RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ALG5Q9Y673 324 aa0.98□□□□□ -2.25
DEPDC4-204ENST00000547823 TRBV30A0A0K0K1B3 111 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 ZNF727A8MUV8 499 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 BPY2O14599 106 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 NOL3O60936 208 aaKnown RBP0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 UPK1BO75841 260 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 CST7O76096 145 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 NCR2O95944 276 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 APCSP02743 223 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 MGPP08493 103 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 OR5AL1P0C617 328 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 AKAIN1P0CW23 69 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 IL18Q14116 193 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 C6orf99Q4VX62 202 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 KHDC3LQ587J8 217 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 SPANXN1Q5VSR9 72 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 SSBP3-AS1Q7Z2R9 100 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 FAM19A1Q7Z5A9 133 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 LINC00469Q8N7U9 141 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 AP1S3Q96PC3 154 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 CCDC32Q9BV29 185 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 NPCDR1Q9BY65 106 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 GEMIN7Q9H840 131 aaKnown RBP0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 XAGE1AQ9HD64 81 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 NIT2Q9NQR4 276 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 GSKIPQ9P0R6 139 aa0.97□□□□□ -2.25
DEPDC4-204ENST00000547823 TRBV20-1A0A075B6N2 111 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 TRAV13-1A0A0B4J241 112 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM236DA0A1B0GTK5 79 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 L7N2F9 121 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 HPGDSO60760 199 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 SFT2D2O95562 160 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM236CP0DP71 79 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 S100A11P31949 105 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 BCAP31P51572 246 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 FOXA3P55318 350 aaPredicted RBP0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 TAS2R45P59539 299 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 DEFA3P59666 94 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 NCS1P62166 190 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 TMEM128Q5BJH2 165 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM231DQ6ZW35 169 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 MRPL52Q86TS9 123 aaKnown RBP0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 MIR7-3HGQ8N6C7 128 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 C5orf17Q8NAS9 161 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 HIGD2AQ9BW72 106 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 SCP2D1Q9UJQ7 156 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 EPDR1Q9UM22 224 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 CHTOPQ9Y3Y2 248 aaKnown RBP0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 ZNF706Q9Y5V0 76 aaPredicted RBP0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 ARL2-SNX15V9GYD0 113 aa0.96□□□□□ -2.26
DEPDC4-204ENST00000547823 FXYD6-FXYD2A0A087WZ82 144 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM25AB3EWG3 89 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM25CB3EWG5 89 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM25GB3EWG6 89 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 TMEM238C9JI98 176 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 MT1BP07438 61 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 CXCL1P09341 107 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 SULT1A1P50225 295 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 HBG1P69891 147 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 HBG2P69892 147 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 SSBP1Q04837 148 aaKnown RBP0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 ATP6V1FQ16864 119 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 RNASE13Q5GAN3 156 aaKnown RBP0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 C2orf82Q6UX34 121 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 ATP11AUNQ6ZP68 121 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 FAM19A3Q7Z5A8 133 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 LIMD2Q9BT23 127 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 MRPS26Q9BYN8 205 aaKnown RBP0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 TMEM126AQ9H061 195 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 KCNIP2Q9NS61 270 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 MCUBQ9NWR8 336 aa0.95□□□□□ -2.26
DEPDC4-204ENST00000547823 IGHV3OR16-9A0A0B4J2B5 98 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 ANKRD20A5PA0PJZ0 165 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 IGSF23A1L1A6 192 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 C9orf170A2RU37 121 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 RAB19A4D1S5 217 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 SDHAF1A6NFY7 115 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 A8MWP4 228 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 C17orf112F2Z3M2 114 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 M0R378 163 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 SCO1O75880 301 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 ATP5HO75947 161 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 ARL14EPLP0DKL9 152 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 TAGLN2P37802 199 aaKnown RBP0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 SEC61GP60059 68 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 MRPS10P82664 201 aaKnown RBP0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 GATD1Q8NB37 220 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 ST20-AS1Q8NBB2 130 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 RPL39LQ96EH5 51 aaKnown RBP0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 MRAP2Q96G30 205 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 TIMM17AQ99595 171 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 WDR61Q9GZS3 305 aaKnown RBP0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 TMEM242Q9NWH2 141 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 ZFP30Q9Y2G7 519 aa0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 LSM5Q9Y4Y9 91 aaKnown RBP0.94□□□□□ -2.26
DEPDC4-204ENST00000547823 I3L3M4 83 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 HMGB3O15347 200 aaKnown RBP0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 P0C880 135 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 PMCHP20382 165 aa0.93□□□□□ -2.26
DEPDC4-204ENST00000547823 ORMDL2Q53FV1 153 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms