RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 TMEM89A2RUT3 159 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 IGKV3-20P01619 116 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
CLDN2-202ENST00000540876 PROK1P58294 105 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 HAMPP81172 84 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 BRD3OSQ6XYD6 125 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 Q8N9W7 124 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 SND1-IT1Q9HBX3 110 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 A0A096LNT2 108 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 IGHV3-16A0A0C4DH30 117 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 NDUFC1O43677 76 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 MIFP14174 115 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 Q6ZTI0 123 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 APRG1Q8IVJ8 170 aa6.94□□□□□ -1.3
CLDN2-202ENST00000540876 PLAC8L1A1L4L8 177 aa6.93□□□□□ -1.3
CLDN2-202ENST00000540876 CD164Q04900 197 aa6.93□□□□□ -1.3
CLDN2-202ENST00000540876 LINC00467Q9BRT7 94 aa6.93□□□□□ -1.3
CLDN2-202ENST00000540876 IGKV2-28A0A075B6P5 120 aa6.93□□□□□ -1.3
CLDN2-202ENST00000540876 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
CLDN2-202ENST00000540876 IGKV2D-28P01615 120 aa6.93□□□□□ -1.3
CLDN2-202ENST00000540876 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
CLDN2-202ENST00000540876 LY6EQ16553 131 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 Q9UF83 564 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 KLLNB2CW77 178 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 BCE1O60756 84 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 MINOS1Q5TGZ0 78 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 TM2D3Q9BRN9 247 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 MINOS1-NBL1R4GNA1 71 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 F8P00451 2351 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 SORL1Q92673 2214 aa6.92□□□□□ -1.3
CLDN2-202ENST00000540876 ANK3Q12955 4377 aaKnown RBP6.91□□□□□ -1.3
CLDN2-202ENST00000540876 DAD1P61803 113 aa6.91□□□□□ -1.3
CLDN2-202ENST00000540876 CHCHD7Q9BUK0 85 aa6.91□□□□□ -1.3
CLDN2-202ENST00000540876 MSMBP08118 114 aa6.91□□□□□ -1.3
CLDN2-202ENST00000540876 IGLV5-45A0A087WSX0 123 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 JMJD7-PLA2G4BH0Y9G9 81 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 ESRGQ1W209 222 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 Q8N6K4 173 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 SETD2Q9BYW2 2564 aaPredicted RBP6.9□□□□□ -1.3
CLDN2-202ENST00000540876 IGHV4-31P0DP07 118 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 HTN1P15515 57 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 DSCR9P59020 149 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 Q6ZRU5 148 aa6.9□□□□□ -1.3
CLDN2-202ENST00000540876 JMJD1CQ15652 2540 aa6.9□□□□□ -1.31
CLDN2-202ENST00000540876 IGHV3-11P01762 117 aa6.9□□□□□ -1.31
CLDN2-202ENST00000540876 LINC00242Q5T6M2 205 aa6.9□□□□□ -1.31
CLDN2-202ENST00000540876 CR1P17927 2039 aa6.89□□□□□ -1.31
CLDN2-202ENST00000540876 B4DSR2 109 aa6.89□□□□□ -1.31
CLDN2-202ENST00000540876 IGHV4-38-2P0DP08 117 aa6.89□□□□□ -1.31
CLDN2-202ENST00000540876 HIVEP2P31629 2446 aa6.89□□□□□ -1.31
CLDN2-202ENST00000540876 LRCOL1A6NCL2 159 aa6.89□□□□□ -1.31
CLDN2-202ENST00000540876 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
CLDN2-202ENST00000540876 LINC00158P58513 81 aa6.89□□□□□ -1.31
CLDN2-202ENST00000540876 IGHV3OR16-12A0A075B7B8 117 aa6.88□□□□□ -1.31
CLDN2-202ENST00000540876 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
CLDN2-202ENST00000540876 MRPL55Q7Z7F7 128 aaKnown RBP6.88□□□□□ -1.31
CLDN2-202ENST00000540876 Q8N3U1 123 aa6.88□□□□□ -1.31
CLDN2-202ENST00000540876 LINC01356Q8N9X3 169 aa6.88□□□□□ -1.31
CLDN2-202ENST00000540876 C11orf68Q9H3H3 251 aaKnown RBP6.88□□□□□ -1.31
CLDN2-202ENST00000540876 TMEM254Q8TBM7 123 aa6.87□□□□□ -1.31
CLDN2-202ENST00000540876 FN1P02751 2386 aaKnown RBP6.87□□□□□ -1.31
CLDN2-202ENST00000540876 C1orf158Q8N1D5 194 aa6.87□□□□□ -1.31
CLDN2-202ENST00000540876 TOMM7Q9P0U1 55 aa6.87□□□□□ -1.31
CLDN2-202ENST00000540876 TRBV7-4A0A0J9YYF1 115 aa6.87□□□□□ -1.31
CLDN2-202ENST00000540876 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
CLDN2-202ENST00000540876 LAMTOR3Q9UHA4 124 aa6.87□□□□□ -1.31
CLDN2-202ENST00000540876 ZNF561-AS1K7EIQ3 104 aa6.86□□□□□ -1.31
CLDN2-202ENST00000540876 C6orf223Q8N319 242 aa6.86□□□□□ -1.31
CLDN2-202ENST00000540876 CCL18P55774 89 aa6.86□□□□□ -1.31
CLDN2-202ENST00000540876 NREPQ16612 68 aa6.86□□□□□ -1.31
CLDN2-202ENST00000540876 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
CLDN2-202ENST00000540876 SPINK13Q1W4C9 94 aa6.85□□□□□ -1.31
CLDN2-202ENST00000540876 C5orf56Q8N8D9 126 aa6.85□□□□□ -1.31
CLDN2-202ENST00000540876 NSD1Q96L73 2696 aaPredicted RBP6.85□□□□□ -1.31
CLDN2-202ENST00000540876 H3BUX3 64 aa6.85□□□□□ -1.31
CLDN2-202ENST00000540876 KRTAP1-1Q07627 177 aa6.85□□□□□ -1.31
CLDN2-202ENST00000540876 Q6ZSN1 163 aa6.85□□□□□ -1.31
CLDN2-202ENST00000540876 RHPN1-AS1Q9BWJ2 59 aa6.85□□□□□ -1.31
CLDN2-202ENST00000540876 TMEM256-PLSCR3K7ERE1 68 aa6.84□□□□□ -1.31
CLDN2-202ENST00000540876 PSPHP1O15172 72 aa6.84□□□□□ -1.31
CLDN2-202ENST00000540876 Q6ZVQ6 151 aa6.84□□□□□ -1.31
CLDN2-202ENST00000540876 M0R2N4 97 aa6.83□□□□□ -1.32
CLDN2-202ENST00000540876 TRBV10-1A0A0K0K1A3 114 aa6.83□□□□□ -1.32
CLDN2-202ENST00000540876 C19orf54Q5BKX5 351 aa6.83□□□□□ -1.32
CLDN2-202ENST00000540876 LY6G6DO95868 133 aa6.83□□□□□ -1.32
CLDN2-202ENST00000540876 DYNLRB2Q8TF09 96 aa6.83□□□□□ -1.32
CLDN2-202ENST00000540876 Q8N814 137 aa6.82□□□□□ -1.32
CLDN2-202ENST00000540876 PRYO14603 147 aa6.82□□□□□ -1.32
CLDN2-202ENST00000540876 K7EQG2 157 aa6.81□□□□□ -1.32
CLDN2-202ENST00000540876 NDUFA4O00483 81 aa6.81□□□□□ -1.32
CLDN2-202ENST00000540876 PRM2P04554 102 aa6.81□□□□□ -1.32
CLDN2-202ENST00000540876 DEFB112Q30KQ8 113 aa6.8□□□□□ -1.32
CLDN2-202ENST00000540876 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
CLDN2-202ENST00000540876 Q6ZQT0 140 aa6.8□□□□□ -1.32
CLDN2-202ENST00000540876 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
CLDN2-202ENST00000540876 BPY2O14599 106 aa6.8□□□□□ -1.32
CLDN2-202ENST00000540876 Q6ZTC4 211 aa6.8□□□□□ -1.32
CLDN2-202ENST00000540876 INAFM1C9JVW0 142 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms