RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 DPH3Q96FX2 82 aa7.15□□□□□ -1.26
TMEM258-205ENST00000540434 MUC2Q02817 5179 aa7.15□□□□□ -1.26
TMEM258-205ENST00000540434 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
TMEM258-205ENST00000540434 GAGE2BQ13066 116 aa7.14□□□□□ -1.27
TMEM258-205ENST00000540434 STPG4Q8N801 248 aa7.14□□□□□ -1.27
TMEM258-205ENST00000540434 IGLV5-45A0A087WSX0 123 aa7.13□□□□□ -1.27
TMEM258-205ENST00000540434 TINCRA0A1B0GVN0 87 aa7.13□□□□□ -1.27
TMEM258-205ENST00000540434 SMIM1B2RUZ4 78 aa7.13□□□□□ -1.27
TMEM258-205ENST00000540434 KRTAP7-1Q8IUC3 87 aa7.13□□□□□ -1.27
TMEM258-205ENST00000540434 LINC01561Q8N1V8 128 aa7.13□□□□□ -1.27
TMEM258-205ENST00000540434 MRPL35Q9NZE8 188 aaKnown RBP7.13□□□□□ -1.27
TMEM258-205ENST00000540434 LOC107984640A0A0U1RRK4 108 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 NDUFA6P56556 154 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 HERVK_113P63121 156 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 RNF151Q2KHN1 245 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 PAPPA-AS1Q5QFB9 102 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 Q6ZRP5 223 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 LINC00469Q8N7U9 141 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 GEMIN7Q9H840 131 aaKnown RBP7.12□□□□□ -1.27
TMEM258-205ENST00000540434 TOMM7Q9P0U1 55 aa7.12□□□□□ -1.27
TMEM258-205ENST00000540434 FAM168BA1KXE4 195 aa7.11□□□□□ -1.27
TMEM258-205ENST00000540434 NDUFA1O15239 70 aa7.11□□□□□ -1.27
TMEM258-205ENST00000540434 SERF1AO75920 110 aa7.11□□□□□ -1.27
TMEM258-205ENST00000540434 IGLC3P0DOY3 106 aa7.11□□□□□ -1.27
TMEM258-205ENST00000540434 RAB5BP61020 215 aa7.11□□□□□ -1.27
TMEM258-205ENST00000540434 CHCHD1Q96BP2 118 aaKnown RBP7.11□□□□□ -1.27
TMEM258-205ENST00000540434 LINC01549A6NIU2 74 aa7.1□□□□□ -1.27
TMEM258-205ENST00000540434 C11orf86A6NJI1 115 aa7.1□□□□□ -1.27
TMEM258-205ENST00000540434 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
TMEM258-205ENST00000540434 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
TMEM258-205ENST00000540434 BAGE3Q86Y29 109 aa7.1□□□□□ -1.27
TMEM258-205ENST00000540434 F8WDY8 70 aa7.09□□□□□ -1.27
TMEM258-205ENST00000540434 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
TMEM258-205ENST00000540434 RPL37AP61513 92 aaKnown RBP7.09□□□□□ -1.27
TMEM258-205ENST00000540434 SEC11AP67812 179 aa7.09□□□□□ -1.27
TMEM258-205ENST00000540434 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
TMEM258-205ENST00000540434 Q8IZM0 81 aa7.09□□□□□ -1.27
TMEM258-205ENST00000540434 ATP5LO75964 103 aa7.08□□□□□ -1.28
TMEM258-205ENST00000540434 GAGE2EQ4V326 116 aa7.08□□□□□ -1.28
TMEM258-205ENST00000540434 C6orf226Q5I0X4 101 aa7.08□□□□□ -1.28
TMEM258-205ENST00000540434 C9orf129Q5T035 196 aaKnown RBP7.08□□□□□ -1.28
TMEM258-205ENST00000540434 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
TMEM258-205ENST00000540434 GAGE2DQ9UEU5 116 aa7.08□□□□□ -1.28
TMEM258-205ENST00000540434 IGLV5-39A0A0G2JS06 123 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BKO60814 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HSBP1O75506 76 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BJP06899 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BOP23527 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BBP33778 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BDP58876 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BCP62807 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST2H2BEQ16778 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.07□□□□□ -1.28
TMEM258-205ENST00000540434 PHF5AQ7RTV0 110 aaKnown RBP7.07□□□□□ -1.28
TMEM258-205ENST00000540434 COX7B2Q8TF08 81 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BHQ93079 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 PACRGQ96M98 296 aaPredicted RBP7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BNQ99877 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 HIST1H2BMQ99879 126 aa7.07□□□□□ -1.28
TMEM258-205ENST00000540434 TRBV30A0A0K0K1B3 111 aa7.06□□□□□ -1.28
TMEM258-205ENST00000540434 PRSS2P07478 247 aa7.06□□□□□ -1.28
TMEM258-205ENST00000540434 CHTOPQ9Y3Y2 248 aaKnown RBP7.06□□□□□ -1.28
TMEM258-205ENST00000540434 FABP4P15090 132 aa7.05□□□□□ -1.28
TMEM258-205ENST00000540434 CKS1BP61024 79 aa7.05□□□□□ -1.28
TMEM258-205ENST00000540434 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
TMEM258-205ENST00000540434 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
TMEM258-205ENST00000540434 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
TMEM258-205ENST00000540434 F8VRH5 84 aa7.04□□□□□ -1.28
TMEM258-205ENST00000540434 XAGE1AQ9HD64 81 aa7.04□□□□□ -1.28
TMEM258-205ENST00000540434 PRR3P79522 188 aaKnown RBP7.03□□□□□ -1.28
TMEM258-205ENST00000540434 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
TMEM258-205ENST00000540434 FAM19A5Q7Z5A7 132 aaPredicted RBP7.03□□□□□ -1.28
TMEM258-205ENST00000540434 TMEM223A0PJW6 202 aa7.02□□□□□ -1.29
TMEM258-205ENST00000540434 H0Y8G0 127 aa7.02□□□□□ -1.29
TMEM258-205ENST00000540434 ATP6V1G1O75348 118 aa7.02□□□□□ -1.29
TMEM258-205ENST00000540434 LEPROTL1O95214 131 aa7.02□□□□□ -1.29
TMEM258-205ENST00000540434 PMCHL2Q9BQD1 86 aa7.02□□□□□ -1.29
TMEM258-205ENST00000540434 H3BRM9 83 aa7.01□□□□□ -1.29
TMEM258-205ENST00000540434 C7orf33Q8WU49 177 aa7.01□□□□□ -1.29
TMEM258-205ENST00000540434 ZNF625Q96I27 306 aaPredicted RBP7.01□□□□□ -1.29
TMEM258-205ENST00000540434 PSORS1C2Q9UIG4 136 aa7.01□□□□□ -1.29
TMEM258-205ENST00000540434 PKIGQ9Y2B9 76 aa7.01□□□□□ -1.29
TMEM258-205ENST00000540434 CXCL5P42830 114 aa6.99□□□□□ -1.29
TMEM258-205ENST00000540434 SRSF9Q13242 221 aaKnown RBP eCLIP6.99□□□□□ -1.29
TMEM258-205ENST00000540434 Q8NDZ9 215 aa6.99□□□□□ -1.29
TMEM258-205ENST00000540434 PFN2P35080 140 aa6.98□□□□□ -1.29
TMEM258-205ENST00000540434 TSPEAR-AS2P59090 65 aa6.98□□□□□ -1.29
TMEM258-205ENST00000540434 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
TMEM258-205ENST00000540434 M0QXV9 152 aa6.97□□□□□ -1.29
TMEM258-205ENST00000540434 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
TMEM258-205ENST00000540434 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
TMEM258-205ENST00000540434 COA6Q5JTJ3 125 aaKnown RBP6.96□□□□□ -1.3
TMEM258-205ENST00000540434 HSPB8Q9UJY1 196 aa6.96□□□□□ -1.3
TMEM258-205ENST00000540434 ERG28Q9UKR5 140 aa6.96□□□□□ -1.3
TMEM258-205ENST00000540434 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
TMEM258-205ENST00000540434 S100A1P23297 94 aa6.95□□□□□ -1.3
TMEM258-205ENST00000540434 LINC01600Q96MT4 127 aa6.95□□□□□ -1.3
TMEM258-205ENST00000540434 SYS1-DBNDD2H3BUS1 97 aa6.94□□□□□ -1.3
TMEM258-205ENST00000540434 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms