RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 LINC00315P59091 139 aa10.64□□□□□ -0.71
SMARCA4-207ENST00000541122 LINC01006Q8NI28 216 aa10.64□□□□□ -0.71
SMARCA4-207ENST00000541122 PSPHP1O15172 72 aa10.64□□□□□ -0.71
SMARCA4-207ENST00000541122 CSPG4Q6UVK1 2322 aa10.63□□□□□ -0.71
SMARCA4-207ENST00000541122 SORL1Q92673 2214 aa10.63□□□□□ -0.71
SMARCA4-207ENST00000541122 IGLV5-45A0A087WSX0 123 aa10.63□□□□□ -0.71
SMARCA4-207ENST00000541122 AGRNO00468 2067 aa10.63□□□□□ -0.71
SMARCA4-207ENST00000541122 HIVEP2P31629 2446 aa10.62□□□□□ -0.71
SMARCA4-207ENST00000541122 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
SMARCA4-207ENST00000541122 LINC00474Q9P2X8 69 aa10.61□□□□□ -0.71
SMARCA4-207ENST00000541122 LIMD2Q9BT23 127 aa10.61□□□□□ -0.71
SMARCA4-207ENST00000541122 C2orf48Q96LS8 159 aa10.61□□□□□ -0.71
SMARCA4-207ENST00000541122 PRRC2AP48634 2157 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-207ENST00000541122 HCG22E2RYF7 251 aa10.6□□□□□ -0.71
SMARCA4-207ENST00000541122 PLAC8L1A1L4L8 177 aa10.6□□□□□ -0.71
SMARCA4-207ENST00000541122 H0Y9P7 68 aa10.59□□□□□ -0.71
SMARCA4-207ENST00000541122 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
SMARCA4-207ENST00000541122 EXPH5Q8NEV8 1989 aa10.59□□□□□ -0.71
SMARCA4-207ENST00000541122 ADAMTS20P59510 1910 aa10.59□□□□□ -0.71
SMARCA4-207ENST00000541122 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
SMARCA4-207ENST00000541122 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.58□□□□□ -0.72
SMARCA4-207ENST00000541122 A0A1B0GW54 56 aa10.58□□□□□ -0.72
SMARCA4-207ENST00000541122 Q8N2B8 174 aa10.58□□□□□ -0.72
SMARCA4-207ENST00000541122 SPINK6Q6UWN8 80 aa10.58□□□□□ -0.72
SMARCA4-207ENST00000541122 NANOS2P60321 138 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-207ENST00000541122 RETNQ9HD89 108 aa10.57□□□□□ -0.72
SMARCA4-207ENST00000541122 C4orf26Q17RF5 130 aa10.57□□□□□ -0.72
SMARCA4-207ENST00000541122 AVPP01185 164 aa10.56□□□□□ -0.72
SMARCA4-207ENST00000541122 IGHV3OR16-9A0A0B4J2B5 98 aa10.55□□□□□ -0.72
SMARCA4-207ENST00000541122 C7orf33Q8WU49 177 aa10.55□□□□□ -0.72
SMARCA4-207ENST00000541122 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
SMARCA4-207ENST00000541122 TET2Q6N021 2002 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-207ENST00000541122 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
SMARCA4-207ENST00000541122 LOC110117498A0A087WWA1 95 aa10.53□□□□□ -0.72
SMARCA4-207ENST00000541122 FAM218AQ96MZ4 157 aa10.53□□□□□ -0.72
SMARCA4-207ENST00000541122 IGLV9-49A0A0B4J1Y8 123 aa10.53□□□□□ -0.72
SMARCA4-207ENST00000541122 TTC28Q96AY4 2481 aa10.52□□□□□ -0.73
SMARCA4-207ENST00000541122 A0A087WSZ3 146 aa10.51□□□□□ -0.73
SMARCA4-207ENST00000541122 C6orf223Q8N319 242 aa10.51□□□□□ -0.73
SMARCA4-207ENST00000541122 MUC6Q6W4X9 2439 aa10.51□□□□□ -0.73
SMARCA4-207ENST00000541122 Q9BRP9 147 aa10.5□□□□□ -0.73
SMARCA4-207ENST00000541122 ATRXP46100 2492 aa10.5□□□□□ -0.73
SMARCA4-207ENST00000541122 RAI1Q7Z5J4 1906 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-207ENST00000541122 Q6ZQT0 140 aa10.49□□□□□ -0.73
SMARCA4-207ENST00000541122 SMIM29Q86T20 159 aa10.49□□□□□ -0.73
SMARCA4-207ENST00000541122 CDSNQ15517 529 aa10.49□□□□□ -0.73
SMARCA4-207ENST00000541122 A8MTW9 85 aa10.48□□□□□ -0.73
SMARCA4-207ENST00000541122 IGHV4-30-4P0DP06 118 aa10.48□□□□□ -0.73
SMARCA4-207ENST00000541122 PCOTHQ58A44 107 aa10.48□□□□□ -0.73
SMARCA4-207ENST00000541122 UTRNP46939 3433 aa10.47□□□□□ -0.73
SMARCA4-207ENST00000541122 H3BPC8 53 aa10.47□□□□□ -0.73
SMARCA4-207ENST00000541122 C1orf64Q8NEQ6 169 aa10.47□□□□□ -0.73
SMARCA4-207ENST00000541122 PTPN13Q12923 2485 aa10.47□□□□□ -0.73
SMARCA4-207ENST00000541122 LITAFQ99732 161 aa10.46□□□□□ -0.74
SMARCA4-207ENST00000541122 BDP1A6H8Y1 2624 aa10.45□□□□□ -0.74
SMARCA4-207ENST00000541122 IGHV6-1A0A0B4J1U7 121 aa10.45□□□□□ -0.74
SMARCA4-207ENST00000541122 OTOGLQ3ZCN5 2332 aa10.44□□□□□ -0.74
SMARCA4-207ENST00000541122 INAFM1C9JVW0 142 aa10.44□□□□□ -0.74
SMARCA4-207ENST00000541122 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
SMARCA4-207ENST00000541122 CACNA1AO00555 2505 aa10.43□□□□□ -0.74
SMARCA4-207ENST00000541122 ERC2-IT1O76042 136 aa10.43□□□□□ -0.74
SMARCA4-207ENST00000541122 Q6ZRU5 148 aa10.43□□□□□ -0.74
SMARCA4-207ENST00000541122 LYPD5Q6UWN5 251 aa10.42□□□□□ -0.74
SMARCA4-207ENST00000541122 TP53AIP1Q9HCN2 124 aa10.42□□□□□ -0.74
SMARCA4-207ENST00000541122 KIAA0087Q14695 138 aa10.41□□□□□ -0.74
SMARCA4-207ENST00000541122 CUL9Q8IWT3 2517 aa10.41□□□□□ -0.74
SMARCA4-207ENST00000541122 ELOF1P60002 83 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-207ENST00000541122 NAV2Q8IVL1 2488 aa10.41□□□□□ -0.74
SMARCA4-207ENST00000541122 KLK9Q2XQG4 91 aa10.41□□□□□ -0.74
SMARCA4-207ENST00000541122 SMCR5Q8TEV8 140 aa10.41□□□□□ -0.74
SMARCA4-207ENST00000541122 NHLRC4P0CG21 123 aaPredicted RBP10.4□□□□□ -0.74
SMARCA4-207ENST00000541122 FHL3Q13643 280 aa10.4□□□□□ -0.75
SMARCA4-207ENST00000541122 A0A1W2PPR1 153 aa10.38□□□□□ -0.75
SMARCA4-207ENST00000541122 LY6G6DO95868 133 aa10.37□□□□□ -0.75
SMARCA4-207ENST00000541122 DEFB116Q30KQ4 102 aa10.37□□□□□ -0.75
SMARCA4-207ENST00000541122 TM2D3Q9BRN9 247 aa10.37□□□□□ -0.75
SMARCA4-207ENST00000541122 SONP18583 2426 aaKnown RBP10.36□□□□□ -0.75
SMARCA4-207ENST00000541122 Q8NBF4 154 aa10.35□□□□□ -0.75
SMARCA4-207ENST00000541122 Q6ZTC4 211 aa10.34□□□□□ -0.75
SMARCA4-207ENST00000541122 C22orf24Q9Y442 160 aa10.34□□□□□ -0.75
SMARCA4-207ENST00000541122 MYO9AB2RTY4 2548 aa10.33□□□□□ -0.75
SMARCA4-207ENST00000541122 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
SMARCA4-207ENST00000541122 NOTCH2Q04721 2471 aa10.32□□□□□ -0.76
SMARCA4-207ENST00000541122 KLKP1Q107X0 134 aa10.31□□□□□ -0.76
SMARCA4-207ENST00000541122 CIRBP-AS1Q8TBR5 109 aa10.3□□□□□ -0.76
SMARCA4-207ENST00000541122 Q9UF83 564 aa10.3□□□□□ -0.76
SMARCA4-207ENST00000541122 HIVEP3Q5T1R4 2406 aa10.3□□□□□ -0.76
SMARCA4-207ENST00000541122 A0A1B0GU69 56 aa10.29□□□□□ -0.76
SMARCA4-207ENST00000541122 ACYP2P14621 99 aa10.29□□□□□ -0.76
SMARCA4-207ENST00000541122 PTPRBP23467 1997 aa10.29□□□□□ -0.76
SMARCA4-207ENST00000541122 PRLHP81277 87 aa10.29□□□□□ -0.76
SMARCA4-207ENST00000541122 CYP4F30PQ9H0H9 118 aa10.28□□□□□ -0.76
SMARCA4-207ENST00000541122 LINC01556Q5JQF7 62 aa10.27□□□□□ -0.76
SMARCA4-207ENST00000541122 GVQW2A0A096LPI5 108 aaPredicted RBP10.27□□□□□ -0.77
SMARCA4-207ENST00000541122 PLA2G2AP14555 144 aa10.27□□□□□ -0.77
SMARCA4-207ENST00000541122 SPAG11AQ6PDA7 123 aa10.26□□□□□ -0.77
SMARCA4-207ENST00000541122 OXLD1Q5BKU9 147 aa10.26□□□□□ -0.77
SMARCA4-207ENST00000541122 Q6ZRX8 168 aa10.26□□□□□ -0.77
SMARCA4-207ENST00000541122 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
SMARCA4-207ENST00000541122 TRAV22A0A0B4J277 110 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms