RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 Q8IZM0 81 aa5.17□□□□□ -1.58
C2CD3-219ENST00000542930 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
C2CD3-219ENST00000542930 IGLV8-61A0A075B6I0 122 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 IGKV2-28A0A075B6P5 120 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 F8VRH5 84 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 TEX46H3BTG2 121 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 IGKV2D-28P01615 120 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 SLC51BQ86UW2 128 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 FAM19A2Q8N3H0 131 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 NKAPP1Q8N9T2 125 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 Q8NBF4 154 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 C20orf78Q9BR46 151 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 ALKBH7Q9BT30 221 aaPredicted RBP5.16□□□□□ -1.58
C2CD3-219ENST00000542930 GNB1LQ9BYB4 327 aa5.16□□□□□ -1.58
C2CD3-219ENST00000542930 HIGD1CA8MV81 97 aa5.15□□□□□ -1.59
C2CD3-219ENST00000542930 IFI27P40305 119 aaPredicted RBP5.15□□□□□ -1.59
C2CD3-219ENST00000542930 IGLV4-3A0A075B6K6 122 aa5.14□□□□□ -1.59
C2CD3-219ENST00000542930 TRBV24-1A0A075B6N3 115 aa5.14□□□□□ -1.59
C2CD3-219ENST00000542930 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
C2CD3-219ENST00000542930 ALKAL2Q6UX46 152 aa5.14□□□□□ -1.59
C2CD3-219ENST00000542930 CBLN2Q8IUK8 224 aa5.14□□□□□ -1.59
C2CD3-219ENST00000542930 TMEM126AQ9H061 195 aa5.14□□□□□ -1.59
C2CD3-219ENST00000542930 PYGO1Q9Y3Y4 419 aa5.14□□□□□ -1.59
C2CD3-219ENST00000542930 hCG_2014768A0A024R1R8 64 aa5.13□□□□□ -1.59
C2CD3-219ENST00000542930 LINC00862A6NCI5 91 aa5.13□□□□□ -1.59
C2CD3-219ENST00000542930 MRPL51Q4U2R6 128 aaKnown RBP5.13□□□□□ -1.59
C2CD3-219ENST00000542930 Q8N377 158 aa5.13□□□□□ -1.59
C2CD3-219ENST00000542930 TMEM141Q96I45 108 aa5.13□□□□□ -1.59
C2CD3-219ENST00000542930 SPRR4Q96PI1 79 aa5.13□□□□□ -1.59
C2CD3-219ENST00000542930 SMIM2Q9BVW6 85 aa5.13□□□□□ -1.59
C2CD3-219ENST00000542930 TMEM238C9JI98 176 aa5.12□□□□□ -1.59
C2CD3-219ENST00000542930 CXCL5P42830 114 aa5.12□□□□□ -1.59
C2CD3-219ENST00000542930 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
C2CD3-219ENST00000542930 RIGQ13278 110 aa5.12□□□□□ -1.59
C2CD3-219ENST00000542930 TEX43Q6ZNM6 134 aa5.12□□□□□ -1.59
C2CD3-219ENST00000542930 AKAP14Q86UN6 197 aa5.12□□□□□ -1.59
C2CD3-219ENST00000542930 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
C2CD3-219ENST00000542930 SLC25A20O43772 301 aa5.11□□□□□ -1.59
C2CD3-219ENST00000542930 SCO1O75880 301 aa5.11□□□□□ -1.59
C2CD3-219ENST00000542930 CKS2P33552 79 aa5.11□□□□□ -1.59
C2CD3-219ENST00000542930 TAGLN2P37802 199 aaKnown RBP5.11□□□□□ -1.59
C2CD3-219ENST00000542930 FAM104BQ5XKR9 115 aa5.11□□□□□ -1.59
C2CD3-219ENST00000542930 C2orf88Q9BSF0 95 aa5.11□□□□□ -1.59
C2CD3-219ENST00000542930 HIGD2AQ9BW72 106 aa5.11□□□□□ -1.59
C2CD3-219ENST00000542930 EIF5A2Q9GZV4 153 aaKnown RBP5.11□□□□□ -1.59
C2CD3-219ENST00000542930 TMEM250H0YL14 139 aa5.1□□□□□ -1.59
C2CD3-219ENST00000542930 M0R378 163 aa5.1□□□□□ -1.59
C2CD3-219ENST00000542930 CEBPGP53567 150 aa5.1□□□□□ -1.59
C2CD3-219ENST00000542930 ZNF706Q9Y5V0 76 aaPredicted RBP5.1□□□□□ -1.59
C2CD3-219ENST00000542930 SMCPP49901 116 aaPredicted RBP5.09□□□□□ -1.59
C2CD3-219ENST00000542930 BLOC1S1P78537 153 aa5.09□□□□□ -1.59
C2CD3-219ENST00000542930 COX6B2Q6YFQ2 88 aa5.09□□□□□ -1.59
C2CD3-219ENST00000542930 FAM19A3Q7Z5A8 133 aa5.09□□□□□ -1.59
C2CD3-219ENST00000542930 LINC01551Q86U37 167 aa5.09□□□□□ -1.59
C2CD3-219ENST00000542930 KRTAP4-16G5E9R7 235 aaPredicted RBP5.08□□□□□ -1.6
C2CD3-219ENST00000542930 SRP19P09132 144 aaKnown RBP5.08□□□□□ -1.6
C2CD3-219ENST00000542930 RAB5AP20339 215 aa5.08□□□□□ -1.6
C2CD3-219ENST00000542930 ZC2HC1BQ5TFG8 222 aa5.08□□□□□ -1.6
C2CD3-219ENST00000542930 AMELXQ99217 191 aa5.08□□□□□ -1.6
C2CD3-219ENST00000542930 GEMIN7Q9H840 131 aaKnown RBP5.08□□□□□ -1.6
C2CD3-219ENST00000542930 C9JQL5 133 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 RAB5BP61020 215 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 HERVK_113P63121 156 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 C2orf66Q6UXQ4 117 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 SMIM7Q9BQ49 75 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 VCX2Q9H322 139 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 CDKN2A-AS1Q9UH64 79 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 V9GYV3 84 aa5.07□□□□□ -1.6
C2CD3-219ENST00000542930 D6R8Y8 96 aa5.06□□□□□ -1.6
C2CD3-219ENST00000542930 NPYP01303 97 aa5.06□□□□□ -1.6
C2CD3-219ENST00000542930 CFC1P0CG37 223 aa5.06□□□□□ -1.6
C2CD3-219ENST00000542930 VPREB1P12018 145 aa5.06□□□□□ -1.6
C2CD3-219ENST00000542930 SEC11AP67812 179 aa5.06□□□□□ -1.6
C2CD3-219ENST00000542930 OSTCQ9NRP0 149 aa5.06□□□□□ -1.6
C2CD3-219ENST00000542930 NAT8BQ9UHF3 227 aa5.05□□□□□ -1.6
C2CD3-219ENST00000542930 NPSP0C0P6 89 aa5.04□□□□□ -1.6
C2CD3-219ENST00000542930 RPL23P62829 140 aaKnown RBP5.04□□□□□ -1.6
C2CD3-219ENST00000542930 RPL24P83731 157 aaKnown RBP5.04□□□□□ -1.6
C2CD3-219ENST00000542930 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
C2CD3-219ENST00000542930 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
C2CD3-219ENST00000542930 COX7B2Q8TF08 81 aa5.04□□□□□ -1.6
C2CD3-219ENST00000542930 A0A1B0GW15 77 aa5.03□□□□□ -1.6
C2CD3-219ENST00000542930 SMIM1B2RUZ4 78 aa5.03□□□□□ -1.6
C2CD3-219ENST00000542930 PPBPP02775 128 aa5.03□□□□□ -1.6
C2CD3-219ENST00000542930 MOBPQ13875 183 aa5.03□□□□□ -1.6
C2CD3-219ENST00000542930 LINC00483Q53H64 154 aa5.03□□□□□ -1.6
C2CD3-219ENST00000542930 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
C2CD3-219ENST00000542930 CYSLTR1Q9Y271 337 aa5.03□□□□□ -1.6
C2CD3-219ENST00000542930 FAM74A3Q4VXF1 159 aa5.02□□□□□ -1.61
C2CD3-219ENST00000542930 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
C2CD3-219ENST00000542930 SMIM27A0A1W2PRY6 76 aa5.01□□□□□ -1.61
C2CD3-219ENST00000542930 C9orf92A6NGG3 77 aa5.01□□□□□ -1.61
C2CD3-219ENST00000542930 IGIPA6NJ69 53 aa5.01□□□□□ -1.61
C2CD3-219ENST00000542930 F8W036 122 aa5.01□□□□□ -1.61
C2CD3-219ENST00000542930 ADIRFQ15847 76 aa5.01□□□□□ -1.61
C2CD3-219ENST00000542930 SMCR5Q8TEV8 140 aa5.01□□□□□ -1.61
C2CD3-219ENST00000542930 PRSS47A8MTI9 375 aa5□□□□□ -1.61
C2CD3-219ENST00000542930 ATP5LO75964 103 aa5□□□□□ -1.61
C2CD3-219ENST00000542930 PFN2P35080 140 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms