RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SPANXA1	Q9NS26	97 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	APC	P25054	2843 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IGKV3D-7	A0A0C4DH55	119 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C9orf129	Q5T035	196 aa	Known RBP	4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	LINC00242	Q5T6M2	205 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C22orf24	Q9Y442	160 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	FBN3	Q75N90	2809 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IGHV4-28	A0A0C4DH34	117 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	RBMY1B	A6NDE4	496 aa	Known RBP	4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	RBMY1E	A6NEQ0	496 aa	Known RBP	4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	RBMY1D	P0C7P1	496 aa	Known RBP	4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	DEFB131B	A0A096LNP1	70 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	hADV29S1	A0JD25	119 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783		K7EIL1	84 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	CYSTM1	Q9H1C7	97 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	WFDC10A	Q9H1F0	79 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	KPRP	Q5T749	579 aa	Predicted RBP	4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	FAM222A	Q5U5X8	452 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	TOMM7	Q9P0U1	55 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783		A0A087WVE0	104 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	ACYP1	P07311	99 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C14orf132	Q9NPU4	83 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	PRO0255	Q9UI72	69 aa		4.01	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	AKAP9	Q99996	3911 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	SMIM1	B2RUZ4	78 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	UQCRQ	O14949	82 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	TIMM17B	O60830	172 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C19orf73	Q9NVV2	129 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	CRP	P02741	224 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C11orf68	Q9H3H3	251 aa	Known RBP	4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	SLPI	P03973	132 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	LINC00526	Q96FQ7	95 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IMUP	Q9GZP8	106 aa		4	□□□□□ -1.77
RAPGEF4-215	ENST00000540783		A0A087WYN8	130 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783		A0A0J9YWU9	116 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C3orf84	H3BNL1	204 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	MAL	P21145	153 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	CSDC2	Q9Y534	153 aa	Known RBP	3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	DNAJC30	Q96LL9	226 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IGLV5-39	A0A0G2JS06	123 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	KRTAP10-11	P60412	298 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	MIR7-3HG	Q8N6C7	128 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	LINC00337	Q8N6G1	96 aa		3.99	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IGLV5-45	A0A087WSX0	123 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783		A0A1B0GX51	115 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	NCR3	O14931	201 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	TRAC	P01848	142 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	COX7C	P15954	63 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C5orf38	Q86SI9	138 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	TRBV10-1	A0A0K0K1A3	114 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	DNAL4	O96015	105 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	MUC7	Q8TAX7	377 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C2orf48	Q96LS8	159 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	DEFB4A	O15263	64 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	PFN2	P35080	140 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	LINC00158	P58513	81 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	NTM-AS1	Q6ZSK4	140 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	LINC00846	Q9NV44	126 aa		3.98	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	PSCA	O43653	123 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C11orf72	Q8NBR9	251 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	OR13C6P	Q8NH95	151 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	SMIM11B	Q8TCY0	68 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	OVOL2	Q9BRP0	275 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	LECT2	O14960	151 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	INAFM2	P0DMQ5	153 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	SND1-IT1	Q9HBX3	110 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	RETN	Q9HD89	108 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IGKV2-28	A0A075B6P5	120 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IGKV2D-28	P01615	120 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	DSCR8	Q96T75	97 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	TM2D3	Q9BRN9	247 aa		3.97	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	GYPE	P15421	78 aa		3.96	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	HIST1H4A	P62805	103 aa	Known RBP	3.96	□□□□□ -1.77
RAPGEF4-215	ENST00000540783		Q6ZTI0	123 aa		3.96	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	PKIG	Q9Y2B9	76 aa		3.96	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	MXRA5	Q9NR99	2828 aa		3.96	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	LOC100131303	A0A0U1RQF7	123 aa		3.96	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		J3KT08	172 aa		3.96	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		K7EQD1	137 aa		3.96	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	CDC42SE2	Q9NRR3	84 aa		3.96	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	C1orf158	Q8N1D5	194 aa		3.96	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	NSD1	Q96L73	2696 aa	Predicted RBP	3.96	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	TMEM243	Q9BU79	118 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	TRAV13-2	A0A0B4J235	113 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783		A8MTW9	85 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	ATOX1	O00244	68 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	CXCL5	P42830	114 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	RPL28	P46779	137 aa	Known RBP	3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	NANOS2	P60321	138 aa	Known RBP	3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	RPL18A	Q02543	176 aa	Known RBP	3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	COPS9	Q8WXC6	57 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	TRBV6-4	A0A1B0GX49	114 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	NF1	P21359	2839 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	CRYGA	P11844	174 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	LINC01561	Q8N1V8	128 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	COX7B2	Q8TF08	81 aa		3.95	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	PRR3	P79522	188 aa	Known RBP	3.94	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	USP17L23	D6RBM5	183 aa		3.94	□□□□□ -1.78
RAPGEF4-215	ENST00000540783	OXT	P01178	125 aa		3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms