RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 UBE2WQ96B02 151 aa7.04□□□□□ -1.28
ATL3-204ENST00000540699 DNAH5Q8TE73 4624 aa7.04□□□□□ -1.28
ATL3-204ENST00000540699 HSPG2P98160 4391 aa7.04□□□□□ -1.28
ATL3-204ENST00000540699 TNP2Q05952 138 aa7.03□□□□□ -1.28
ATL3-204ENST00000540699 GAGE12HA6NDE8 117 aa7.02□□□□□ -1.29
ATL3-204ENST00000540699 COX7A2LO14548 114 aa7.02□□□□□ -1.29
ATL3-204ENST00000540699 NDUFA1O15239 70 aa7.02□□□□□ -1.29
ATL3-204ENST00000540699 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
ATL3-204ENST00000540699 NDUFA12Q9UI09 145 aa7.02□□□□□ -1.29
ATL3-204ENST00000540699 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
ATL3-204ENST00000540699 TM2D2Q9BX73 214 aa7.01□□□□□ -1.29
ATL3-204ENST00000540699 Q9HAA7 133 aa7.01□□□□□ -1.29
ATL3-204ENST00000540699 A0A0J9YXY3 114 aa7□□□□□ -1.29
ATL3-204ENST00000540699 LRCOL1A6NCL2 159 aa7□□□□□ -1.29
ATL3-204ENST00000540699 EREGO14944 169 aa7□□□□□ -1.29
ATL3-204ENST00000540699 HSD52Q0P140 79 aa7□□□□□ -1.29
ATL3-204ENST00000540699 KIAA0087Q14695 138 aa7□□□□□ -1.29
ATL3-204ENST00000540699 Q8IZM0 81 aa7□□□□□ -1.29
ATL3-204ENST00000540699 RMI2Q96E14 147 aa7□□□□□ -1.29
ATL3-204ENST00000540699 SNHG12Q9BXW3 62 aa7□□□□□ -1.29
ATL3-204ENST00000540699 COX11Q9Y6N1 276 aa7□□□□□ -1.29
ATL3-204ENST00000540699 LRP1BQ9NZR2 4599 aa7□□□□□ -1.29
ATL3-204ENST00000540699 A0A087WTM6 91 aa6.99□□□□□ -1.29
ATL3-204ENST00000540699 BVES-AS1Q5T3Y7 98 aa6.99□□□□□ -1.29
ATL3-204ENST00000540699 SCGB1D4Q6XE38 83 aa6.99□□□□□ -1.29
ATL3-204ENST00000540699 LITAFQ99732 161 aa6.99□□□□□ -1.29
ATL3-204ENST00000540699 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
ATL3-204ENST00000540699 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
ATL3-204ENST00000540699 M0R143 59 aa6.98□□□□□ -1.29
ATL3-204ENST00000540699 TAL2Q16559 108 aa6.98□□□□□ -1.29
ATL3-204ENST00000540699 ORAOV1Q8WV07 137 aa6.98□□□□□ -1.29
ATL3-204ENST00000540699 C1orf43Q9BWL3 253 aa6.98□□□□□ -1.29
ATL3-204ENST00000540699 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
ATL3-204ENST00000540699 PSCAO43653 123 aa6.97□□□□□ -1.29
ATL3-204ENST00000540699 TIMM17BO60830 172 aa6.97□□□□□ -1.29
ATL3-204ENST00000540699 MALP21145 153 aa6.97□□□□□ -1.29
ATL3-204ENST00000540699 HINT1P49773 126 aaPredicted RBP6.97□□□□□ -1.29
ATL3-204ENST00000540699 HERV-K104P63124 156 aa6.97□□□□□ -1.29
ATL3-204ENST00000540699 TOMM7Q9P0U1 55 aa6.97□□□□□ -1.29
ATL3-204ENST00000540699 APOMO95445 188 aa6.96□□□□□ -1.3
ATL3-204ENST00000540699 SFTA2Q6UW10 78 aa6.96□□□□□ -1.3
ATL3-204ENST00000540699 CEND1Q8N111 149 aa6.96□□□□□ -1.3
ATL3-204ENST00000540699 APOBP04114 4563 aaKnown RBP6.95□□□□□ -1.3
ATL3-204ENST00000540699 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 PRSS2P07478 247 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 CXCL5P42830 114 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 SPAG11BQ08648 103 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 SPANXDQ9BXN6 97 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 DNAH8Q96JB1 4490 aa6.95□□□□□ -1.3
ATL3-204ENST00000540699 FXYD2P54710 66 aa6.94□□□□□ -1.3
ATL3-204ENST00000540699 WFDC2Q14508 124 aa6.94□□□□□ -1.3
ATL3-204ENST00000540699 C6orf226Q5I0X4 101 aa6.94□□□□□ -1.3
ATL3-204ENST00000540699 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
ATL3-204ENST00000540699 HIST1H4GQ99525 98 aa6.94□□□□□ -1.3
ATL3-204ENST00000540699 GVQW2A0A096LPI5 108 aaPredicted RBP6.93□□□□□ -1.3
ATL3-204ENST00000540699 C16orf90A8MZG2 172 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 GCSHP23434 173 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 BATFQ16520 125 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 CFAP161Q6P656 301 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 Q6ZVH6 145 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 Q8N814 137 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
ATL3-204ENST00000540699 PGPEP1Q9NXJ5 209 aa6.93□□□□□ -1.3
ATL3-204ENST00000540699 SMIM13P0DJ93 91 aa6.92□□□□□ -1.3
ATL3-204ENST00000540699 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
ATL3-204ENST00000540699 SRSF9Q13242 221 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATL3-204ENST00000540699 LBHQ53QV2 105 aaPredicted RBP6.92□□□□□ -1.3
ATL3-204ENST00000540699 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
ATL3-204ENST00000540699 CKS1BP61024 79 aa6.91□□□□□ -1.3
ATL3-204ENST00000540699 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
ATL3-204ENST00000540699 LINC00526Q96FQ7 95 aa6.91□□□□□ -1.3
ATL3-204ENST00000540699 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
ATL3-204ENST00000540699 A0A1B0GWB2 263 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 USP17L23D6RBM5 183 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 LECT2O14960 151 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 CDK2AP2O75956 126 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 IFITM1P13164 125 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 HIGD2BQ4VC39 106 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 C14orf177Q52M58 125 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 COL5A1-AS1Q5SY13 56 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 C10orf25Q5T742 122 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 UNQ6190/PRO20217Q6UXQ8 127 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 MUSTN1Q8IVN3 82 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 DAND5Q8N907 189 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 C2orf48Q96LS8 159 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 PPDPFQ9H3Y8 114 aa6.9□□□□□ -1.3
ATL3-204ENST00000540699 A0A0U1RRA0 63 aa6.89□□□□□ -1.31
ATL3-204ENST00000540699 F8WDY8 70 aa6.89□□□□□ -1.31
ATL3-204ENST00000540699 EIF4EBP3O60516 100 aaPredicted RBP6.89□□□□□ -1.31
ATL3-204ENST00000540699 SOSTDC1Q6X4U4 206 aa6.89□□□□□ -1.31
ATL3-204ENST00000540699 A6NDN8 102 aa6.88□□□□□ -1.31
ATL3-204ENST00000540699 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
ATL3-204ENST00000540699 COX17Q14061 63 aa6.88□□□□□ -1.31
ATL3-204ENST00000540699 MIR7-3HGQ8N6C7 128 aa6.88□□□□□ -1.31
ATL3-204ENST00000540699 LINC00308Q8TCZ7 52 aa6.88□□□□□ -1.31
ATL3-204ENST00000540699 C6orf48Q9UBA6 75 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms