RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 Q8IZM0 81 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 PACRGQ96M98 296 aaPredicted RBP11.85□□□□□ -0.51
RAB35-204ENST00000540803 TOMM7Q9P0U1 55 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 GAGE2DQ9UEU5 116 aa11.85□□□□□ -0.51
RAB35-204ENST00000540803 NDUFC2-KCTD14E9PQ53 114 aa11.83□□□□□ -0.52
RAB35-204ENST00000540803 C18orf32Q8TCD1 76 aa11.83□□□□□ -0.52
RAB35-204ENST00000540803 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
RAB35-204ENST00000540803 CST9LQ9H4G1 147 aa11.83□□□□□ -0.52
RAB35-204ENST00000540803 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
RAB35-204ENST00000540803 CKS1BP61024 79 aa11.82□□□□□ -0.52
RAB35-204ENST00000540803 C6orf226Q5I0X4 101 aa11.82□□□□□ -0.52
RAB35-204ENST00000540803 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
RAB35-204ENST00000540803 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
RAB35-204ENST00000540803 A0A096LNJ9 63 aa11.81□□□□□ -0.52
RAB35-204ENST00000540803 SRSF9Q13242 221 aaKnown RBP eCLIP11.81□□□□□ -0.52
RAB35-204ENST00000540803 PMVKQ15126 192 aa11.81□□□□□ -0.52
RAB35-204ENST00000540803 SPINK6Q6UWN8 80 aa11.81□□□□□ -0.52
RAB35-204ENST00000540803 KRTAP7-1Q8IUC3 87 aa11.81□□□□□ -0.52
RAB35-204ENST00000540803 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
RAB35-204ENST00000540803 SMIM1B2RUZ4 78 aa11.8□□□□□ -0.52
RAB35-204ENST00000540803 SERTAD4-AS1Q5TG53 156 aa11.8□□□□□ -0.52
RAB35-204ENST00000540803 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
RAB35-204ENST00000540803 LINC00614P0C842 121 aa11.79□□□□□ -0.52
RAB35-204ENST00000540803 C9orf129Q5T035 196 aaKnown RBP11.79□□□□□ -0.52
RAB35-204ENST00000540803 YPEL4Q96NS1 127 aa11.79□□□□□ -0.52
RAB35-204ENST00000540803 F8VRH5 84 aa11.77□□□□□ -0.53
RAB35-204ENST00000540803 PDZD11Q5EBL8 140 aa11.77□□□□□ -0.53
RAB35-204ENST00000540803 KRTAP11-1Q8IUC1 163 aa11.77□□□□□ -0.53
RAB35-204ENST00000540803 LINC01600Q96MT4 127 aa11.77□□□□□ -0.53
RAB35-204ENST00000540803 HBDP02042 147 aa11.76□□□□□ -0.53
RAB35-204ENST00000540803 PMCHL1Q16048 86 aa11.76□□□□□ -0.53
RAB35-204ENST00000540803 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
RAB35-204ENST00000540803 SPINK8P0C7L1 97 aa11.75□□□□□ -0.53
RAB35-204ENST00000540803 CXCL5P42830 114 aa11.75□□□□□ -0.53
RAB35-204ENST00000540803 M0QXV9 152 aa11.74□□□□□ -0.53
RAB35-204ENST00000540803 COX7B2Q8TF08 81 aa11.74□□□□□ -0.53
RAB35-204ENST00000540803 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
RAB35-204ENST00000540803 RAB5BP61020 215 aa11.73□□□□□ -0.53
RAB35-204ENST00000540803 REG3GQ6UW15 175 aa11.73□□□□□ -0.53
RAB35-204ENST00000540803 NDUFA6P56556 154 aa11.72□□□□□ -0.53
RAB35-204ENST00000540803 XAGE1AQ9HD64 81 aa11.71□□□□□ -0.53
RAB35-204ENST00000540803 H3BRM9 83 aa11.7□□□□□ -0.54
RAB35-204ENST00000540803 CBLN2Q8IUK8 224 aa11.7□□□□□ -0.54
RAB35-204ENST00000540803 ATP5LO75964 103 aa11.69□□□□□ -0.54
RAB35-204ENST00000540803 IGLV7-43P04211 117 aa11.69□□□□□ -0.54
RAB35-204ENST00000540803 ZNF22P17026 224 aaPredicted RBP11.69□□□□□ -0.54
RAB35-204ENST00000540803 UBE2BP63146 152 aa11.69□□□□□ -0.54
RAB35-204ENST00000540803 PLA2G2DQ9UNK4 145 aa11.68□□□□□ -0.54
RAB35-204ENST00000540803 IGLV5-39A0A0G2JS06 123 aa11.67□□□□□ -0.54
RAB35-204ENST00000540803 KRTAP10-8P60410 259 aa11.67□□□□□ -0.54
RAB35-204ENST00000540803 C22orf24Q9Y442 160 aa11.67□□□□□ -0.54
RAB35-204ENST00000540803 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
RAB35-204ENST00000540803 CHCHD1Q96BP2 118 aaKnown RBP11.66□□□□□ -0.54
RAB35-204ENST00000540803 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
RAB35-204ENST00000540803 SLC7A5P1Q8MH63 180 aa11.65□□□□□ -0.54
RAB35-204ENST00000540803 ODF1Q14990 250 aa11.63□□□□□ -0.55
RAB35-204ENST00000540803 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
RAB35-204ENST00000540803 TP73-AS1Q9UF72 201 aa11.62□□□□□ -0.55
RAB35-204ENST00000540803 H0Y9J4 135 aa11.61□□□□□ -0.55
RAB35-204ENST00000540803 LBHQ53QV2 105 aaPredicted RBP11.61□□□□□ -0.55
RAB35-204ENST00000540803 CHTOPQ9Y3Y2 248 aaKnown RBP11.61□□□□□ -0.55
RAB35-204ENST00000540803 TRGC2P03986 189 aa11.6□□□□□ -0.55
RAB35-204ENST00000540803 TMEM170BQ5T4T1 132 aa11.6□□□□□ -0.55
RAB35-204ENST00000540803 MRPL55Q7Z7F7 128 aaKnown RBP11.6□□□□□ -0.55
RAB35-204ENST00000540803 IFI27L1Q96BM0 104 aa11.6□□□□□ -0.55
RAB35-204ENST00000540803 TRAV12-1A0A0B4J245 112 aa11.59□□□□□ -0.55
RAB35-204ENST00000540803 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.56
RAB35-204ENST00000540803 NUPR1O60356 82 aa11.57□□□□□ -0.56
RAB35-204ENST00000540803 HSBP1O75506 76 aa11.57□□□□□ -0.56
RAB35-204ENST00000540803 PFN2P35080 140 aa11.57□□□□□ -0.56
RAB35-204ENST00000540803 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
RAB35-204ENST00000540803 IGLV5-37A0A075B6J1 123 aa11.56□□□□□ -0.56
RAB35-204ENST00000540803 LINC00167Q96N53 147 aa11.56□□□□□ -0.56
RAB35-204ENST00000540803 ERG28Q9UKR5 140 aa11.56□□□□□ -0.56
RAB35-204ENST00000540803 LINC00310P59036 64 aa11.55□□□□□ -0.56
RAB35-204ENST00000540803 TMEM223A0PJW6 202 aa11.54□□□□□ -0.56
RAB35-204ENST00000540803 ZNF861PO60384 105 aa11.54□□□□□ -0.56
RAB35-204ENST00000540803 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
RAB35-204ENST00000540803 ZNF625Q96I27 306 aaPredicted RBP11.54□□□□□ -0.56
RAB35-204ENST00000540803 RPL37AP8A6NKH3 93 aa11.53□□□□□ -0.56
RAB35-204ENST00000540803 COLCA2A8K830 154 aa11.53□□□□□ -0.56
RAB35-204ENST00000540803 COX17Q14061 63 aa11.53□□□□□ -0.56
RAB35-204ENST00000540803 SFTA2Q6UW10 78 aa11.53□□□□□ -0.56
RAB35-204ENST00000540803 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
RAB35-204ENST00000540803 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
RAB35-204ENST00000540803 GAGE10A6NGK3 116 aa11.52□□□□□ -0.57
RAB35-204ENST00000540803 SERF1AO75920 110 aa11.52□□□□□ -0.57
RAB35-204ENST00000540803 LRP2P98164 4655 aa11.52□□□□□ -0.57
RAB35-204ENST00000540803 NKAPP1Q8N9T2 125 aa11.51□□□□□ -0.57
RAB35-204ENST00000540803 BCE1O60756 84 aa11.5□□□□□ -0.57
RAB35-204ENST00000540803 SCO1O75880 301 aa11.5□□□□□ -0.57
RAB35-204ENST00000540803 LEPROTL1O95214 131 aa11.49□□□□□ -0.57
RAB35-204ENST00000540803 VPREB1P12018 145 aa11.49□□□□□ -0.57
RAB35-204ENST00000540803 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
RAB35-204ENST00000540803 H0Y8G0 127 aa11.47□□□□□ -0.57
RAB35-204ENST00000540803 Q8NDZ9 215 aa11.47□□□□□ -0.57
RAB35-204ENST00000540803 IGKV2-28A0A075B6P5 120 aa11.45□□□□□ -0.58
RAB35-204ENST00000540803 IGKV2D-28P01615 120 aa11.45□□□□□ -0.58
RAB35-204ENST00000540803 RPL28P46779 137 aaKnown RBP11.45□□□□□ -0.58
RAB35-204ENST00000540803 LINC00158P58513 81 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms