RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
HCFC2-202ENST00000544223 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
HCFC2-202ENST00000544223 C9orf116Q5BN46 136 aaPredicted RBP9.26□□□□□ -0.93
HCFC2-202ENST00000544223 TSPAN13O95857 204 aa9.25□□□□□ -0.93
HCFC2-202ENST00000544223 MIAQ16674 131 aa9.25□□□□□ -0.93
HCFC2-202ENST00000544223 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
HCFC2-202ENST00000544223 A0A1B0GWB2 263 aa9.24□□□□□ -0.93
HCFC2-202ENST00000544223 FOXI1Q12951 378 aa9.24□□□□□ -0.93
HCFC2-202ENST00000544223 FBN3Q75N90 2809 aa9.24□□□□□ -0.93
HCFC2-202ENST00000544223 GAGE10A6NGK3 116 aa9.24□□□□□ -0.93
HCFC2-202ENST00000544223 MALP21145 153 aa9.24□□□□□ -0.93
HCFC2-202ENST00000544223 SPCS1Q9Y6A9 102 aa9.24□□□□□ -0.93
HCFC2-202ENST00000544223 LOC107984156A0A0G2JMH3 177 aa9.23□□□□□ -0.93
HCFC2-202ENST00000544223 COX7A2LO14548 114 aa9.23□□□□□ -0.93
HCFC2-202ENST00000544223 CD164L2Q6UWJ8 174 aa9.23□□□□□ -0.93
HCFC2-202ENST00000544223 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
HCFC2-202ENST00000544223 ARL17AQ8IVW1 177 aa9.23□□□□□ -0.93
HCFC2-202ENST00000544223 Q9HAA7 133 aa9.23□□□□□ -0.93
HCFC2-202ENST00000544223 TRAV10A0A0B4J240 114 aa9.22□□□□□ -0.93
HCFC2-202ENST00000544223 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
HCFC2-202ENST00000544223 H3BNG1 76 aa9.22□□□□□ -0.93
HCFC2-202ENST00000544223 FABP2P12104 132 aa9.22□□□□□ -0.93
HCFC2-202ENST00000544223 LINC00158P58513 81 aa9.22□□□□□ -0.93
HCFC2-202ENST00000544223 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
HCFC2-202ENST00000544223 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
HCFC2-202ENST00000544223 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
HCFC2-202ENST00000544223 RNF151Q2KHN1 245 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 PRR34Q9NV39 138 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 H3BMG7 143 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 CRPP02741 224 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 OCIAD2Q56VL3 154 aa9.21□□□□□ -0.94
HCFC2-202ENST00000544223 PRO1854Q9UHT4 67 aa9.2□□□□□ -0.94
HCFC2-202ENST00000544223 CIRBPQ14011 172 aaKnown RBP9.2□□□□□ -0.94
HCFC2-202ENST00000544223 KIAA0087Q14695 138 aa9.2□□□□□ -0.94
HCFC2-202ENST00000544223 K7EP34 96 aa9.19□□□□□ -0.94
HCFC2-202ENST00000544223 HIGD2BQ4VC39 106 aa9.19□□□□□ -0.94
HCFC2-202ENST00000544223 Q1RN00 199 aa9.19□□□□□ -0.94
HCFC2-202ENST00000544223 DYNC2H1Q8NCM8 4307 aaKnown RBP9.18□□□□□ -0.94
HCFC2-202ENST00000544223 UNQ6190/PRO20217Q6UXQ8 127 aa9.18□□□□□ -0.94
HCFC2-202ENST00000544223 CKS1BP61024 79 aa9.17□□□□□ -0.94
HCFC2-202ENST00000544223 VPS25Q9BRG1 176 aa9.17□□□□□ -0.94
HCFC2-202ENST00000544223 KMT2AQ03164 3969 aa9.17□□□□□ -0.94
HCFC2-202ENST00000544223 PRR3P79522 188 aaKnown RBP9.16□□□□□ -0.94
HCFC2-202ENST00000544223 B9D2Q9BPU9 175 aa9.16□□□□□ -0.94
HCFC2-202ENST00000544223 IGKV2D-24A0A075B6R9 120 aa9.16□□□□□ -0.94
HCFC2-202ENST00000544223 TIMM17BO60830 172 aa9.16□□□□□ -0.94
HCFC2-202ENST00000544223 PSMB2P49721 201 aa9.16□□□□□ -0.94
HCFC2-202ENST00000544223 ERG28Q9UKR5 140 aa9.16□□□□□ -0.94
HCFC2-202ENST00000544223 K7ERU9 68 aa9.15□□□□□ -0.94
HCFC2-202ENST00000544223 CASC10Q5T4H9 136 aa9.15□□□□□ -0.94
HCFC2-202ENST00000544223 Q8IZM0 81 aa9.15□□□□□ -0.94
HCFC2-202ENST00000544223 HERV-K104P63124 156 aa9.15□□□□□ -0.94
HCFC2-202ENST00000544223 SPAG11BQ08648 103 aa9.15□□□□□ -0.94
HCFC2-202ENST00000544223 GTF2H5Q6ZYL4 71 aa9.15□□□□□ -0.94
HCFC2-202ENST00000544223 RPL13AP40429 203 aaKnown RBP9.14□□□□□ -0.95
HCFC2-202ENST00000544223 SCGB1C2P0DMR2 95 aa9.14□□□□□ -0.95
HCFC2-202ENST00000544223 CCL18P55774 89 aa9.14□□□□□ -0.95
HCFC2-202ENST00000544223 KRTAP26-1Q6PEX3 210 aa9.14□□□□□ -0.95
HCFC2-202ENST00000544223 A0A0B4J2C4 111 aa9.13□□□□□ -0.95
HCFC2-202ENST00000544223 LECT2O14960 151 aa9.13□□□□□ -0.95
HCFC2-202ENST00000544223 TRIAP1O43715 76 aa9.13□□□□□ -0.95
HCFC2-202ENST00000544223 TCL1BO95988 128 aa9.13□□□□□ -0.95
HCFC2-202ENST00000544223 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
HCFC2-202ENST00000544223 LINC01556Q5JQF7 62 aa9.12□□□□□ -0.95
HCFC2-202ENST00000544223 Q8NDZ9 215 aa9.12□□□□□ -0.95
HCFC2-202ENST00000544223 IGKV2-28A0A075B6P5 120 aa9.11□□□□□ -0.95
HCFC2-202ENST00000544223 IGKV2D-28P01615 120 aa9.11□□□□□ -0.95
HCFC2-202ENST00000544223 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
HCFC2-202ENST00000544223 WFDC2Q14508 124 aa9.11□□□□□ -0.95
HCFC2-202ENST00000544223 LINC00337Q8N6G1 96 aa9.11□□□□□ -0.95
HCFC2-202ENST00000544223 C15orf53Q8NAA6 179 aa9.11□□□□□ -0.95
HCFC2-202ENST00000544223 IBA57-AS1B1ANH7 110 aa9.1□□□□□ -0.95
HCFC2-202ENST00000544223 IFITM1P13164 125 aa9.1□□□□□ -0.95
HCFC2-202ENST00000544223 CLEC2BQ92478 149 aa9.1□□□□□ -0.95
HCFC2-202ENST00000544223 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
HCFC2-202ENST00000544223 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
HCFC2-202ENST00000544223 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
HCFC2-202ENST00000544223 DNAH10OSP0CZ25 163 aa9.09□□□□□ -0.95
HCFC2-202ENST00000544223 KLK5Q9Y337 293 aaPredicted RBP9.09□□□□□ -0.95
HCFC2-202ENST00000544223 TRAV8-4A0A0B4J246 113 aa9.08□□□□□ -0.96
HCFC2-202ENST00000544223 XAGE1AQ9HD64 81 aa9.08□□□□□ -0.96
HCFC2-202ENST00000544223 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
HCFC2-202ENST00000544223 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
HCFC2-202ENST00000544223 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
HCFC2-202ENST00000544223 Q6ZRU5 148 aa9.05□□□□□ -0.96
HCFC2-202ENST00000544223 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
HCFC2-202ENST00000544223 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
HCFC2-202ENST00000544223 LINC01561Q8N1V8 128 aa9.05□□□□□ -0.96
HCFC2-202ENST00000544223 OR13C6PQ8NH95 151 aa9.05□□□□□ -0.96
HCFC2-202ENST00000544223 CAMK2N2Q96S95 79 aa9.05□□□□□ -0.96
HCFC2-202ENST00000544223 PRO0461Q9UI25 63 aa9.05□□□□□ -0.96
HCFC2-202ENST00000544223 NCR3O14931 201 aa9.04□□□□□ -0.96
HCFC2-202ENST00000544223 DNAH2Q9P225 4427 aa9.04□□□□□ -0.96
HCFC2-202ENST00000544223 ETDBQ3ZM63 59 aa9.04□□□□□ -0.96
HCFC2-202ENST00000544223 UBE2DNLQ8IWF7 75 aa9.04□□□□□ -0.96
HCFC2-202ENST00000544223 VPS13DQ5THJ4 4388 aa9.02□□□□□ -0.97
HCFC2-202ENST00000544223 SLPIP03973 132 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 270.5 ms