RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 HIST1H2BBP33778 126 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 HIST1H2BDP58876 126 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 DEFA3P59666 94 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 NCS1P62166 190 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 HIST1H2BCP62807 126 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 HIST2H2BEQ16778 126 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 HIST1H2BHQ93079 126 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 TVP23CQ96ET8 276 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 HIST1H2BNQ99877 126 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 HIST1H2BMQ99879 126 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 SMIM3Q9BZL3 60 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 PRR34Q9NV39 138 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 NAT8BQ9UHF3 227 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 SCP2D1Q9UJQ7 156 aa2.92□□□□□ -1.94
NPIPB4-219ENST00000543660 IGKV2-24A0A0C4DH68 120 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 TMEM223A0PJW6 202 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 FAM24AA6NFZ4 105 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 F6UZH7 168 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 SFT2D2O95562 160 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 RNASE3P12724 160 aaKnown RBP2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 CSN1S1P47710 185 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 SLC25A34Q6PIV7 304 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 RASL11AQ6T310 242 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 SLC25A21Q9BQT8 299 aaPredicted RBP2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 NAT8Q9UHE5 227 aa2.91□□□□□ -1.94
NPIPB4-219ENST00000543660 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.94
NPIPB4-219ENST00000543660 TRBV6-8A0A0A6YYG3 113 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 C7orf66A4D0T2 115 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 A8MWV9 139 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 PLA2G10O15496 165 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 ZNF80P51504 273 aaPredicted RBP2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 UBE2D3P61077 147 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 UBE2D2P62837 147 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 EIF5AP63241 154 aaKnown RBP2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 CCL20P78556 96 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 CLPSL2Q6UWE3 100 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 MIR17HGQ75NE6 70 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 AMN1Q8IY45 258 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 LINC00269Q8N2A0 174 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 XAGE1AQ9HD64 81 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 ERG28Q9UKR5 140 aa2.9□□□□□ -1.95
NPIPB4-219ENST00000543660 IGLV10-54A0A075B6I4 117 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 A0A096LNI7 61 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 C20orf202A1L168 122 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 CST7O76096 145 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 RPS10P46783 165 aaKnown RBP2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 HIST1H4AP62805 103 aaKnown RBP2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 LGALSLQ3ZCW2 172 aaPredicted RBP2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 LCA10Q71F78 164 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 KTN1-AS1Q86SY8 53 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 LINC01551Q86U37 167 aa2.89□□□□□ -1.95
NPIPB4-219ENST00000543660 TRBV7-3A0A075B6L6 115 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 IGKV2D-30A0A075B6S6 120 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 TRBV10-1A0A0K0K1A3 114 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 A0A1B0GVX0 72 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 IFITM10A6NMD0 228 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 TAX1BP3O14907 124 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 BCL2L11O43521 198 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 TRGC2P03986 189 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 PRR15Q8IV56 129 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 C15orf56Q8N910 161 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 Q8N9P0 234 aaPredicted RBP2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 HYLS1Q96M11 299 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 NDFIP1Q9BT67 221 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 GFRA4Q9GZZ7 299 aa2.88□□□□□ -1.95
NPIPB4-219ENST00000543660 IGKV3D-20A0A0C4DH25 116 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 UBE2L5PA0A1B0GUS4 154 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 C9orf170A2RU37 121 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 GRIFINA4D1Z8 144 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 FABP5P3A8MUU1 101 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 NTF3P20783 257 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 S100A10P60903 97 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 PKIAP61925 76 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 DNLZQ5SXM8 178 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 ZC2HC1BQ5TFG8 222 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 HRCT1Q6UXD1 115 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 NTM-AS1Q6ZSK4 140 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 DAND5Q8N907 189 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 NPCDR1Q9BY65 106 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 NMES1Q9C002 83 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 C11orf1Q9H5F2 150 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 IL36BQ9NZH7 164 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 OR5AC2Q9NZP5 309 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 LINC00474Q9P2X8 69 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 PHLDA3Q9Y5J5 127 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 TRAPPC1Q9Y5R8 145 aa2.87□□□□□ -1.95
NPIPB4-219ENST00000543660 GZMBP10144 247 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 FGF7P21781 194 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 RAB5CP51148 216 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 UBE2L3P68036 154 aaKnown RBP2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 FAM74A4Q5TZK3 123 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 OR5C1Q8NGR4 320 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 CMTM2Q8TAZ6 248 aa2.86□□□□□ -1.95
NPIPB4-219ENST00000543660 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms