RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 NACAE9PAV3 2078 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 RBMY1BA6NDE4 496 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 RBMY1EA6NEQ0 496 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 A8MTW9 85 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 NXPH4O95158 308 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 RBMY1DP0C7P1 496 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 BAALC-AS2P0C853 105 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 RBMY1A1P0DJD3 496 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 RBMY1CP0DJD4 496 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 LINC00315P59091 139 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 RBMY1FQ15415 496 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 MIAQ16674 131 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 MED14OSP0DP75 135 aa5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 ZNF625Q96I27 306 aaPredicted RBP5.72□□□□□ -1.49
PDLIM5-221ENST00000542407 HECTD1Q9ULT8 2610 aa5.71□□□□□ -1.49
PDLIM5-221ENST00000542407 ACANP16112 2415 aa5.71□□□□□ -1.5
PDLIM5-221ENST00000542407 MUC4Q99102 2169 aa5.71□□□□□ -1.5
PDLIM5-221ENST00000542407 IGLV4-3A0A075B6K6 122 aa5.71□□□□□ -1.5
PDLIM5-221ENST00000542407 DEFB114Q30KQ6 69 aa5.71□□□□□ -1.5
PDLIM5-221ENST00000542407 KIF25-AS1Q9Y6Z4 181 aa5.71□□□□□ -1.5
PDLIM5-221ENST00000542407 A0A087WVE0 104 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 TRBV27A0A0K0K1C4 114 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 Q9H8V8 135 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 NF1P21359 2839 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 SOSTDC1Q6X4U4 206 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 Q9HAA7 133 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 PROK1P58294 105 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 C20orf203Q8NBC4 194 aa5.7□□□□□ -1.5
PDLIM5-221ENST00000542407 TMEM256-PLSCR3K7ERE1 68 aa5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 ZNF73O43830 326 aaPredicted RBP5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 MYO9AB2RTY4 2548 aa5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 IGHV3-73A0A0B4J1V6 119 aa5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 IGKV3-20P01619 116 aa5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 KRTAP10-3P60369 221 aa5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 FAM222AQ5U5X8 452 aa5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 MAP6D1Q9H9H5 199 aa5.69□□□□□ -1.5
PDLIM5-221ENST00000542407 COX7A2LO14548 114 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 DEFB131AP59861 70 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 SPINK13Q1W4C9 94 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 IGHV3-16A0A0C4DH30 117 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 LYRM9A8MSI8 78 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 NDUFS5O43920 106 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 DNAL4O96015 105 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 LINC00588Q9Y4M8 146 aa5.68□□□□□ -1.5
PDLIM5-221ENST00000542407 DYNLRB2Q8TF09 96 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 VSIG2Q96IQ7 327 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 INAFM1C9JVW0 142 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 M0QY20 66 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 ODF3L2Q3SX64 289 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 FAM229BQ4G0N7 80 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 IBA57-AS1B1ANH7 110 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 FAM19A3Q7Z5A8 133 aa5.67□□□□□ -1.5
PDLIM5-221ENST00000542407 IGHV1OR15-1A0A075B7D0 117 aa5.66□□□□□ -1.5
PDLIM5-221ENST00000542407 HTN1P15515 57 aa5.66□□□□□ -1.5
PDLIM5-221ENST00000542407 C14orf132Q9NPU4 83 aa5.66□□□□□ -1.5
PDLIM5-221ENST00000542407 Q6JHZ5 121 aa5.66□□□□□ -1.5
PDLIM5-221ENST00000542407 FAM218AQ96MZ4 157 aa5.66□□□□□ -1.5
PDLIM5-221ENST00000542407 TRBV6-5A0A0K0K1A5 114 aa5.65□□□□□ -1.5
PDLIM5-221ENST00000542407 A8MUN3 132 aa5.65□□□□□ -1.5
PDLIM5-221ENST00000542407 UBE2L6O14933 153 aa5.65□□□□□ -1.5
PDLIM5-221ENST00000542407 LINC00308Q8TCZ7 52 aa5.65□□□□□ -1.5
PDLIM5-221ENST00000542407 OVOL2Q9BRP0 275 aa5.65□□□□□ -1.5
PDLIM5-221ENST00000542407 MTORP42345 2549 aa5.65□□□□□ -1.5
PDLIM5-221ENST00000542407 KLKP1Q107X0 134 aa5.65□□□□□ -1.51
PDLIM5-221ENST00000542407 BAHCC1Q9P281 2608 aa5.65□□□□□ -1.51
PDLIM5-221ENST00000542407 F8WEM9 126 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 Q6ZVQ6 151 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 UBE2D4Q9Y2X8 147 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 IGKV2-29A2NJV5 120 aaPredicted RBP5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 CDKN2A-AS1Q9UH64 79 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 TRAV13-2A0A0B4J235 113 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 PRYO14603 147 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 IGLV1-51P01701 117 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 LINC00467Q9BRT7 94 aa5.64□□□□□ -1.51
PDLIM5-221ENST00000542407 A0A087WZ39 114 aa5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 LINC00846Q9NV44 126 aa5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 NSD1Q96L73 2696 aaPredicted RBP5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 SETXQ7Z333 2677 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 C9orf129Q5T035 196 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 WFDC9Q8NEX5 89 aa5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 C19orf73Q9NVV2 129 aa5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 HIVEP2P31629 2446 aa5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 SORL1Q92673 2214 aa5.63□□□□□ -1.51
PDLIM5-221ENST00000542407 IGHV3-38A0A0C4DH36 116 aa5.62□□□□□ -1.51
PDLIM5-221ENST00000542407 PRM2P04554 102 aa5.62□□□□□ -1.51
PDLIM5-221ENST00000542407 KRTAP21-3Q3LHN1 58 aa5.62□□□□□ -1.51
PDLIM5-221ENST00000542407 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-221ENST00000542407 C11orf72Q8NBR9 251 aa5.62□□□□□ -1.51
PDLIM5-221ENST00000542407 HIVEP1P15822 2718 aa5.62□□□□□ -1.51
PDLIM5-221ENST00000542407 NIPBLQ6KC79 2804 aaeCLIP5.62□□□□□ -1.51
PDLIM5-221ENST00000542407 TRAV23DV6A0A075B6W5 121 aa5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 NDUFC1O43677 76 aa5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 ESRGQ1W209 222 aa5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 PIK3CD-AS1Q5SR53 167 aa5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 FAM104AQ969W3 186 aa5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 LCA10Q71F78 164 aa5.61□□□□□ -1.51
PDLIM5-221ENST00000542407 FN1P02751 2386 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 3727.3 ms