RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 LINC01561Q8N1V8 128 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 OSTCQ9NRP0 149 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 TP73-AS1Q9UF72 201 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 LINC00862A6NCI5 91 aa5.37□□□□□ -1.55
C2CD3-220ENST00000544293 PPP1R2P9O14990 202 aa5.37□□□□□ -1.55
C2CD3-220ENST00000544293 RIGQ13278 110 aa5.37□□□□□ -1.55
C2CD3-220ENST00000544293 KRTAP13-3Q3SY46 172 aa5.37□□□□□ -1.55
C2CD3-220ENST00000544293 BORCS7Q96B45 105 aa5.37□□□□□ -1.55
C2CD3-220ENST00000544293 SMIM2Q9BVW6 85 aa5.37□□□□□ -1.55
C2CD3-220ENST00000544293 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
C2CD3-220ENST00000544293 NPYP01303 97 aa5.36□□□□□ -1.55
C2CD3-220ENST00000544293 PYGO1Q9Y3Y4 419 aa5.36□□□□□ -1.55
C2CD3-220ENST00000544293 CTAG1AP78358 180 aa5.35□□□□□ -1.55
C2CD3-220ENST00000544293 RGS21Q2M5E4 152 aa5.35□□□□□ -1.55
C2CD3-220ENST00000544293 C3orf22Q8N5N4 141 aa5.35□□□□□ -1.55
C2CD3-220ENST00000544293 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
C2CD3-220ENST00000544293 BATF3Q9NR55 127 aa5.35□□□□□ -1.55
C2CD3-220ENST00000544293 GAGE10A6NGK3 116 aa5.34□□□□□ -1.55
C2CD3-220ENST00000544293 CKS2P33552 79 aa5.34□□□□□ -1.55
C2CD3-220ENST00000544293 AMELXQ99217 191 aa5.34□□□□□ -1.55
C2CD3-220ENST00000544293 EIF5A2Q9GZV4 153 aaKnown RBP5.34□□□□□ -1.55
C2CD3-220ENST00000544293 IGLV5-37A0A075B6J1 123 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 D6R8Y8 96 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 SCO1O75880 301 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 CEBPGP53567 150 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 FAM74A3Q4VXF1 159 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 SLC51BQ86UW2 128 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 Q8IZM0 81 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 NAT8BQ9UHF3 227 aa5.33□□□□□ -1.56
C2CD3-220ENST00000544293 SMIM27A0A1W2PRY6 76 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 SRP19P09132 144 aaKnown RBP5.32□□□□□ -1.56
C2CD3-220ENST00000544293 IFI27P40305 119 aaPredicted RBP5.32□□□□□ -1.56
C2CD3-220ENST00000544293 MT1HP80294 61 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 C6orf226Q5I0X4 101 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 C2orf66Q6UXQ4 117 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 Q6ZN92 141 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 TMEM141Q96I45 108 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 SMIM7Q9BQ49 75 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 TOMM7Q9P0U1 55 aa5.32□□□□□ -1.56
C2CD3-220ENST00000544293 IGKV2D-26A0A0A0MRZ7 120 aa5.31□□□□□ -1.56
C2CD3-220ENST00000544293 A0A1B0GXF2 115 aa5.31□□□□□ -1.56
C2CD3-220ENST00000544293 CKS1BP61024 79 aa5.31□□□□□ -1.56
C2CD3-220ENST00000544293 PNRC1Q12796 327 aaPredicted RBP5.31□□□□□ -1.56
C2CD3-220ENST00000544293 ALKBH7Q9BT30 221 aaPredicted RBP5.31□□□□□ -1.56
C2CD3-220ENST00000544293 CDKN2A-AS1Q9UH64 79 aa5.31□□□□□ -1.56
C2CD3-220ENST00000544293 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
C2CD3-220ENST00000544293 PRSS47A8MTI9 375 aa5.3□□□□□ -1.56
C2CD3-220ENST00000544293 C9JQL5 133 aa5.3□□□□□ -1.56
C2CD3-220ENST00000544293 F8VRH5 84 aa5.3□□□□□ -1.56
C2CD3-220ENST00000544293 UBE2AP49459 152 aa5.3□□□□□ -1.56
C2CD3-220ENST00000544293 RPL23P62829 140 aaKnown RBP5.3□□□□□ -1.56
C2CD3-220ENST00000544293 PRLHP81277 87 aa5.3□□□□□ -1.56
C2CD3-220ENST00000544293 TEX43Q6ZNM6 134 aa5.3□□□□□ -1.56
C2CD3-220ENST00000544293 FP248Q71RG6 208 aaPredicted RBP5.3□□□□□ -1.56
C2CD3-220ENST00000544293 PRSS2P07478 247 aa5.29□□□□□ -1.56
C2CD3-220ENST00000544293 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
C2CD3-220ENST00000544293 MRPL54Q6P161 138 aaKnown RBP5.28□□□□□ -1.56
C2CD3-220ENST00000544293 ALKAL2Q6UX46 152 aa5.28□□□□□ -1.56
C2CD3-220ENST00000544293 LINC00337Q8N6G1 96 aa5.28□□□□□ -1.56
C2CD3-220ENST00000544293 Q8NDZ9 215 aa5.28□□□□□ -1.56
C2CD3-220ENST00000544293 IGKV2-28A0A075B6P5 120 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 A0A1B0GW15 77 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 M0R378 163 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 IGKV2D-28P01615 120 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 RAB5AP20339 215 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 BLOC1S1P78537 153 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 TMEM136Q6ZRR5 245 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 TCTE3Q8IZS6 198 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 VCX2Q9H322 139 aa5.27□□□□□ -1.57
C2CD3-220ENST00000544293 LOC389332A0A1B0GUA5 103 aa5.26□□□□□ -1.57
C2CD3-220ENST00000544293 PPBPP02775 128 aa5.26□□□□□ -1.57
C2CD3-220ENST00000544293 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
C2CD3-220ENST00000544293 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
C2CD3-220ENST00000544293 PRELID3AQ96N28 172 aa5.26□□□□□ -1.57
C2CD3-220ENST00000544293 TMEM126AQ9H061 195 aa5.26□□□□□ -1.57
C2CD3-220ENST00000544293 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
C2CD3-220ENST00000544293 VPREB1P12018 145 aa5.25□□□□□ -1.57
C2CD3-220ENST00000544293 RAB5BP61020 215 aa5.25□□□□□ -1.57
C2CD3-220ENST00000544293 FAM19A1Q7Z5A9 133 aa5.25□□□□□ -1.57
C2CD3-220ENST00000544293 ORMDL3Q8N138 153 aa5.25□□□□□ -1.57
C2CD3-220ENST00000544293 DAND5Q8N907 189 aa5.25□□□□□ -1.57
C2CD3-220ENST00000544293 C2orf88Q9BSF0 95 aa5.25□□□□□ -1.57
C2CD3-220ENST00000544293 NPSP0C0P6 89 aa5.24□□□□□ -1.57
C2CD3-220ENST00000544293 HERVK_113P63121 156 aa5.24□□□□□ -1.57
C2CD3-220ENST00000544293 Q8N8P6 123 aa5.24□□□□□ -1.57
C2CD3-220ENST00000544293 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
C2CD3-220ENST00000544293 CYSLTR1Q9Y271 337 aa5.24□□□□□ -1.57
C2CD3-220ENST00000544293 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
C2CD3-220ENST00000544293 F8W036 122 aa5.23□□□□□ -1.57
C2CD3-220ENST00000544293 CXCL5P42830 114 aa5.23□□□□□ -1.57
C2CD3-220ENST00000544293 ADIRFQ15847 76 aa5.23□□□□□ -1.57
C2CD3-220ENST00000544293 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
C2CD3-220ENST00000544293 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
C2CD3-220ENST00000544293 CBLN2Q8IUK8 224 aa5.22□□□□□ -1.57
C2CD3-220ENST00000544293 NKAPP1Q8N9T2 125 aa5.22□□□□□ -1.57
C2CD3-220ENST00000544293 Q8NBF4 154 aa5.22□□□□□ -1.57
C2CD3-220ENST00000544293 COX7B2Q8TF08 81 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms