RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 TEX49A0A1B0GTD5 131 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 INAFM1C9JVW0 142 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 MT-ATP8P03928 68 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 SS18Q15532 418 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 TOMM7Q9P0U1 55 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 FAM240AA0A1B0GVK7 77 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 PAX4O43316 350 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 CRPP02741 224 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 RPL28P46779 137 aaKnown RBP4.54□□□□□ -1.68
PTPRO-208ENST00000542557 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 GAGE2AQ6NT46 116 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 SPATA3Q8NHX4 192 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
PTPRO-208ENST00000542557 OTOGQ6ZRI0 2925 aa4.53□□□□□ -1.68
PTPRO-208ENST00000542557 TRAV8-4A0A0B4J246 113 aa4.53□□□□□ -1.68
PTPRO-208ENST00000542557 Q8IZM0 81 aa4.53□□□□□ -1.68
PTPRO-208ENST00000542557 SND1-IT1Q9HBX3 110 aa4.53□□□□□ -1.68
PTPRO-208ENST00000542557 NSD1Q96L73 2696 aaPredicted RBP4.53□□□□□ -1.68
PTPRO-208ENST00000542557 DEFB135Q30KP9 77 aa4.53□□□□□ -1.68
PTPRO-208ENST00000542557 C5orf38Q86SI9 138 aa4.53□□□□□ -1.68
PTPRO-208ENST00000542557 GCN1Q92616 2671 aaKnown RBP4.53□□□□□ -1.69
PTPRO-208ENST00000542557 IGKV2-28A0A075B6P5 120 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 IGHV4-28A0A0C4DH34 117 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 IGKV2D-28P01615 120 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 MIFP14174 115 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 LINC00158P58513 81 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 CCL18P55774 89 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 LINC00337Q8N6G1 96 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 XCL1P47992 114 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 Q8NAQ8 132 aa4.52□□□□□ -1.69
PTPRO-208ENST00000542557 ATP5G1P05496 136 aa4.51□□□□□ -1.69
PTPRO-208ENST00000542557 DAD1P61803 113 aa4.51□□□□□ -1.69
PTPRO-208ENST00000542557 WFDC9Q8NEX5 89 aa4.51□□□□□ -1.69
PTPRO-208ENST00000542557 VWFP04275 2813 aa4.51□□□□□ -1.69
PTPRO-208ENST00000542557 CXCL5P42830 114 aa4.51□□□□□ -1.69
PTPRO-208ENST00000542557 HECTD1Q9ULT8 2610 aa4.5□□□□□ -1.69
PTPRO-208ENST00000542557 FAM218AQ96MZ4 157 aa4.5□□□□□ -1.69
PTPRO-208ENST00000542557 A0A096LPF7 62 aa4.5□□□□□ -1.69
PTPRO-208ENST00000542557 H0YGX0 51 aa4.5□□□□□ -1.69
PTPRO-208ENST00000542557 Q6Q795 121 aa4.5□□□□□ -1.69
PTPRO-208ENST00000542557 FN1P02751 2386 aaKnown RBP4.5□□□□□ -1.69
PTPRO-208ENST00000542557 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 SNCGO76070 127 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 ACYP1P07311 99 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 SPART-AS1P0CW21 52 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 PFN2P35080 140 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 COX17Q14061 63 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 KIAA0087Q14695 138 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 FAM19A1Q7Z5A9 133 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 LINC00269Q8N2A0 174 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 SMIM11BQ8TCY0 68 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 DEFB4AO15263 64 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 CKS1BP61024 79 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 CLPSL2Q6UWE3 100 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 CHCHD10Q8WYQ3 142 aaPredicted RBP4.49□□□□□ -1.69
PTPRO-208ENST00000542557 NOTCH2Q04721 2471 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 B5MCH6 92 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 BAALC-AS2P0C853 105 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 REG3AQ06141 175 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 LELP1Q5T871 98 aa4.49□□□□□ -1.69
PTPRO-208ENST00000542557 IGHV4-30-4P0DP06 118 aa4.48□□□□□ -1.69
PTPRO-208ENST00000542557 C15orf53Q8NAA6 179 aa4.48□□□□□ -1.69
PTPRO-208ENST00000542557 C22orf24Q9Y442 160 aa4.48□□□□□ -1.69
PTPRO-208ENST00000542557 TENM1Q9UKZ4 2725 aa4.48□□□□□ -1.69
PTPRO-208ENST00000542557 NDUFC2O95298 119 aa4.48□□□□□ -1.69
PTPRO-208ENST00000542557 ANGP03950 147 aaKnown RBP4.48□□□□□ -1.69
PTPRO-208ENST00000542557 FAM19A5Q7Z5A7 132 aaPredicted RBP4.48□□□□□ -1.69
PTPRO-208ENST00000542557 MUC7Q8TAX7 377 aa4.48□□□□□ -1.69
PTPRO-208ENST00000542557 C11orf68Q9H3H3 251 aaKnown RBP4.48□□□□□ -1.69
PTPRO-208ENST00000542557 INAFM2P0DMQ5 153 aa4.47□□□□□ -1.69
PTPRO-208ENST00000542557 DNAL4O96015 105 aa4.47□□□□□ -1.69
PTPRO-208ENST00000542557 SMIM20Q8N5G0 67 aa4.47□□□□□ -1.69
PTPRO-208ENST00000542557 NBEAL2Q6ZNJ1 2754 aa4.47□□□□□ -1.69
PTPRO-208ENST00000542557 A0A087WYN8 130 aa4.46□□□□□ -1.69
PTPRO-208ENST00000542557 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.69
PTPRO-208ENST00000542557 PRR34Q9NV39 138 aa4.46□□□□□ -1.69
PTPRO-208ENST00000542557 KLK5Q9Y337 293 aaPredicted RBP4.46□□□□□ -1.69
PTPRO-208ENST00000542557 H3BS24 57 aa4.46□□□□□ -1.7
PTPRO-208ENST00000542557 Q8N3U1 123 aa4.46□□□□□ -1.7
PTPRO-208ENST00000542557 TRBV7-7A0A0K0K1E9 115 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 A0A1B0GX51 115 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 PRYO14603 147 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 OXTP01178 125 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 SDIM1Q6ZPB5 146 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 OR13C6PQ8NH95 151 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 Q9HAA7 133 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 HIVEP1P15822 2718 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 TEP1Q99973 2627 aaKnown RBP4.45□□□□□ -1.7
PTPRO-208ENST00000542557 IGLV10-54A0A075B6I4 117 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 H3BNG1 76 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 RETNQ9HD89 108 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 TTC32Q5I0X7 151 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 OBSCN-AS1Q96MR7 158 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 PRO0628Q9UI54 55 aa4.45□□□□□ -1.7
PTPRO-208ENST00000542557 A0A0J9YWU9 116 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 LCE2BO14633 110 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 HTN3P15516 51 aa4.44□□□□□ -1.7
PTPRO-208ENST00000542557 NANOS2P60321 138 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms