RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 ZNF561-AS1K7EIQ3 104 aa8.11□□□□□ -1.11
CDH4-201ENST00000543233 J3QKU1 62 aa8.1□□□□□ -1.11
CDH4-201ENST00000543233 CFHR3Q02985 330 aa8.1□□□□□ -1.11
CDH4-201ENST00000543233 IGHV1OR15-1A0A075B7D0 117 aa8.1□□□□□ -1.11
CDH4-201ENST00000543233 UBL5Q9BZL1 73 aa8.1□□□□□ -1.11
CDH4-201ENST00000543233 IGHV3-73A0A0B4J1V6 119 aa8.09□□□□□ -1.11
CDH4-201ENST00000543233 DSCR9P59020 149 aa8.09□□□□□ -1.11
CDH4-201ENST00000543233 IGHV4-31P0DP07 118 aa8.09□□□□□ -1.11
CDH4-201ENST00000543233 PF4P02776 101 aa8.09□□□□□ -1.11
CDH4-201ENST00000543233 MIR7-3HGQ8N6C7 128 aa8.09□□□□□ -1.11
CDH4-201ENST00000543233 LRCOL1A6NCL2 159 aa8.08□□□□□ -1.12
CDH4-201ENST00000543233 LINC00315P59091 139 aa8.08□□□□□ -1.12
CDH4-201ENST00000543233 HAMPP81172 84 aa8.08□□□□□ -1.12
CDH4-201ENST00000543233 KLKP1Q107X0 134 aa8.08□□□□□ -1.12
CDH4-201ENST00000543233 LENEPQ9Y5L5 61 aa8.08□□□□□ -1.12
CDH4-201ENST00000543233 C11orf68Q9H3H3 251 aaKnown RBP8.08□□□□□ -1.12
CDH4-201ENST00000543233 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
CDH4-201ENST00000543233 A0A096LNT2 108 aa8.07□□□□□ -1.12
CDH4-201ENST00000543233 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
CDH4-201ENST00000543233 ATP5EP2Q5VTU8 51 aa8.07□□□□□ -1.12
CDH4-201ENST00000543233 KIF25-AS1Q9Y6Z4 181 aa8.07□□□□□ -1.12
CDH4-201ENST00000543233 TRAV10A0A0B4J240 114 aa8.07□□□□□ -1.12
CDH4-201ENST00000543233 PLAC8L1A1L4L8 177 aa8.07□□□□□ -1.12
CDH4-201ENST00000543233 ZNF702PQ9H963 129 aa8.07□□□□□ -1.12
CDH4-201ENST00000543233 DEFB131AP59861 70 aa8.06□□□□□ -1.12
CDH4-201ENST00000543233 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
CDH4-201ENST00000543233 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
CDH4-201ENST00000543233 APRG1Q8IVJ8 170 aa8.06□□□□□ -1.12
CDH4-201ENST00000543233 OVOL2Q9BRP0 275 aa8.06□□□□□ -1.12
CDH4-201ENST00000543233 TEP1Q99973 2627 aaKnown RBP8.06□□□□□ -1.12
CDH4-201ENST00000543233 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 NDUFA1O15239 70 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 DEFB113Q30KQ7 82 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 K7EMT4 169 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 KLLNB2CW77 178 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 MIFP14174 115 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 CR1P17927 2039 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 Q6YL49 198 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
CDH4-201ENST00000543233 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.04□□□□□ -1.12
CDH4-201ENST00000543233 IGKV2-29A2NJV5 120 aaPredicted RBP8.04□□□□□ -1.12
CDH4-201ENST00000543233 ORMDL1Q9P0S3 153 aa8.04□□□□□ -1.12
CDH4-201ENST00000543233 IGHV3OR16-12A0A075B7B8 117 aa8.04□□□□□ -1.12
CDH4-201ENST00000543233 OXLD1Q5BKU9 147 aa8.04□□□□□ -1.12
CDH4-201ENST00000543233 K7EQG2 157 aa8.03□□□□□ -1.12
CDH4-201ENST00000543233 ATP5EP56381 51 aaPredicted RBP8.03□□□□□ -1.12
CDH4-201ENST00000543233 ESRGQ1W209 222 aa8.03□□□□□ -1.12
CDH4-201ENST00000543233 DGAT2L7PQ6IED9 249 aa8.03□□□□□ -1.12
CDH4-201ENST00000543233 M0QY20 66 aa8.03□□□□□ -1.12
CDH4-201ENST00000543233 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
CDH4-201ENST00000543233 TRBV6-5A0A0K0K1A5 114 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 PSPHP1O15172 72 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 NDUFC1O43677 76 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 MED14OSP0DP75 135 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 PROK1P58294 105 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 STHQ8IWL8 128 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 DYNLRB2Q8TF09 96 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 NBEAL2Q6ZNJ1 2754 aa8.02□□□□□ -1.13
CDH4-201ENST00000543233 C11orf72Q8NBR9 251 aa8.01□□□□□ -1.13
CDH4-201ENST00000543233 UBE2E2Q96LR5 201 aa8.01□□□□□ -1.13
CDH4-201ENST00000543233 TM2D3Q9BRN9 247 aa8.01□□□□□ -1.13
CDH4-201ENST00000543233 IGHV3-16A0A0C4DH30 117 aa8.01□□□□□ -1.13
CDH4-201ENST00000543233 Q6ZTI0 123 aa8.01□□□□□ -1.13
CDH4-201ENST00000543233 Q6ZRU5 148 aa8□□□□□ -1.13
CDH4-201ENST00000543233 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
CDH4-201ENST00000543233 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
CDH4-201ENST00000543233 SCXQ7RTU7 201 aa7.99□□□□□ -1.13
CDH4-201ENST00000543233 C6orf223Q8N319 242 aa7.99□□□□□ -1.13
CDH4-201ENST00000543233 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.99□□□□□ -1.13
CDH4-201ENST00000543233 Q9UF83 564 aa7.99□□□□□ -1.13
CDH4-201ENST00000543233 IGHV3-38A0A0C4DH36 116 aa7.99□□□□□ -1.13
CDH4-201ENST00000543233 FUSP35637 526 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDH4-201ENST00000543233 AKAP9Q99996 3911 aa7.99□□□□□ -1.13
CDH4-201ENST00000543233 H0YGX0 51 aa7.98□□□□□ -1.13
CDH4-201ENST00000543233 LAMTOR3Q9UHA4 124 aa7.98□□□□□ -1.13
CDH4-201ENST00000543233 TOMM7Q9P0U1 55 aa7.98□□□□□ -1.13
CDH4-201ENST00000543233 PRB2P02812 416 aaPredicted RBP7.97□□□□□ -1.13
CDH4-201ENST00000543233 OBSCN-AS1Q96MR7 158 aa7.97□□□□□ -1.13
CDH4-201ENST00000543233 MAST4O15021 2626 aa7.97□□□□□ -1.13
CDH4-201ENST00000543233 COX6A2Q02221 97 aa7.97□□□□□ -1.13
CDH4-201ENST00000543233 Q8N3U1 123 aa7.97□□□□□ -1.13
CDH4-201ENST00000543233 C11orf45Q8TAV5 145 aa7.97□□□□□ -1.13
CDH4-201ENST00000543233 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
CDH4-201ENST00000543233 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
CDH4-201ENST00000543233 FSHBP01225 129 aa7.96□□□□□ -1.13
CDH4-201ENST00000543233 LINC00158P58513 81 aa7.96□□□□□ -1.14
CDH4-201ENST00000543233 TRBV10-3A0A0K0K1G6 114 aa7.96□□□□□ -1.14
CDH4-201ENST00000543233 JMJD7-PLA2G4BH0Y9G9 81 aa7.96□□□□□ -1.14
CDH4-201ENST00000543233 DNAJC9-AS1A6NH13 148 aa7.95□□□□□ -1.14
CDH4-201ENST00000543233 NREPQ16612 68 aa7.95□□□□□ -1.14
CDH4-201ENST00000543233 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
CDH4-201ENST00000543233 FAM104AQ969W3 186 aa7.95□□□□□ -1.14
CDH4-201ENST00000543233 OTOGQ6ZRI0 2925 aa7.95□□□□□ -1.14
CDH4-201ENST00000543233 PDZD2O15018 2839 aa7.94□□□□□ -1.14
CDH4-201ENST00000543233 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
CDH4-201ENST00000543233 LINC00467Q9BRT7 94 aa7.94□□□□□ -1.14
CDH4-201ENST00000543233 ESM1Q9NQ30 184 aa7.94□□□□□ -1.14
CDH4-201ENST00000543233 C1orf158Q8N1D5 194 aa7.94□□□□□ -1.14
CDH4-201ENST00000543233 IGHV3-53P01767 116 aa7.94□□□□□ -1.14
CDH4-201ENST00000543233 MAP6D1Q9H9H5 199 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms