RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 SS18Q15532 418 aa9.4□□□□□ -0.9
SLC3A2-220ENST00000542922 COPS9Q8WXC6 57 aa9.4□□□□□ -0.9
SLC3A2-220ENST00000542922 MT-ATP8P03928 68 aa9.4□□□□□ -0.91
SLC3A2-220ENST00000542922 CCL18P55774 89 aa9.4□□□□□ -0.91
SLC3A2-220ENST00000542922 OXLD1Q5BKU9 147 aa9.4□□□□□ -0.91
SLC3A2-220ENST00000542922 LINC01600Q96MT4 127 aa9.4□□□□□ -0.91
SLC3A2-220ENST00000542922 SND1-IT1Q9HBX3 110 aa9.4□□□□□ -0.91
SLC3A2-220ENST00000542922 COX7A2LO14548 114 aa9.39□□□□□ -0.91
SLC3A2-220ENST00000542922 ATP5G1P05496 136 aa9.39□□□□□ -0.91
SLC3A2-220ENST00000542922 MIFP14174 115 aa9.39□□□□□ -0.91
SLC3A2-220ENST00000542922 FAM218AQ96MZ4 157 aa9.39□□□□□ -0.91
SLC3A2-220ENST00000542922 FLNBO75369 2602 aaKnown RBP9.39□□□□□ -0.91
SLC3A2-220ENST00000542922 RETNQ9HD89 108 aa9.39□□□□□ -0.91
SLC3A2-220ENST00000542922 ANGP03950 147 aaKnown RBP9.38□□□□□ -0.91
SLC3A2-220ENST00000542922 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
SLC3A2-220ENST00000542922 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
SLC3A2-220ENST00000542922 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
SLC3A2-220ENST00000542922 H3BT86 120 aa9.37□□□□□ -0.91
SLC3A2-220ENST00000542922 WIPF1O43516 503 aa9.37□□□□□ -0.91
SLC3A2-220ENST00000542922 CRPP02741 224 aa9.37□□□□□ -0.91
SLC3A2-220ENST00000542922 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
SLC3A2-220ENST00000542922 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
SLC3A2-220ENST00000542922 CHCHD10Q8WYQ3 142 aaPredicted RBP9.37□□□□□ -0.91
SLC3A2-220ENST00000542922 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
SLC3A2-220ENST00000542922 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
SLC3A2-220ENST00000542922 REG3AQ06141 175 aa9.36□□□□□ -0.91
SLC3A2-220ENST00000542922 PKD1L1Q8TDX9 2849 aa9.36□□□□□ -0.91
SLC3A2-220ENST00000542922 TRAV8-4A0A0B4J246 113 aa9.34□□□□□ -0.91
SLC3A2-220ENST00000542922 Q8IZM0 81 aa9.34□□□□□ -0.91
SLC3A2-220ENST00000542922 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.91
SLC3A2-220ENST00000542922 TRAV13-2A0A0B4J235 113 aa9.34□□□□□ -0.91
SLC3A2-220ENST00000542922 KIAA0087Q14695 138 aa9.34□□□□□ -0.91
SLC3A2-220ENST00000542922 SMIM11BQ8TCY0 68 aa9.34□□□□□ -0.91
SLC3A2-220ENST00000542922 TENM3Q9P273 2699 aa9.33□□□□□ -0.92
SLC3A2-220ENST00000542922 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
SLC3A2-220ENST00000542922 MRPL23Q16540 153 aaKnown RBP9.33□□□□□ -0.92
SLC3A2-220ENST00000542922 KRTAP24-1Q3LI83 254 aa9.33□□□□□ -0.92
SLC3A2-220ENST00000542922 CMYA5Q8N3K9 4069 aa9.32□□□□□ -0.92
SLC3A2-220ENST00000542922 ANK2Q01484 3957 aa9.32□□□□□ -0.92
SLC3A2-220ENST00000542922 RPL28P46779 137 aaKnown RBP9.32□□□□□ -0.92
SLC3A2-220ENST00000542922 C9orf116Q5BN46 136 aaPredicted RBP9.32□□□□□ -0.92
SLC3A2-220ENST00000542922 SCGB1A1P11684 91 aa9.31□□□□□ -0.92
SLC3A2-220ENST00000542922 Q9HAA7 133 aa9.31□□□□□ -0.92
SLC3A2-220ENST00000542922 CKS1BP61024 79 aa9.31□□□□□ -0.92
SLC3A2-220ENST00000542922 PRR3P79522 188 aaKnown RBP9.31□□□□□ -0.92
SLC3A2-220ENST00000542922 LELP1Q5T871 98 aa9.31□□□□□ -0.92
SLC3A2-220ENST00000542922 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
SLC3A2-220ENST00000542922 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
SLC3A2-220ENST00000542922 A0A087WYN8 130 aa9.3□□□□□ -0.92
SLC3A2-220ENST00000542922 MALP21145 153 aa9.3□□□□□ -0.92
SLC3A2-220ENST00000542922 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
SLC3A2-220ENST00000542922 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
SLC3A2-220ENST00000542922 LINC01561Q8N1V8 128 aa9.29□□□□□ -0.92
SLC3A2-220ENST00000542922 TRACP01848 142 aa9.29□□□□□ -0.92
SLC3A2-220ENST00000542922 OR13C6PQ8NH95 151 aa9.29□□□□□ -0.92
SLC3A2-220ENST00000542922 C10orf25Q5T742 122 aa9.28□□□□□ -0.92
SLC3A2-220ENST00000542922 CFAP161Q6P656 301 aa9.28□□□□□ -0.92
SLC3A2-220ENST00000542922 Q8NDZ9 215 aa9.28□□□□□ -0.92
SLC3A2-220ENST00000542922 MAST4O15021 2626 aa9.28□□□□□ -0.92
SLC3A2-220ENST00000542922 BAALC-AS2P0C853 105 aa9.27□□□□□ -0.92
SLC3A2-220ENST00000542922 LYPD5Q6UWN5 251 aa9.27□□□□□ -0.92
SLC3A2-220ENST00000542922 DEFB121Q5J5C9 76 aa9.27□□□□□ -0.93
SLC3A2-220ENST00000542922 ENHOQ6UWT2 76 aa9.27□□□□□ -0.93
SLC3A2-220ENST00000542922 Q6ZTC4 211 aa9.26□□□□□ -0.93
SLC3A2-220ENST00000542922 UNQ6190/PRO20217Q6UXQ8 127 aa9.26□□□□□ -0.93
SLC3A2-220ENST00000542922 WFDC10BQ8IUB3 73 aa9.25□□□□□ -0.93
SLC3A2-220ENST00000542922 PRR34Q9NV39 138 aa9.25□□□□□ -0.93
SLC3A2-220ENST00000542922 NANOS2P60321 138 aaKnown RBP9.24□□□□□ -0.93
SLC3A2-220ENST00000542922 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
SLC3A2-220ENST00000542922 NOTCH1P46531 2555 aa9.24□□□□□ -0.93
SLC3A2-220ENST00000542922 C9orf129Q5T035 196 aaKnown RBP9.24□□□□□ -0.93
SLC3A2-220ENST00000542922 KPRPQ5T749 579 aaPredicted RBP9.24□□□□□ -0.93
SLC3A2-220ENST00000542922 TTC32Q5I0X7 151 aa9.23□□□□□ -0.93
SLC3A2-220ENST00000542922 CXCL5P42830 114 aa9.23□□□□□ -0.93
SLC3A2-220ENST00000542922 EGFEM1PQ0D2K5 195 aa9.23□□□□□ -0.93
SLC3A2-220ENST00000542922 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
SLC3A2-220ENST00000542922 LECT2O14960 151 aa9.22□□□□□ -0.93
SLC3A2-220ENST00000542922 C3orf56Q8N813 242 aa9.22□□□□□ -0.93
SLC3A2-220ENST00000542922 NCR3O14931 201 aa9.22□□□□□ -0.93
SLC3A2-220ENST00000542922 SLPIP03973 132 aa9.22□□□□□ -0.93
SLC3A2-220ENST00000542922 KLK5Q9Y337 293 aaPredicted RBP9.22□□□□□ -0.93
SLC3A2-220ENST00000542922 CYSRT1A8MQ03 144 aa9.21□□□□□ -0.94
SLC3A2-220ENST00000542922 DNAH3Q8TD57 4116 aa9.21□□□□□ -0.94
SLC3A2-220ENST00000542922 A0A0J9YWU9 116 aa9.2□□□□□ -0.94
SLC3A2-220ENST00000542922 COX17Q14061 63 aa9.2□□□□□ -0.94
SLC3A2-220ENST00000542922 SNCGO76070 127 aa9.2□□□□□ -0.94
SLC3A2-220ENST00000542922 H0YGX0 51 aa9.19□□□□□ -0.94
SLC3A2-220ENST00000542922 DNAL4O96015 105 aa9.19□□□□□ -0.94
SLC3A2-220ENST00000542922 FAM240AA0A1B0GVK7 77 aa9.19□□□□□ -0.94
SLC3A2-220ENST00000542922 PRB2P02812 416 aaPredicted RBP9.18□□□□□ -0.94
SLC3A2-220ENST00000542922 A0A1B0GV72 72 aa9.17□□□□□ -0.94
SLC3A2-220ENST00000542922 NDUFC2O95298 119 aa9.17□□□□□ -0.94
SLC3A2-220ENST00000542922 ESRGQ1W209 222 aa9.17□□□□□ -0.94
SLC3A2-220ENST00000542922 SMCR5Q8TEV8 140 aa9.17□□□□□ -0.94
SLC3A2-220ENST00000542922 HIGD2BQ4VC39 106 aa9.17□□□□□ -0.94
SLC3A2-220ENST00000542922 COL6A5A8TX70 2615 aa9.17□□□□□ -0.94
SLC3A2-220ENST00000542922 KRTAP26-1Q6PEX3 210 aa9.16□□□□□ -0.94
SLC3A2-220ENST00000542922 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
SLC3A2-220ENST00000542922 BAHCC1Q9P281 2608 aa9.16□□□□□ -0.94
SLC3A2-220ENST00000542922 H3BNG1 76 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms