RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FUSP35637 526 aaKnown RBP eCLIP3.58□□□□□ -1.84
DDB1-219ENST00000541513 KRTDAPP60985 99 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 BLCAPP62952 87 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 MIAQ16674 131 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 CFAP126Q5VTH2 177 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 SDIM1Q6ZPB5 146 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 Q8N8P6 123 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 MUC7Q8TAX7 377 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 LINC01600Q96MT4 127 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 SCGB3A1Q96QR1 104 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 TRGV9Q99603 122 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 TTTY13Q9BZ97 58 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 CLPSL1A2RUU4 121 aa3.57□□□□□ -1.84
DDB1-219ENST00000541513 CRYM-AS1A6NIL9 109 aa3.57□□□□□ -1.84
DDB1-219ENST00000541513 A8MUU9 505 aa3.57□□□□□ -1.84
DDB1-219ENST00000541513 SAA1P0DJI8 122 aaPredicted RBP3.57□□□□□ -1.84
DDB1-219ENST00000541513 CIRBPQ14011 172 aaKnown RBP3.57□□□□□ -1.84
DDB1-219ENST00000541513 ATP11AUNQ6ZP68 121 aa3.57□□□□□ -1.84
DDB1-219ENST00000541513 LYZL2Q7Z4W2 148 aa3.57□□□□□ -1.84
DDB1-219ENST00000541513 PKD1L1Q8TDX9 2849 aa3.57□□□□□ -1.84
DDB1-219ENST00000541513 U3KQK5 164 aa3.57□□□□□ -1.84
DDB1-219ENST00000541513 IGKV1OR2-108A0A075B7D4 117 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 A0A096LNJ9 63 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 PIGBOS1A0A0B4J2F0 54 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 C19orf71A6NCJ1 209 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 IBA57-AS1B1ANH7 110 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 MDKP21741 143 aaPredicted RBP3.56□□□□□ -1.84
DDB1-219ENST00000541513 SUPT4H1P63272 117 aaKnown RBP3.56□□□□□ -1.84
DDB1-219ENST00000541513 NDPQ00604 133 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 PLGLAQ15195 96 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 MRGPRG-AS1Q2M3A8 158 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 TMEM167AQ8TBQ9 72 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 SCRT1Q9BWW7 348 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 NXT2Q9NPJ8 142 aaKnown RBP3.56□□□□□ -1.84
DDB1-219ENST00000541513 ICOSQ9Y6W8 199 aa3.56□□□□□ -1.84
DDB1-219ENST00000541513 CMYA5Q8N3K9 4069 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 IGHV3-73A0A0B4J1V6 119 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 CCKP06307 115 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 ACYP1P07311 99 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 ASB16-AS1Q495Z4 193 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 PSMG4Q5JS54 123 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 PATE2Q6UY27 113 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 ODF3Q96PU9 254 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 MGAM2Q2M2H8 2515 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 TRRAPQ9Y4A5 3859 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
DDB1-219ENST00000541513 NBEAL1Q6ZS30 2694 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 TRAV3A0A0B4J244 114 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 A6NN06 94 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 COX8AP10176 69 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 CKS2P33552 79 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 UBE2G1P62253 170 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 FXYD3Q14802 87 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 KLK9Q2XQG4 91 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 MANBALQ9NQG1 85 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 TMEM14BQ9NUH8 114 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 KLK9Q9UKQ9 250 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 SORL1Q92673 2214 aa3.54□□□□□ -1.84
DDB1-219ENST00000541513 IGKV1D-37A0A075B6S9 117 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 TRAV14DV4A0A0A6YYC5 116 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 F2Z2F3 143 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 G3V318 75 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 H3BUA1 57 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 NDUFC1O43677 76 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 XCL1P47992 114 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 C10orf55Q5SWW7 151 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 Q8N9P0 234 aaPredicted RBP3.53□□□□□ -1.84
DDB1-219ENST00000541513 Q8NDZ9 215 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 NDUFA4L2Q9NRX3 87 aa3.53□□□□□ -1.84
DDB1-219ENST00000541513 NOTCH1P46531 2555 aa3.53□□□□□ -1.85
DDB1-219ENST00000541513 E7EUB6 86 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 C3orf79P0CE67 100 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 PRCDQ00LT1 54 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 DEFB116Q30KQ4 102 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 RPL7L1Q6DKI1 246 aaKnown RBP3.52□□□□□ -1.85
DDB1-219ENST00000541513 C10orf99Q6UWK7 81 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 C2orf91Q6ZV80 131 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 NDUFA11Q86Y39 141 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 CLEC2BQ92478 149 aa3.52□□□□□ -1.85
DDB1-219ENST00000541513 FAM103A1Q9BTL3 118 aaKnown RBP3.52□□□□□ -1.85
DDB1-219ENST00000541513 TCRBV4S1A1TA0A5B7 111 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 WT1-ASQ06250 92 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 Q1T7F1 81 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 TMEM170BQ5T4T1 132 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 LINC00643Q86TS7 51 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 FAM223AQ8IWN6 122 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 USMG5Q96IX5 58 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 MRPL35Q9NZE8 188 aaKnown RBP3.51□□□□□ -1.85
DDB1-219ENST00000541513 HIGD1BQ9P298 99 aa3.51□□□□□ -1.85
DDB1-219ENST00000541513 A0A0B4J2C4 111 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 CEBPZOSA8MTT3 80 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 H3BQ85 93 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 BCE1O60756 84 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 IGHV3-53P01767 116 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 APELAP0DMC3 54 aa3.5□□□□□ -1.85
DDB1-219ENST00000541513 RNASE2P10153 161 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms