR-207ENST00000548220 RYR3Q15413 4870 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 DNAH1Q9P2D7 4330 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 SACSQ9NZJ4 4579 aa4.17□□□□□ -1.74
PTPRR-207ENST00000548220 A0A087WZ39 114 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 E9PLD3 99 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 LY6G6CO95867 125 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 IGHV3-30P01768 117 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 IGHV3-33P01772 117 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 IGHV3-30-3P0DP02 117 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 IGHV3-30-5P0DP03 117 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 KRTAP26-1Q6PEX3 210 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 Q6ZVH6 145 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 UBE2WQ96B02 151 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 LYSTQ99698 3801 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 CHAC1Q9BUX1 264 aa4.16□□□□□ -1.74
PTPRR-207ENST00000548220 C11orf86A6NJI1 115 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 COX7A2LO14548 114 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 APOMO95445 188 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 HERVK_113P61574 105 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 VAMP3Q15836 100 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 C14orf177Q52M58 125 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 C1orf134Q5TEV5 83 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 MAPKAPK5-AS1Q8N8E1 139 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 DEFB104AQ8WTQ1 72 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 CHCHD10Q8WYQ3 142 aaPredicted RBP4.15□□□□□ -1.74
PTPRR-207ENST00000548220 OPRPNQ99935 248 aaPredicted RBP4.15□□□□□ -1.74
PTPRR-207ENST00000548220 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.74
PTPRR-207ENST00000548220 IGLV4-69A0A075B6H9 119 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 TRAV13-1A0A0B4J241 112 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 MYMXA0A1B0GTQ4 84 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 Q6ZRN7 208 aaPredicted RBP4.14□□□□□ -1.75
PTPRR-207ENST00000548220 CEND1Q8N111 149 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 C6orf223Q8N319 242 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 RYR2Q92736 4967 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 DNAH6Q9C0G6 4158 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 HYDINQ4G0P3 5121 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 IGHV1-58A0A0C4DH39 117 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 IGLV5-39A0A0G2JS06 123 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 A0A0J9YXV3 536 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 SMIM13P0DJ93 91 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 FOXI1Q12951 378 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 LINC00336Q6ZUF6 198 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 KRTAP1-5Q9BYS1 174 aa4.14□□□□□ -1.75
PTPRR-207ENST00000548220 ALMS1Q8TCU4 4167 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 IGHV3-64A0A075B6Q5 118 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
PTPRR-207ENST00000548220 ZNF815PA8K554 130 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 CXCL5P42830 114 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 XCL1P47992 114 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 FXYD2P54710 66 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 C2orf48Q96LS8 159 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 HIST1H4GQ99525 98 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 CDKN2A-AS1Q9UH64 79 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 PKIGQ9Y2B9 76 aa4.13□□□□□ -1.75
PTPRR-207ENST00000548220 KMT2AQ03164 3969 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 TMEM223A0PJW6 202 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 H3BUT2 72 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 LEPROTO15243 131 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 PSCAO43653 123 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 ZNF22P17026 224 aaPredicted RBP4.12□□□□□ -1.75
PTPRR-207ENST00000548220 COX6A2Q02221 97 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 RNASE13Q5GAN3 156 aaKnown RBP4.12□□□□□ -1.75
PTPRR-207ENST00000548220 TMEM170BQ5T4T1 132 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 GTF2H5Q6ZYL4 71 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 Q8IZM0 81 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 RAB37Q96AX2 223 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 PLEKHB2Q96CS7 222 aa4.12□□□□□ -1.75
PTPRR-207ENST00000548220 IGLV10-54A0A075B6I4 117 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 A0A1B0GWB2 263 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 LRCOL1A6NCL2 159 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 GAGE10A6NGK3 116 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 SMIM1B2RUZ4 78 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 J3QQQ9 107 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 K7EP34 96 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 LGALS3P17931 250 aaKnown RBP4.11□□□□□ -1.75
PTPRR-207ENST00000548220 CNBPP62633 177 aaKnown RBP4.11□□□□□ -1.75
PTPRR-207ENST00000548220 COX17Q14061 63 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 SCGB1D4Q6XE38 83 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
PTPRR-207ENST00000548220 Q9HAA7 133 aa4.11□□□□□ -1.75
PTPRR-207ENST00000548220 SPANXB1Q9NS25 103 aaPredicted RBP4.11□□□□□ -1.75
PTPRR-207ENST00000548220 NHP2Q9NX24 153 aaKnown RBP4.11□□□□□ -1.75
PTPRR-207ENST00000548220 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.1□□□□□ -1.75
PTPRR-207ENST00000548220 IGKV3OR2-268A0A0C4DH90 116 aa4.1□□□□□ -1.75
PTPRR-207ENST00000548220 A0A1W2PPM0 123 aa4.1□□□□□ -1.75
PTPRR-207ENST00000548220 PRSS2P07478 247 aa4.1□□□□□ -1.75
PTPRR-207ENST00000548220 HERV-K104P63124 156 aa4.1□□□□□ -1.75
PTPRR-207ENST00000548220 C6orf226Q5I0X4 101 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms