RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 LINC00337Q8N6G1 96 aa13.21□□□□□ -0.29
MSLN-202ENST00000545450 IGKV2-28A0A075B6P5 120 aa13.21□□□□□ -0.3
MSLN-202ENST00000545450 IGKV2D-28P01615 120 aa13.21□□□□□ -0.3
MSLN-202ENST00000545450 CRPP02741 224 aa13.21□□□□□ -0.3
MSLN-202ENST00000545450 UQCRQO14949 82 aa13.2□□□□□ -0.3
MSLN-202ENST00000545450 GAGE2AQ6NT46 116 aa13.2□□□□□ -0.3
MSLN-202ENST00000545450 TMEM243Q9BU79 118 aa13.2□□□□□ -0.3
MSLN-202ENST00000545450 MIR7-3HGQ8N6C7 128 aa13.19□□□□□ -0.3
MSLN-202ENST00000545450 OVOL2Q9BRP0 275 aa13.19□□□□□ -0.3
MSLN-202ENST00000545450 C9orf153Q5TBE3 101 aa13.18□□□□□ -0.3
MSLN-202ENST00000545450 COX7B2Q8TF08 81 aa13.18□□□□□ -0.3
MSLN-202ENST00000545450 LINC00526Q96FQ7 95 aa13.18□□□□□ -0.3
MSLN-202ENST00000545450 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
MSLN-202ENST00000545450 UBE2L6O14933 153 aa13.17□□□□□ -0.3
MSLN-202ENST00000545450 CSNK1G2-AS1Q8NCQ2 148 aa13.17□□□□□ -0.3
MSLN-202ENST00000545450 HIST1H4AP62805 103 aaKnown RBP13.16□□□□□ -0.3
MSLN-202ENST00000545450 SMIM11BQ8TCY0 68 aa13.16□□□□□ -0.3
MSLN-202ENST00000545450 A0A087WYN8 130 aa13.15□□□□□ -0.3
MSLN-202ENST00000545450 WFDC9Q8NEX5 89 aa13.15□□□□□ -0.3
MSLN-202ENST00000545450 STAB1Q9NY15 2570 aa13.14□□□□□ -0.31
MSLN-202ENST00000545450 H0YGX0 51 aa13.14□□□□□ -0.31
MSLN-202ENST00000545450 OBSCN-AS1Q96MR7 158 aa13.14□□□□□ -0.31
MSLN-202ENST00000545450 DNAL4O96015 105 aa13.13□□□□□ -0.31
MSLN-202ENST00000545450 COX7CP15954 63 aa13.13□□□□□ -0.31
MSLN-202ENST00000545450 CCL18P55774 89 aa13.13□□□□□ -0.31
MSLN-202ENST00000545450 C9orf129Q5T035 196 aaKnown RBP13.13□□□□□ -0.31
MSLN-202ENST00000545450 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
MSLN-202ENST00000545450 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
MSLN-202ENST00000545450 TOMM7Q9P0U1 55 aa13.12□□□□□ -0.31
MSLN-202ENST00000545450 CMYA5Q8N3K9 4069 aa13.12□□□□□ -0.31
MSLN-202ENST00000545450 LINC00158P58513 81 aa13.11□□□□□ -0.31
MSLN-202ENST00000545450 PLAC8L1A1L4L8 177 aa13.11□□□□□ -0.31
MSLN-202ENST00000545450 MAST4O15021 2626 aa13.11□□□□□ -0.31
MSLN-202ENST00000545450 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
MSLN-202ENST00000545450 IBA57-AS1B1ANH7 110 aa13.1□□□□□ -0.31
MSLN-202ENST00000545450 C14orf132Q9NPU4 83 aa13.1□□□□□ -0.31
MSLN-202ENST00000545450 LOC100131303A0A0U1RQF7 123 aa13.09□□□□□ -0.31
MSLN-202ENST00000545450 C16orf74Q96GX8 76 aa13.09□□□□□ -0.31
MSLN-202ENST00000545450 KLK5Q9Y337 293 aaPredicted RBP13.09□□□□□ -0.31
MSLN-202ENST00000545450 TRBV6-4A0A1B0GX49 114 aa13.08□□□□□ -0.31
MSLN-202ENST00000545450 ATOX1O00244 68 aa13.08□□□□□ -0.31
MSLN-202ENST00000545450 WIPF1O43516 503 aa13.08□□□□□ -0.31
MSLN-202ENST00000545450 CRYGAP11844 174 aa13.08□□□□□ -0.32
MSLN-202ENST00000545450 IGLV4-60A0A075B6I1 120 aa13.07□□□□□ -0.32
MSLN-202ENST00000545450 NBEAL2Q6ZNJ1 2754 aa13.07□□□□□ -0.32
MSLN-202ENST00000545450 TRGV2A0A075B6R0 118 aa13.06□□□□□ -0.32
MSLN-202ENST00000545450 A0A087WZ39 114 aa13.06□□□□□ -0.32
MSLN-202ENST00000545450 Q6JHZ5 121 aa13.06□□□□□ -0.32
MSLN-202ENST00000545450 IGKV3OR2-268A0A0C4DH90 116 aa13.05□□□□□ -0.32
MSLN-202ENST00000545450 LINC00846Q9NV44 126 aa13.05□□□□□ -0.32
MSLN-202ENST00000545450 PKD1L1Q8TDX9 2849 aa13.05□□□□□ -0.32
MSLN-202ENST00000545450 LECT2O14960 151 aa13.05□□□□□ -0.32
MSLN-202ENST00000545450 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
MSLN-202ENST00000545450 TRBV6-8A0A0A6YYG3 113 aa13.04□□□□□ -0.32
MSLN-202ENST00000545450 PFN2P35080 140 aa13.03□□□□□ -0.32
MSLN-202ENST00000545450 PAX4O43316 350 aa13.03□□□□□ -0.32
MSLN-202ENST00000545450 COL6A5A8TX70 2615 aa13.02□□□□□ -0.33
MSLN-202ENST00000545450 OXLD1Q5BKU9 147 aa13.02□□□□□ -0.33
MSLN-202ENST00000545450 TRGV4A0A0C4DH28 118 aa13.01□□□□□ -0.33
MSLN-202ENST00000545450 IGKV3D-7A0A0C4DH55 119 aa13.01□□□□□ -0.33
MSLN-202ENST00000545450 NCR3O14931 201 aa13.01□□□□□ -0.33
MSLN-202ENST00000545450 A0A1B0GX51 115 aa13.01□□□□□ -0.33
MSLN-202ENST00000545450 X6R8D5 127 aa13.01□□□□□ -0.33
MSLN-202ENST00000545450 CFAP161Q6P656 301 aa13□□□□□ -0.33
MSLN-202ENST00000545450 OR13C6PQ8NH95 151 aa13□□□□□ -0.33
MSLN-202ENST00000545450 SLPIP03973 132 aa12.99□□□□□ -0.33
MSLN-202ENST00000545450 FHL2Q14192 279 aa12.99□□□□□ -0.33
MSLN-202ENST00000545450 SS18Q15532 418 aa12.99□□□□□ -0.33
MSLN-202ENST00000545450 KIR2DL5BQ8NHK3 375 aa12.98□□□□□ -0.33
MSLN-202ENST00000545450 ORMDL1Q9P0S3 153 aa12.98□□□□□ -0.33
MSLN-202ENST00000545450 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
MSLN-202ENST00000545450 DEFB135Q30KP9 77 aa12.98□□□□□ -0.33
MSLN-202ENST00000545450 ANK2Q01484 3957 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 hADV29S1A0JD25 119 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 LINC01561Q8N1V8 128 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 APOC4P55056 127 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 KRTAP10-11P60412 298 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 C6orf226Q5I0X4 101 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 LINC00167Q96N53 147 aa12.97□□□□□ -0.33
MSLN-202ENST00000545450 LOC107984640A0A0U1RRK4 108 aa12.96□□□□□ -0.33
MSLN-202ENST00000545450 J3KT08 172 aa12.96□□□□□ -0.33
MSLN-202ENST00000545450 CCKP06307 115 aa12.96□□□□□ -0.33
MSLN-202ENST00000545450 SERP2Q8N6R1 65 aa12.96□□□□□ -0.33
MSLN-202ENST00000545450 A0A087WVE0 104 aa12.95□□□□□ -0.34
MSLN-202ENST00000545450 RPS28P62857 69 aaKnown RBP12.94□□□□□ -0.34
MSLN-202ENST00000545450 CYSTM1Q9H1C7 97 aa12.94□□□□□ -0.34
MSLN-202ENST00000545450 DNAH3Q8TD57 4116 aa12.94□□□□□ -0.34
MSLN-202ENST00000545450 SMIM9A6NGZ8 99 aa12.94□□□□□ -0.34
MSLN-202ENST00000545450 UPK3BQ9BT76 320 aa12.93□□□□□ -0.34
MSLN-202ENST00000545450 USP17L23D6RBM5 183 aa12.92□□□□□ -0.34
MSLN-202ENST00000545450 NANOS2P60321 138 aaKnown RBP12.92□□□□□ -0.34
MSLN-202ENST00000545450 LINC00612Q8N6U2 182 aa12.92□□□□□ -0.34
MSLN-202ENST00000545450 C11orf68Q9H3H3 251 aaKnown RBP12.92□□□□□ -0.34
MSLN-202ENST00000545450 DEFB130BP0DP73 79 aa12.91□□□□□ -0.34
MSLN-202ENST00000545450 DEFB130AP0DP74 79 aa12.91□□□□□ -0.34
MSLN-202ENST00000545450 EGFEM1PQ0D2K5 195 aa12.91□□□□□ -0.34
MSLN-202ENST00000545450 Q8IZM0 81 aa12.91□□□□□ -0.34
MSLN-202ENST00000545450 JMJD7-PLA2G4BH0Y9G9 81 aa12.9□□□□□ -0.34
MSLN-202ENST00000545450 DEFB4AO15263 64 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms