RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SPTBN1Q01082 2364 aaKnown RBP7.77□□□□□ -1.17
PBX1-212ENST00000540236 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
PBX1-212ENST00000540236 IGLV5-39A0A0G2JS06 123 aa7.76□□□□□ -1.17
PBX1-212ENST00000540236 PDE6GP18545 87 aa7.76□□□□□ -1.17
PBX1-212ENST00000540236 FRYLO94915 3013 aa7.76□□□□□ -1.17
PBX1-212ENST00000540236 PRR15Q8IV56 129 aa7.76□□□□□ -1.17
PBX1-212ENST00000540236 K7ENP7 123 aa7.75□□□□□ -1.17
PBX1-212ENST00000540236 UNQ6190/PRO20217Q6UXQ8 127 aa7.75□□□□□ -1.17
PBX1-212ENST00000540236 TRBV6-8A0A0A6YYG3 113 aa7.74□□□□□ -1.17
PBX1-212ENST00000540236 LINC01356Q8N9X3 169 aa7.74□□□□□ -1.17
PBX1-212ENST00000540236 CXCL6P80162 114 aa7.74□□□□□ -1.17
PBX1-212ENST00000540236 REG3AQ06141 175 aa7.74□□□□□ -1.17
PBX1-212ENST00000540236 PCNX1Q96RV3 2341 aa7.74□□□□□ -1.17
PBX1-212ENST00000540236 SPAG11AQ6PDA7 123 aa7.74□□□□□ -1.17
PBX1-212ENST00000540236 FRYQ5TBA9 3013 aa7.74□□□□□ -1.17
PBX1-212ENST00000540236 EYSQ5T1H1 3165 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 IGHV4-61A0A0C4DH41 118 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 C10orf25Q5T742 122 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 MUC4Q99102 2169 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 NBEAQ8NFP9 2946 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 KLKP1Q107X0 134 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 DMDP11532 3685 aa7.73□□□□□ -1.17
PBX1-212ENST00000540236 ZNF73O43830 326 aaPredicted RBP7.72□□□□□ -1.17
PBX1-212ENST00000540236 IGKV4-1P06312 121 aa7.72□□□□□ -1.17
PBX1-212ENST00000540236 K7EMT4 169 aa7.72□□□□□ -1.17
PBX1-212ENST00000540236 PTPRQQ9UMZ3 2332 aa7.72□□□□□ -1.17
PBX1-212ENST00000540236 B9D2Q9BPU9 175 aa7.72□□□□□ -1.17
PBX1-212ENST00000540236 IGKV2D-24A0A075B6R9 120 aa7.71□□□□□ -1.17
PBX1-212ENST00000540236 H3BUA1 57 aa7.71□□□□□ -1.17
PBX1-212ENST00000540236 CDK2AP2O75956 126 aa7.71□□□□□ -1.17
PBX1-212ENST00000540236 C16orf74Q96GX8 76 aa7.71□□□□□ -1.17
PBX1-212ENST00000540236 KTN1-AS1Q86SY8 53 aa7.71□□□□□ -1.18
PBX1-212ENST00000540236 PRUNE2Q8WUY3 3088 aa7.71□□□□□ -1.18
PBX1-212ENST00000540236 C22orf24Q9Y442 160 aa7.71□□□□□ -1.18
PBX1-212ENST00000540236 LYRM9A8MSI8 78 aa7.7□□□□□ -1.18
PBX1-212ENST00000540236 MSMBP08118 114 aa7.7□□□□□ -1.18
PBX1-212ENST00000540236 C11orf45Q8TAV5 145 aa7.7□□□□□ -1.18
PBX1-212ENST00000540236 C16orf95Q9H693 158 aa7.7□□□□□ -1.18
PBX1-212ENST00000540236 COL27A1Q8IZC6 1860 aaPredicted RBP7.7□□□□□ -1.18
PBX1-212ENST00000540236 CNOT1A5YKK6 2376 aaKnown RBP7.69□□□□□ -1.18
PBX1-212ENST00000540236 IGFL2Q6UWQ7 119 aa7.68□□□□□ -1.18
PBX1-212ENST00000540236 B4DSR2 109 aa7.68□□□□□ -1.18
PBX1-212ENST00000540236 CD164L2Q6UWJ8 174 aa7.68□□□□□ -1.18
PBX1-212ENST00000540236 IGFL3Q6UXB1 125 aa7.68□□□□□ -1.18
PBX1-212ENST00000540236 A6NDX4 124 aa7.67□□□□□ -1.18
PBX1-212ENST00000540236 C10orf142B7Z368 130 aa7.67□□□□□ -1.18
PBX1-212ENST00000540236 CYSRT1A8MQ03 144 aa7.66□□□□□ -1.18
PBX1-212ENST00000540236 H0Y9P7 68 aa7.66□□□□□ -1.18
PBX1-212ENST00000540236 SPTBN2O15020 2390 aa7.66□□□□□ -1.18
PBX1-212ENST00000540236 RPL37AP61513 92 aaKnown RBP7.66□□□□□ -1.18
PBX1-212ENST00000540236 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
PBX1-212ENST00000540236 CFAP47Q6ZTR5 3102 aa7.65□□□□□ -1.18
PBX1-212ENST00000540236 SYCNQ0VAF6 134 aa7.65□□□□□ -1.18
PBX1-212ENST00000540236 FAM104AQ969W3 186 aa7.65□□□□□ -1.18
PBX1-212ENST00000540236 Q8IZM0 81 aa7.64□□□□□ -1.19
PBX1-212ENST00000540236 A8MU10 97 aa7.64□□□□□ -1.19
PBX1-212ENST00000540236 Q6ZRP5 223 aa7.64□□□□□ -1.19
PBX1-212ENST00000540236 ASPMQ8IZT6 3477 aa7.63□□□□□ -1.19
PBX1-212ENST00000540236 A0A0G2JQZ4 141 aa7.63□□□□□ -1.19
PBX1-212ENST00000540236 A0A1W2PNN7 141 aa7.63□□□□□ -1.19
PBX1-212ENST00000540236 H3BQ85 93 aa7.63□□□□□ -1.19
PBX1-212ENST00000540236 PRAC1Q96KF2 57 aa7.63□□□□□ -1.19
PBX1-212ENST00000540236 LINC01600Q96MT4 127 aa7.63□□□□□ -1.19
PBX1-212ENST00000540236 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
PBX1-212ENST00000540236 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
PBX1-212ENST00000540236 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.62□□□□□ -1.19
PBX1-212ENST00000540236 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
PBX1-212ENST00000540236 TRBV7-4A0A0J9YYF1 115 aa7.61□□□□□ -1.19
PBX1-212ENST00000540236 CASC2Q6XLA1 102 aa7.61□□□□□ -1.19
PBX1-212ENST00000540236 CCL24O00175 119 aa7.61□□□□□ -1.19
PBX1-212ENST00000540236 NOTCH3Q9UM47 2321 aa7.61□□□□□ -1.19
PBX1-212ENST00000540236 SMG1Q96Q15 3661 aaKnown RBP7.61□□□□□ -1.19
PBX1-212ENST00000540236 KIAA0087Q14695 138 aa7.61□□□□□ -1.19
PBX1-212ENST00000540236 C1orf137Q5JT78 98 aa7.61□□□□□ -1.19
PBX1-212ENST00000540236 SPENQ96T58 3664 aaKnown RBP7.61□□□□□ -1.19
PBX1-212ENST00000540236 NDUFB1O75438 58 aa7.6□□□□□ -1.19
PBX1-212ENST00000540236 LMO4P61968 165 aa7.6□□□□□ -1.19
PBX1-212ENST00000540236 ST20-AS1Q8NBB2 130 aa7.6□□□□□ -1.19
PBX1-212ENST00000540236 PSCAO43653 123 aa7.59□□□□□ -1.19
PBX1-212ENST00000540236 ADORA2A-AS1P86434 159 aa7.59□□□□□ -1.19
PBX1-212ENST00000540236 DEFB135Q30KP9 77 aa7.59□□□□□ -1.19
PBX1-212ENST00000540236 OBSCN-AS1Q96MR7 158 aa7.59□□□□□ -1.19
PBX1-212ENST00000540236 CACNA1GO43497 2377 aa7.59□□□□□ -1.19
PBX1-212ENST00000540236 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.59□□□□□ -1.2
PBX1-212ENST00000540236 DEFB114Q30KQ6 69 aa7.59□□□□□ -1.2
PBX1-212ENST00000540236 LIMD2Q9BT23 127 aa7.58□□□□□ -1.2
PBX1-212ENST00000540236 CACNA1HO95180 2353 aa7.58□□□□□ -1.2
PBX1-212ENST00000540236 K7EQZ3 153 aa7.58□□□□□ -1.2
PBX1-212ENST00000540236 M0R378 163 aa7.58□□□□□ -1.2
PBX1-212ENST00000540236 MGAQ8IWI9 3026 aa7.58□□□□□ -1.2
PBX1-212ENST00000540236 PRRC2CQ9Y520 2896 aaKnown RBP7.58□□□□□ -1.2
PBX1-212ENST00000540236 IGLV1-40P01703 118 aa7.58□□□□□ -1.2
PBX1-212ENST00000540236 COX17Q14061 63 aa7.57□□□□□ -1.2
PBX1-212ENST00000540236 Q8NA96 180 aa7.57□□□□□ -1.2
PBX1-212ENST00000540236 ZNF706Q9Y5V0 76 aaPredicted RBP7.57□□□□□ -1.2
PBX1-212ENST00000540236 BCE1O60756 84 aa7.57□□□□□ -1.2
PBX1-212ENST00000540236 Q6ZTC4 211 aa7.56□□□□□ -1.2
PBX1-212ENST00000540236 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
PBX1-212ENST00000540236 KPRPQ5T749 579 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms