RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 MIAQ16674 131 aa6.45□□□□□ -1.38
PAAF1-209ENST00000540659 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
PAAF1-209ENST00000540659 LINC01561Q8N1V8 128 aa6.45□□□□□ -1.38
PAAF1-209ENST00000540659 A4D1N5 150 aa6.44□□□□□ -1.38
PAAF1-209ENST00000540659 C9orf118A6NHY6 69 aa6.44□□□□□ -1.38
PAAF1-209ENST00000540659 RPL24P83731 157 aaKnown RBP6.44□□□□□ -1.38
PAAF1-209ENST00000540659 VAMP3Q15836 100 aa6.44□□□□□ -1.38
PAAF1-209ENST00000540659 LINC01556Q5JQF7 62 aa6.44□□□□□ -1.38
PAAF1-209ENST00000540659 CFAP161Q6P656 301 aa6.44□□□□□ -1.38
PAAF1-209ENST00000540659 STARD9Q9P2P6 4700 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 TIMM17BO60830 172 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 C2orf82Q6UX34 121 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 UBE2DNLQ8IWF7 75 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 Q8IZM0 81 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 MUC7Q8TAX7 377 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 COPS9Q8WXC6 57 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 UPK3BQ9BT76 320 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 Q9HAA7 133 aa6.43□□□□□ -1.38
PAAF1-209ENST00000540659 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
PAAF1-209ENST00000540659 CFC1P0CG37 223 aa6.42□□□□□ -1.38
PAAF1-209ENST00000540659 PFN2P35080 140 aa6.42□□□□□ -1.38
PAAF1-209ENST00000540659 LINC00158P58513 81 aa6.42□□□□□ -1.38
PAAF1-209ENST00000540659 CKS1BP61024 79 aa6.42□□□□□ -1.38
PAAF1-209ENST00000540659 IGKV2D-24A0A075B6R9 120 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 DNAH10OSP0CZ25 163 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 TTC32Q5I0X7 151 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 C6orf223Q8N319 242 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 LINC00308Q8TCZ7 52 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 LINC00526Q96FQ7 95 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 LYSTQ99698 3801 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 C1orf43Q9BWL3 253 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
PAAF1-209ENST00000540659 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.4□□□□□ -1.38
PAAF1-209ENST00000540659 A0A1W2PPM0 123 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 C3orf84H3BNL1 204 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
PAAF1-209ENST00000540659 IFITM1P13164 125 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 KIAA0087Q14695 138 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 HIGD2BQ4VC39 106 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 MIR7-3HGQ8N6C7 128 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 ERG28Q9UKR5 140 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 APLNQ9ULZ1 77 aa6.4□□□□□ -1.38
PAAF1-209ENST00000540659 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
PAAF1-209ENST00000540659 DYNC2H1Q8NCM8 4307 aaKnown RBP6.39□□□□□ -1.39
PAAF1-209ENST00000540659 F8WDY8 70 aa6.39□□□□□ -1.39
PAAF1-209ENST00000540659 H7C2G1 150 aa6.39□□□□□ -1.39
PAAF1-209ENST00000540659 TSPAN13O95857 204 aa6.39□□□□□ -1.39
PAAF1-209ENST00000540659 CXCL5P42830 114 aa6.39□□□□□ -1.39
PAAF1-209ENST00000540659 CASC10Q5T4H9 136 aa6.39□□□□□ -1.39
PAAF1-209ENST00000540659 SOSTDC1Q6X4U4 206 aa6.39□□□□□ -1.39
PAAF1-209ENST00000540659 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
PAAF1-209ENST00000540659 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
PAAF1-209ENST00000540659 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
PAAF1-209ENST00000540659 FABP2P12104 132 aa6.38□□□□□ -1.39
PAAF1-209ENST00000540659 Q1RN00 199 aa6.38□□□□□ -1.39
PAAF1-209ENST00000540659 KRTAP26-1Q6PEX3 210 aa6.38□□□□□ -1.39
PAAF1-209ENST00000540659 PRO1854Q9UHT4 67 aa6.38□□□□□ -1.39
PAAF1-209ENST00000540659 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 LOC107984156A0A0G2JMH3 177 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 GAGE10A6NGK3 116 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 UBE2V1Q13404 147 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
PAAF1-209ENST00000540659 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 ARL17AQ8IVW1 177 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 SPCS1Q9Y6A9 102 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 DNAH1Q9P2D7 4330 aa6.37□□□□□ -1.39
PAAF1-209ENST00000540659 ZNF561-AS1K7EIQ3 104 aa6.36□□□□□ -1.39
PAAF1-209ENST00000540659 K7EP34 96 aa6.36□□□□□ -1.39
PAAF1-209ENST00000540659 PSMB2P49721 201 aa6.36□□□□□ -1.39
PAAF1-209ENST00000540659 C10orf25Q5T742 122 aa6.36□□□□□ -1.39
PAAF1-209ENST00000540659 RPL13AP40429 203 aaKnown RBP6.35□□□□□ -1.39
PAAF1-209ENST00000540659 GTF2H5Q6ZYL4 71 aa6.35□□□□□ -1.39
PAAF1-209ENST00000540659 C15orf56Q8N910 161 aa6.35□□□□□ -1.39
PAAF1-209ENST00000540659 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
PAAF1-209ENST00000540659 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
PAAF1-209ENST00000540659 PKIGQ9Y2B9 76 aa6.35□□□□□ -1.39
PAAF1-209ENST00000540659 SND1-IT1Q9HBX3 110 aa6.34□□□□□ -1.39
PAAF1-209ENST00000540659 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
PAAF1-209ENST00000540659 SCGB1C2P0DMR2 95 aa6.33□□□□□ -1.4
PAAF1-209ENST00000540659 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
PAAF1-209ENST00000540659 C6orf48Q9UBA6 75 aa6.33□□□□□ -1.4
PAAF1-209ENST00000540659 COX17Q14061 63 aa6.32□□□□□ -1.4
PAAF1-209ENST00000540659 Q6ZRU5 148 aa6.32□□□□□ -1.4
PAAF1-209ENST00000540659 SACSQ9NZJ4 4579 aa6.31□□□□□ -1.4
PAAF1-209ENST00000540659 LECT2O14960 151 aa6.31□□□□□ -1.4
PAAF1-209ENST00000540659 PSCAO43653 123 aa6.31□□□□□ -1.4
PAAF1-209ENST00000540659 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
PAAF1-209ENST00000540659 IGKV2-28A0A075B6P5 120 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 GVQW2A0A096LPI5 108 aaPredicted RBP6.3□□□□□ -1.4
PAAF1-209ENST00000540659 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 H3BMG7 143 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 TRIAP1O43715 76 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 IGKV2D-28P01615 120 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 OR13C6PQ8NH95 151 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
PAAF1-209ENST00000540659 RYR2Q92736 4967 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms