RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 SFTA2Q6UW10 78 aa7.72□□□□□ -1.17
SRGAP1-205ENST00000542841 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
SRGAP1-205ENST00000542841 PCP2Q8IVA1 136 aa7.72□□□□□ -1.17
SRGAP1-205ENST00000542841 Q8N3U1 123 aa7.72□□□□□ -1.17
SRGAP1-205ENST00000542841 CHCHD10Q8WYQ3 142 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-205ENST00000542841 VPS13BQ7Z7G8 4022 aa7.72□□□□□ -1.17
SRGAP1-205ENST00000542841 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
SRGAP1-205ENST00000542841 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-205ENST00000542841 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
SRGAP1-205ENST00000542841 CLPSL2Q6UWE3 100 aa7.71□□□□□ -1.18
SRGAP1-205ENST00000542841 Q6ZRN7 208 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-205ENST00000542841 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-205ENST00000542841 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
SRGAP1-205ENST00000542841 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
SRGAP1-205ENST00000542841 APOMO95445 188 aa7.7□□□□□ -1.18
SRGAP1-205ENST00000542841 XCL1P47992 114 aa7.7□□□□□ -1.18
SRGAP1-205ENST00000542841 UBE2WQ96B02 151 aa7.7□□□□□ -1.18
SRGAP1-205ENST00000542841 UBR4Q5T4S7 5183 aa7.69□□□□□ -1.18
SRGAP1-205ENST00000542841 IBA57-AS1B1ANH7 110 aa7.69□□□□□ -1.18
SRGAP1-205ENST00000542841 COX7A2LO14548 114 aa7.69□□□□□ -1.18
SRGAP1-205ENST00000542841 KRTAP10-1P60331 282 aa7.69□□□□□ -1.18
SRGAP1-205ENST00000542841 RMI2Q96E14 147 aa7.69□□□□□ -1.18
SRGAP1-205ENST00000542841 NDUFA1O15239 70 aa7.68□□□□□ -1.18
SRGAP1-205ENST00000542841 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
SRGAP1-205ENST00000542841 FOXI1Q12951 378 aa7.68□□□□□ -1.18
SRGAP1-205ENST00000542841 C2orf91Q6ZV80 131 aa7.68□□□□□ -1.18
SRGAP1-205ENST00000542841 Q8IZM0 81 aa7.68□□□□□ -1.18
SRGAP1-205ENST00000542841 C1orf43Q9BWL3 253 aa7.68□□□□□ -1.18
SRGAP1-205ENST00000542841 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 IGHV3-64A0A075B6Q5 118 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 GAGE12HA6NDE8 117 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 CXCL5P42830 114 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 HERV-K104P63124 156 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 TAL2Q16559 108 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 C5orf38Q86SI9 138 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 COX7B2Q8TF08 81 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 TTTY13Q9BZ97 58 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 COX11Q9Y6N1 276 aa7.67□□□□□ -1.18
SRGAP1-205ENST00000542841 IGLV10-54A0A075B6I4 117 aa7.66□□□□□ -1.18
SRGAP1-205ENST00000542841 MALP21145 153 aa7.66□□□□□ -1.18
SRGAP1-205ENST00000542841 GCSHP23434 173 aa7.66□□□□□ -1.18
SRGAP1-205ENST00000542841 HSD52Q0P140 79 aa7.66□□□□□ -1.18
SRGAP1-205ENST00000542841 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
SRGAP1-205ENST00000542841 SPANXB1Q9NS25 103 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-205ENST00000542841 A0A087WTM6 91 aa7.65□□□□□ -1.18
SRGAP1-205ENST00000542841 LINC00587B1AMM8 73 aa7.65□□□□□ -1.18
SRGAP1-205ENST00000542841 M0R143 59 aa7.65□□□□□ -1.18
SRGAP1-205ENST00000542841 TIMM17BO60830 172 aa7.65□□□□□ -1.18
SRGAP1-205ENST00000542841 CTAG1AP78358 180 aa7.65□□□□□ -1.18
SRGAP1-205ENST00000542841 KRTAP26-1Q6PEX3 210 aa7.65□□□□□ -1.18
SRGAP1-205ENST00000542841 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
SRGAP1-205ENST00000542841 F8WDY8 70 aa7.64□□□□□ -1.19
SRGAP1-205ENST00000542841 PRSS2P07478 247 aa7.64□□□□□ -1.19
SRGAP1-205ENST00000542841 Q6ZVH6 145 aa7.64□□□□□ -1.19
SRGAP1-205ENST00000542841 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-205ENST00000542841 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 HAMPP81172 84 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 CIRBPQ14011 172 aaKnown RBP7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 SERTAD4-AS1Q5TG53 156 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 CFAP161Q6P656 301 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 ORAOV1Q8WV07 137 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 TM2D2Q9BX73 214 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 TP73-AS1Q9UF72 201 aa7.63□□□□□ -1.19
SRGAP1-205ENST00000542841 KRTAP29-1A8MX34 341 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-205ENST00000542841 LBHQ53QV2 105 aaPredicted RBP7.62□□□□□ -1.19
SRGAP1-205ENST00000542841 C6orf226Q5I0X4 101 aa7.62□□□□□ -1.19
SRGAP1-205ENST00000542841 TOMM7Q9P0U1 55 aa7.62□□□□□ -1.19
SRGAP1-205ENST00000542841 KIAA0087Q14695 138 aa7.61□□□□□ -1.19
SRGAP1-205ENST00000542841 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
SRGAP1-205ENST00000542841 SPANXDQ9BXN6 97 aa7.61□□□□□ -1.19
SRGAP1-205ENST00000542841 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
SRGAP1-205ENST00000542841 SPANXCQ9NY87 97 aa7.61□□□□□ -1.19
SRGAP1-205ENST00000542841 CKS1BP61024 79 aa7.6□□□□□ -1.19
SRGAP1-205ENST00000542841 SPAG11BQ08648 103 aa7.6□□□□□ -1.19
SRGAP1-205ENST00000542841 C2orf48Q96LS8 159 aa7.6□□□□□ -1.19
SRGAP1-205ENST00000542841 HIST1H4GQ99525 98 aa7.6□□□□□ -1.19
SRGAP1-205ENST00000542841 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
SRGAP1-205ENST00000542841 IFITM1P13164 125 aa7.59□□□□□ -1.19
SRGAP1-205ENST00000542841 SRSF9Q13242 221 aaKnown RBP eCLIP7.59□□□□□ -1.19
SRGAP1-205ENST00000542841 BVES-AS1Q5T3Y7 98 aa7.59□□□□□ -1.19
SRGAP1-205ENST00000542841 CEND1Q8N111 149 aa7.59□□□□□ -1.19
SRGAP1-205ENST00000542841 Q9HAA7 133 aa7.59□□□□□ -1.19
SRGAP1-205ENST00000542841 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 GVQW2A0A096LPI5 108 aaPredicted RBP7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 IGLV5-52A0A0A0MRZ9 124 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 A6NJY4 79 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 PTTG1IPP53801 180 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 COX17Q14061 63 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 MEIG1Q5JSS6 88 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 LITAFQ99732 161 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
SRGAP1-205ENST00000542841 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
SRGAP1-205ENST00000542841 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
SRGAP1-205ENST00000542841 C15orf56Q8N910 161 aa7.57□□□□□ -1.2
SRGAP1-205ENST00000542841 NTN5Q8WTR8 489 aaPredicted RBP7.57□□□□□ -1.2
SRGAP1-205ENST00000542841 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
SRGAP1-205ENST00000542841 A6NDN8 102 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms