RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 X6R8D5 127 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 DNAH7Q8WXX0 4024 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 IGKV3OR2-268A0A0C4DH90 116 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 C5orf38Q86SI9 138 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 SPATA3Q8NHX4 192 aa6.59□□□□□ -1.35
CNOT4-212ENST00000541284 CRPP02741 224 aa6.58□□□□□ -1.36
CNOT4-212ENST00000541284 MALP21145 153 aa6.58□□□□□ -1.36
CNOT4-212ENST00000541284 SS18Q15532 418 aa6.58□□□□□ -1.36
CNOT4-212ENST00000541284 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
CNOT4-212ENST00000541284 NANOS2P60321 138 aaKnown RBP6.58□□□□□ -1.36
CNOT4-212ENST00000541284 WIPF1O43516 503 aa6.58□□□□□ -1.36
CNOT4-212ENST00000541284 CHCHD5Q9BSY4 110 aa6.58□□□□□ -1.36
CNOT4-212ENST00000541284 ACANP16112 2415 aa6.58□□□□□ -1.36
CNOT4-212ENST00000541284 HUWE1Q7Z6Z7 4374 aaKnown RBP6.57□□□□□ -1.36
CNOT4-212ENST00000541284 LYSTQ99698 3801 aa6.57□□□□□ -1.36
CNOT4-212ENST00000541284 LINC00158P58513 81 aa6.57□□□□□ -1.36
CNOT4-212ENST00000541284 IMUPQ9GZP8 106 aa6.57□□□□□ -1.36
CNOT4-212ENST00000541284 A0A1B0GUV1 79 aa6.56□□□□□ -1.36
CNOT4-212ENST00000541284 KIAA0087Q14695 138 aa6.56□□□□□ -1.36
CNOT4-212ENST00000541284 LINC00643Q86TS7 51 aa6.56□□□□□ -1.36
CNOT4-212ENST00000541284 NBEAL2Q6ZNJ1 2754 aa6.56□□□□□ -1.36
CNOT4-212ENST00000541284 MTORP42345 2549 aa6.56□□□□□ -1.36
CNOT4-212ENST00000541284 LINC00482Q8N8I6 264 aa6.56□□□□□ -1.36
CNOT4-212ENST00000541284 Q8NDZ9 215 aa6.56□□□□□ -1.36
CNOT4-212ENST00000541284 PFN2P35080 140 aa6.55□□□□□ -1.36
CNOT4-212ENST00000541284 DEFB130BP0DP73 79 aa6.55□□□□□ -1.36
CNOT4-212ENST00000541284 DEFB130AP0DP74 79 aa6.55□□□□□ -1.36
CNOT4-212ENST00000541284 GYPEP15421 78 aa6.55□□□□□ -1.36
CNOT4-212ENST00000541284 Q8N3U1 123 aa6.55□□□□□ -1.36
CNOT4-212ENST00000541284 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
CNOT4-212ENST00000541284 ATP5G1P05496 136 aa6.54□□□□□ -1.36
CNOT4-212ENST00000541284 Q8IZM0 81 aa6.54□□□□□ -1.36
CNOT4-212ENST00000541284 FAM236AA0A1B0GUQ0 79 aa6.54□□□□□ -1.36
CNOT4-212ENST00000541284 FAM236BA0A1B0GV22 79 aa6.54□□□□□ -1.36
CNOT4-212ENST00000541284 HIST1H4AP62805 103 aaKnown RBP6.54□□□□□ -1.36
CNOT4-212ENST00000541284 LINC01561Q8N1V8 128 aa6.54□□□□□ -1.36
CNOT4-212ENST00000541284 XCL1P47992 114 aa6.53□□□□□ -1.36
CNOT4-212ENST00000541284 PRKDCP78527 4128 aaKnown RBP6.53□□□□□ -1.36
CNOT4-212ENST00000541284 CSMD3Q7Z407 3707 aa6.53□□□□□ -1.36
CNOT4-212ENST00000541284 H0YGX0 51 aa6.53□□□□□ -1.36
CNOT4-212ENST00000541284 C11orf68Q9H3H3 251 aaKnown RBP6.53□□□□□ -1.36
CNOT4-212ENST00000541284 LECT2O14960 151 aa6.52□□□□□ -1.37
CNOT4-212ENST00000541284 INAFM2P0DMQ5 153 aa6.52□□□□□ -1.37
CNOT4-212ENST00000541284 KLK5Q9Y337 293 aaPredicted RBP6.52□□□□□ -1.37
CNOT4-212ENST00000541284 FBN1P35555 2871 aaKnown RBP6.52□□□□□ -1.37
CNOT4-212ENST00000541284 PRR3P79522 188 aaKnown RBP6.52□□□□□ -1.37
CNOT4-212ENST00000541284 CLPSL2Q6UWE3 100 aa6.52□□□□□ -1.37
CNOT4-212ENST00000541284 HIVEP1P15822 2718 aa6.52□□□□□ -1.37
CNOT4-212ENST00000541284 SLPIP03973 132 aa6.52□□□□□ -1.37
CNOT4-212ENST00000541284 CXCL5P42830 114 aa6.52□□□□□ -1.37
CNOT4-212ENST00000541284 C14orf132Q9NPU4 83 aa6.52□□□□□ -1.37
CNOT4-212ENST00000541284 FN1P02751 2386 aaKnown RBP6.51□□□□□ -1.37
CNOT4-212ENST00000541284 GAGE2AQ6NT46 116 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 SMR3AQ99954 134 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 PRO0255Q9UI72 69 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 A0A096LPF7 62 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 PAX4O43316 350 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 C6orf226Q5I0X4 101 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 C2orf48Q96LS8 159 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 LINC00846Q9NV44 126 aa6.51□□□□□ -1.37
CNOT4-212ENST00000541284 IGHV4-28A0A0C4DH34 117 aa6.5□□□□□ -1.37
CNOT4-212ENST00000541284 NCR3O14931 201 aa6.5□□□□□ -1.37
CNOT4-212ENST00000541284 SMIM9A6NGZ8 99 aa6.49□□□□□ -1.37
CNOT4-212ENST00000541284 DNAH9Q9NYC9 4486 aa6.49□□□□□ -1.37
CNOT4-212ENST00000541284 LINC00269Q8N2A0 174 aa6.49□□□□□ -1.37
CNOT4-212ENST00000541284 NDUFC2O95298 119 aa6.48□□□□□ -1.37
CNOT4-212ENST00000541284 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
CNOT4-212ENST00000541284 CD164L2Q6UWJ8 174 aa6.48□□□□□ -1.37
CNOT4-212ENST00000541284 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
CNOT4-212ENST00000541284 CELA1Q9UNI1 258 aa6.48□□□□□ -1.37
CNOT4-212ENST00000541284 DNAL4O96015 105 aa6.47□□□□□ -1.37
CNOT4-212ENST00000541284 C3orf56Q8N813 242 aa6.47□□□□□ -1.37
CNOT4-212ENST00000541284 CHCHD10Q8WYQ3 142 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-212ENST00000541284 LYRM9A8MSI8 78 aa6.47□□□□□ -1.37
CNOT4-212ENST00000541284 DEFB4AO15263 64 aa6.47□□□□□ -1.37
CNOT4-212ENST00000541284 COX17Q14061 63 aa6.47□□□□□ -1.37
CNOT4-212ENST00000541284 Q8N814 137 aa6.47□□□□□ -1.37
CNOT4-212ENST00000541284 OR13C6PQ8NH95 151 aa6.47□□□□□ -1.37
CNOT4-212ENST00000541284 C10orf25Q5T742 122 aa6.46□□□□□ -1.37
CNOT4-212ENST00000541284 Q6JHZ5 121 aa6.46□□□□□ -1.37
CNOT4-212ENST00000541284 Q8NAQ8 132 aa6.46□□□□□ -1.37
CNOT4-212ENST00000541284 REG3AQ06141 175 aa6.46□□□□□ -1.38
CNOT4-212ENST00000541284 C3orf22Q8N5N4 141 aa6.46□□□□□ -1.38
CNOT4-212ENST00000541284 IGLV10-54A0A075B6I4 117 aa6.45□□□□□ -1.38
CNOT4-212ENST00000541284 A0A1B0GX51 115 aa6.45□□□□□ -1.38
CNOT4-212ENST00000541284 DEFB135Q30KP9 77 aa6.45□□□□□ -1.38
CNOT4-212ENST00000541284 C6orf223Q8N319 242 aa6.45□□□□□ -1.38
CNOT4-212ENST00000541284 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
CNOT4-212ENST00000541284 ORMDL1Q9P0S3 153 aa6.45□□□□□ -1.38
CNOT4-212ENST00000541284 CCKP06307 115 aa6.44□□□□□ -1.38
CNOT4-212ENST00000541284 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
CNOT4-212ENST00000541284 PKD1L1Q8TDX9 2849 aa6.44□□□□□ -1.38
CNOT4-212ENST00000541284 PRR34Q9NV39 138 aa6.43□□□□□ -1.38
CNOT4-212ENST00000541284 A0A087WVE0 104 aa6.43□□□□□ -1.38
CNOT4-212ENST00000541284 IGKV3D-7A0A0C4DH55 119 aa6.43□□□□□ -1.38
CNOT4-212ENST00000541284 UQCRQO14949 82 aa6.43□□□□□ -1.38
CNOT4-212ENST00000541284 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
CNOT4-212ENST00000541284 LYPD5Q6UWN5 251 aa6.43□□□□□ -1.38
CNOT4-212ENST00000541284 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
CNOT4-212ENST00000541284 BAHCC1Q9P281 2608 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms