RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 C6orf223Q8N319 242 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 TMEM101Q96IK0 257 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 AMELXQ99217 191 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 TIMM17AQ99595 171 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 Q9HAA7 133 aa4.5□□□□□ -1.69
PAAF1-212ENST00000543079 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 LINC01549A6NIU2 74 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 CFC1BP0CG36 223 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 CFC1P0CG37 223 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 MIAQ16674 131 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 Q5VSD8 79 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 TMEM141Q96I45 108 aa4.49□□□□□ -1.69
PAAF1-212ENST00000543079 IGLV10-54A0A075B6I4 117 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 IGLV5-45A0A087WSX0 123 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 TRAV8-4A0A0B4J246 113 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 IGKV3OR2-268A0A0C4DH90 116 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 CRPP02741 224 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 SPATA12Q7Z6I5 190 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 NFE4Q86UQ8 179 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 BAALCQ8WXS3 180 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 CST9LQ9H4G1 147 aa4.48□□□□□ -1.69
PAAF1-212ENST00000543079 IGKV2D-24A0A075B6R9 120 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 LRCOL1A6NCL2 159 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.47□□□□□ -1.69
PAAF1-212ENST00000543079 CCL25O15444 150 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 ATP5LO75964 103 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 UBE2D1P51668 147 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 COX6A2Q02221 97 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 LINC00242Q5T6M2 205 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 TEX43Q6ZNM6 134 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 FAM19A3Q7Z5A8 133 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
PAAF1-212ENST00000543079 IFI27L1Q96BM0 104 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 VCX2Q9H322 139 aa4.47□□□□□ -1.69
PAAF1-212ENST00000543079 IGHV3OR16-9A0A0B4J2B5 98 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 LEPROTL1O95214 131 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 FABP4P15090 132 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 XCL1P47992 114 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 WFDC2Q14508 124 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 PMVKQ15126 192 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 SS18Q15532 418 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 Q6ZN92 141 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 HIST3H2BBQ8N257 126 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 RMI2Q96E14 147 aa4.46□□□□□ -1.7
PAAF1-212ENST00000543079 PACRGQ96M98 296 aaPredicted RBP4.46□□□□□ -1.7
PAAF1-212ENST00000543079 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
PAAF1-212ENST00000543079 IGLV4-69A0A075B6H9 119 aa4.45□□□□□ -1.7
PAAF1-212ENST00000543079 A0A0J9YXV3 536 aa4.45□□□□□ -1.7
PAAF1-212ENST00000543079 XGP55808 180 aa4.45□□□□□ -1.7
PAAF1-212ENST00000543079 C2orf88Q9BSF0 95 aa4.45□□□□□ -1.7
PAAF1-212ENST00000543079 HSPB8Q9UJY1 196 aa4.45□□□□□ -1.7
PAAF1-212ENST00000543079 VPS13BQ7Z7G8 4022 aa4.44□□□□□ -1.7
PAAF1-212ENST00000543079 A0A087WTM6 91 aa4.44□□□□□ -1.7
PAAF1-212ENST00000543079 TRAV12-1A0A0B4J245 112 aa4.44□□□□□ -1.7
PAAF1-212ENST00000543079 LECT2O14960 151 aa4.44□□□□□ -1.7
PAAF1-212ENST00000543079 PRSS1P07477 247 aa4.44□□□□□ -1.7
PAAF1-212ENST00000543079 HIST1H2BLQ99880 126 aa4.44□□□□□ -1.7
PAAF1-212ENST00000543079 A0A087WZ39 114 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 TINCRA0A1B0GVN0 87 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 C11orf86A6NJI1 115 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 PSCAO43653 123 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 SMR3BP02814 79 aaPredicted RBP4.43□□□□□ -1.7
PAAF1-212ENST00000543079 S100A6P06703 90 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 IGLC3P0DOY3 106 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 C5orf38Q86SI9 138 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 MRPL35Q9NZE8 188 aaKnown RBP4.43□□□□□ -1.7
PAAF1-212ENST00000543079 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 FAT1Q14517 4588 aa4.43□□□□□ -1.7
PAAF1-212ENST00000543079 F8VRH5 84 aa4.42□□□□□ -1.7
PAAF1-212ENST00000543079 COX7A2LO14548 114 aa4.42□□□□□ -1.7
PAAF1-212ENST00000543079 C3orf79P0CE67 100 aa4.42□□□□□ -1.7
PAAF1-212ENST00000543079 HERVK_113P63121 156 aa4.42□□□□□ -1.7
PAAF1-212ENST00000543079 SEC11AP67812 179 aa4.42□□□□□ -1.7
PAAF1-212ENST00000543079 MAP1LC3CQ9BXW4 147 aa4.42□□□□□ -1.7
PAAF1-212ENST00000543079 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
PAAF1-212ENST00000543079 GVQW2A0A096LPI5 108 aaPredicted RBP4.41□□□□□ -1.7
PAAF1-212ENST00000543079 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 H0Y8G0 127 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
PAAF1-212ENST00000543079 S100A2P29034 98 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 LINC01545Q5VT33 79 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 Q8N814 137 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 PMCHL2Q9BQD1 86 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 CHAC1Q9BUX1 264 aa4.41□□□□□ -1.7
PAAF1-212ENST00000543079 GEMIN7Q9H840 131 aaKnown RBP4.41□□□□□ -1.7
PAAF1-212ENST00000543079 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
PAAF1-212ENST00000543079 SMIM1B2RUZ4 78 aa4.4□□□□□ -1.71
PAAF1-212ENST00000543079 FUSP35637 526 aaKnown RBP eCLIP4.4□□□□□ -1.71
PAAF1-212ENST00000543079 LINC01547P58512 204 aaPredicted RBP4.4□□□□□ -1.71
PAAF1-212ENST00000543079 KRTDAPP60985 99 aa4.4□□□□□ -1.71
PAAF1-212ENST00000543079 KIAA0087Q14695 138 aa4.4□□□□□ -1.71
PAAF1-212ENST00000543079 HIGD2BQ4VC39 106 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms