RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 RNASE1P07998 156 aaKnown RBP8.57□□□□□ -1.04
NPC1-202ENST00000540608 OBSCN-AS1Q96MR7 158 aa8.56□□□□□ -1.04
NPC1-202ENST00000540608 PAX4O43316 350 aa8.56□□□□□ -1.04
NPC1-202ENST00000540608 ATP5G1P05496 136 aa8.56□□□□□ -1.04
NPC1-202ENST00000540608 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
NPC1-202ENST00000540608 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
NPC1-202ENST00000540608 TMEM126AQ9H061 195 aa8.55□□□□□ -1.04
NPC1-202ENST00000540608 LY6G6DO95868 133 aa8.54□□□□□ -1.04
NPC1-202ENST00000540608 KIR2DL5BQ8NHK3 375 aa8.54□□□□□ -1.04
NPC1-202ENST00000540608 LECT2O14960 151 aa8.54□□□□□ -1.04
NPC1-202ENST00000540608 OR13C6PQ8NH95 151 aa8.54□□□□□ -1.04
NPC1-202ENST00000540608 A0A1B0GUV1 79 aa8.53□□□□□ -1.04
NPC1-202ENST00000540608 DEFB130BP0DP73 79 aa8.53□□□□□ -1.04
NPC1-202ENST00000540608 DEFB130AP0DP74 79 aa8.53□□□□□ -1.04
NPC1-202ENST00000540608 SS18Q15532 418 aa8.53□□□□□ -1.04
NPC1-202ENST00000540608 C14orf132Q9NPU4 83 aa8.53□□□□□ -1.04
NPC1-202ENST00000540608 KLK5Q9Y337 293 aaPredicted RBP8.53□□□□□ -1.04
NPC1-202ENST00000540608 C3orf22Q8N5N4 141 aa8.53□□□□□ -1.04
NPC1-202ENST00000540608 LINC00612Q8N6U2 182 aa8.53□□□□□ -1.04
NPC1-202ENST00000540608 XCL1P47992 114 aa8.52□□□□□ -1.05
NPC1-202ENST00000540608 GYPEP15421 78 aa8.52□□□□□ -1.05
NPC1-202ENST00000540608 Q8IZM0 81 aa8.52□□□□□ -1.05
NPC1-202ENST00000540608 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.05
NPC1-202ENST00000540608 C11orf68Q9H3H3 251 aaKnown RBP8.52□□□□□ -1.05
NPC1-202ENST00000540608 UQCRQO14949 82 aa8.51□□□□□ -1.05
NPC1-202ENST00000540608 SMIM20Q8N5G0 67 aa8.5□□□□□ -1.05
NPC1-202ENST00000540608 HIST1H4AP62805 103 aaKnown RBP8.5□□□□□ -1.05
NPC1-202ENST00000540608 SLPIP03973 132 aa8.5□□□□□ -1.05
NPC1-202ENST00000540608 HILS1P60008 231 aa8.5□□□□□ -1.05
NPC1-202ENST00000540608 C3orf56Q8N813 242 aa8.5□□□□□ -1.05
NPC1-202ENST00000540608 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
NPC1-202ENST00000540608 ORMDL1Q9P0S3 153 aa8.5□□□□□ -1.05
NPC1-202ENST00000540608 NCR3O14931 201 aa8.49□□□□□ -1.05
NPC1-202ENST00000540608 C9orf153Q5TBE3 101 aa8.49□□□□□ -1.05
NPC1-202ENST00000540608 LINC00846Q9NV44 126 aa8.49□□□□□ -1.05
NPC1-202ENST00000540608 UNC79Q9P2D8 2635 aa8.48□□□□□ -1.05
NPC1-202ENST00000540608 Q6JHZ5 121 aa8.48□□□□□ -1.05
NPC1-202ENST00000540608 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
NPC1-202ENST00000540608 SMR3AQ99954 134 aa8.48□□□□□ -1.05
NPC1-202ENST00000540608 KRTAP10-3P60369 221 aa8.48□□□□□ -1.05
NPC1-202ENST00000540608 PRO0255Q9UI72 69 aa8.48□□□□□ -1.05
NPC1-202ENST00000540608 A0A1B0GX51 115 aa8.47□□□□□ -1.05
NPC1-202ENST00000540608 COX7CP15954 63 aa8.47□□□□□ -1.05
NPC1-202ENST00000540608 HELZ2Q9BYK8 2649 aaKnown RBP8.47□□□□□ -1.05
NPC1-202ENST00000540608 NANOS2P60321 138 aaKnown RBP8.47□□□□□ -1.05
NPC1-202ENST00000540608 CLPSL2Q6UWE3 100 aa8.47□□□□□ -1.05
NPC1-202ENST00000540608 ATOX1O00244 68 aa8.46□□□□□ -1.05
NPC1-202ENST00000540608 NDUFC2O95298 119 aa8.46□□□□□ -1.05
NPC1-202ENST00000540608 COX17Q14061 63 aa8.46□□□□□ -1.05
NPC1-202ENST00000540608 C2orf48Q96LS8 159 aa8.46□□□□□ -1.05
NPC1-202ENST00000540608 X6R8D5 127 aa8.46□□□□□ -1.05
NPC1-202ENST00000540608 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.06
NPC1-202ENST00000540608 KIAA0087Q14695 138 aa8.46□□□□□ -1.06
NPC1-202ENST00000540608 IGKV3D-7A0A0C4DH55 119 aa8.45□□□□□ -1.06
NPC1-202ENST00000540608 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
NPC1-202ENST00000540608 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
NPC1-202ENST00000540608 GCN1Q92616 2671 aaKnown RBP8.45□□□□□ -1.06
NPC1-202ENST00000540608 VWFP04275 2813 aa8.45□□□□□ -1.06
NPC1-202ENST00000540608 CCKP06307 115 aa8.45□□□□□ -1.06
NPC1-202ENST00000540608 Q8N814 137 aa8.45□□□□□ -1.06
NPC1-202ENST00000540608 NBEAL2Q6ZNJ1 2754 aa8.45□□□□□ -1.06
NPC1-202ENST00000540608 A0A096LPF7 62 aa8.44□□□□□ -1.06
NPC1-202ENST00000540608 FN1P02751 2386 aaKnown RBP8.44□□□□□ -1.06
NPC1-202ENST00000540608 LINC00269Q8N2A0 174 aa8.44□□□□□ -1.06
NPC1-202ENST00000540608 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
NPC1-202ENST00000540608 JMJD7-PLA2G4BH0Y9G9 81 aa8.44□□□□□ -1.06
NPC1-202ENST00000540608 FASNP49327 2511 aaKnown RBP8.44□□□□□ -1.06
NPC1-202ENST00000540608 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
NPC1-202ENST00000540608 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
NPC1-202ENST00000540608 TMEM256-PLSCR3K7ERE1 68 aa8.43□□□□□ -1.06
NPC1-202ENST00000540608 CRYGAP11844 174 aa8.43□□□□□ -1.06
NPC1-202ENST00000540608 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
NPC1-202ENST00000540608 LINC00482Q8N8I6 264 aa8.42□□□□□ -1.06
NPC1-202ENST00000540608 HIVEP2P31629 2446 aa8.42□□□□□ -1.06
NPC1-202ENST00000540608 SPATA3Q8NHX4 192 aa8.42□□□□□ -1.06
NPC1-202ENST00000540608 LYRM9A8MSI8 78 aa8.41□□□□□ -1.06
NPC1-202ENST00000540608 REG3AQ06141 175 aa8.4□□□□□ -1.06
NPC1-202ENST00000540608 IGLV10-54A0A075B6I4 117 aa8.39□□□□□ -1.07
NPC1-202ENST00000540608 ANGP03950 147 aaKnown RBP8.39□□□□□ -1.07
NPC1-202ENST00000540608 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
NPC1-202ENST00000540608 S100A7L2Q5SY68 101 aa8.39□□□□□ -1.07
NPC1-202ENST00000540608 A0A087WVE0 104 aa8.39□□□□□ -1.07
NPC1-202ENST00000540608 C6orf99Q4VX62 202 aa8.38□□□□□ -1.07
NPC1-202ENST00000540608 Q8N3U1 123 aa8.38□□□□□ -1.07
NPC1-202ENST00000540608 SERP2Q8N6R1 65 aa8.38□□□□□ -1.07
NPC1-202ENST00000540608 Q8NDZ9 215 aa8.38□□□□□ -1.07
NPC1-202ENST00000540608 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
NPC1-202ENST00000540608 LINC00575Q6W349 94 aa8.37□□□□□ -1.07
NPC1-202ENST00000540608 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
NPC1-202ENST00000540608 hADV29S1A0JD25 119 aa8.36□□□□□ -1.07
NPC1-202ENST00000540608 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
NPC1-202ENST00000540608 DEFB4AO15263 64 aa8.36□□□□□ -1.07
NPC1-202ENST00000540608 ATP5EP2Q5VTU8 51 aa8.36□□□□□ -1.07
NPC1-202ENST00000540608 LYPD5Q6UWN5 251 aa8.36□□□□□ -1.07
NPC1-202ENST00000540608 MUC7Q8TAX7 377 aa8.36□□□□□ -1.07
NPC1-202ENST00000540608 HECTD1Q9ULT8 2610 aa8.35□□□□□ -1.07
NPC1-202ENST00000540608 DAD1P61803 113 aa8.34□□□□□ -1.07
NPC1-202ENST00000540608 DEFB135Q30KP9 77 aa8.34□□□□□ -1.07
NPC1-202ENST00000540608 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
NPC1-202ENST00000540608 UNQ6190/PRO20217Q6UXQ8 127 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms