RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TRIQKQ629K1 86 aa2.04□□□□□ -2.08
C2CD3-214ENST00000540057 LYZL1Q6UWQ5 148 aa2.04□□□□□ -2.08
C2CD3-214ENST00000540057 Q6ZUT4 128 aa2.04□□□□□ -2.08
C2CD3-214ENST00000540057 BAGE2Q86Y30 109 aa2.04□□□□□ -2.08
C2CD3-214ENST00000540057 FAM19A2Q8N3H0 131 aa2.04□□□□□ -2.08
C2CD3-214ENST00000540057 PSMG3Q9BT73 122 aaPredicted RBP2.04□□□□□ -2.08
C2CD3-214ENST00000540057 RNASE7Q9H1E1 156 aaKnown RBP2.04□□□□□ -2.08
C2CD3-214ENST00000540057 NUDT15Q9NV35 164 aa2.04□□□□□ -2.08
C2CD3-214ENST00000540057 CSDC2Q9Y534 153 aaKnown RBP2.04□□□□□ -2.08
C2CD3-214ENST00000540057 KMT2DO14686 5537 aa2.04□□□□□ -2.08
C2CD3-214ENST00000540057 TRBV6-5A0A0K0K1A5 114 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 C7orf77A4D0Y5 90 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 F2Z2F3 143 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 PLA2G10O15496 165 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 SLC25A20O43772 301 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 MBP02144 154 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 MT1FP04733 61 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 RPS20P60866 119 aaKnown RBP2.03□□□□□ -2.08
C2CD3-214ENST00000540057 RPL32P62910 135 aaKnown RBP2.03□□□□□ -2.08
C2CD3-214ENST00000540057 SERF2P84101 59 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 STOML3Q8TAV4 291 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 PPP1R1CQ8WVI7 109 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 FAM210AQ96ND0 272 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 TCEAL7Q9BRU2 100 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 TNFSF18Q9UNG2 199 aa2.03□□□□□ -2.08
C2CD3-214ENST00000540057 CTXND1A0A1B0GTU2 59 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 C9orf92A6NGG3 77 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 MPC2O95563 127 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 S100A9P06702 114 aaKnown RBP2.02□□□□□ -2.09
C2CD3-214ENST00000540057 IL7P13232 177 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 S100A5P33763 92 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 FHITP49789 147 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 POLR2KP53803 58 aaKnown RBP2.02□□□□□ -2.09
C2CD3-214ENST00000540057 RPS29P62273 56 aaKnown RBP2.02□□□□□ -2.09
C2CD3-214ENST00000540057 CST9LP1Q5W188 147 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 FAM104AQ969W3 186 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 SPRR4Q96PI1 79 aa2.02□□□□□ -2.09
C2CD3-214ENST00000540057 IGKV2-28A0A075B6P5 120 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 TRBV27A0A0K0K1C4 114 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 LYRM1O43325 122 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 IGKV2D-28P01615 120 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 H2BFSP57053 126 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 Q6Q795 121 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 TEX261Q6UWH6 196 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 FAM19A1Q7Z5A9 133 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 CBLN2Q8IUK8 224 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 C9orf62Q8N4C0 152 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 CNFNQ9BYD5 112 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 ST20Q9HBF5 79 aa2.01□□□□□ -2.09
C2CD3-214ENST00000540057 MDN1Q9NU22 5596 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 XKRY2A2RUG3 117 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 RAB19A4D1S5 217 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 MAP1LC3B2A6NCE7 125 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 TMEM238C9JI98 176 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 SCO1O75880 301 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 IFNA1P01562 189 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 PET100P0DJ07 73 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 SNRPEP62304 92 aaKnown RBP2□□□□□ -2.09
C2CD3-214ENST00000540057 SMAGPQ0VAQ4 97 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 TMUB2Q71RG4 321 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 CCDC32Q9BV29 185 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 TIMM21Q9BVV7 248 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 HIGD2AQ9BW72 106 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 GNB1LQ9BYB4 327 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 MAP1LC3BQ9GZQ8 125 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 TMEM126AQ9H061 195 aa2□□□□□ -2.09
C2CD3-214ENST00000540057 TGIF2-C20orf24A0A0A6YYL0 155 aa1.99□□□□□ -2.09
C2CD3-214ENST00000540057 M0R378 163 aa1.99□□□□□ -2.09
C2CD3-214ENST00000540057 KRTAP2-3P0C7H8 128 aa1.99□□□□□ -2.09
C2CD3-214ENST00000540057 FCER1GP30273 86 aa1.99□□□□□ -2.09
C2CD3-214ENST00000540057 RPL35P42766 123 aaKnown RBP1.99□□□□□ -2.09
C2CD3-214ENST00000540057 KRTAP10-10P60014 251 aa1.99□□□□□ -2.09
C2CD3-214ENST00000540057 CKS1BP61024 79 aa1.99□□□□□ -2.09
C2CD3-214ENST00000540057 RPL37P61927 97 aaKnown RBP1.99□□□□□ -2.09
C2CD3-214ENST00000540057 KRTAP2-4Q9BYR9 128 aa1.99□□□□□ -2.09
C2CD3-214ENST00000540057 NOL3O60936 208 aaKnown RBP1.98□□□□□ -2.09
C2CD3-214ENST00000540057 IGLV6-57P01721 117 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 RPL39P62891 51 aaKnown RBP1.98□□□□□ -2.09
C2CD3-214ENST00000540057 HBBP68871 147 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 MOBPQ13875 183 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 CENPWQ5EE01 88 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 SSBP3-AS1Q7Z2R9 100 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 SMIM15Q7Z3B0 74 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 NKAPP1Q8N9T2 125 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 GEMIN7Q9H840 131 aaKnown RBP1.98□□□□□ -2.09
C2CD3-214ENST00000540057 TOMM7Q9P0U1 55 aa1.98□□□□□ -2.09
C2CD3-214ENST00000540057 ZNF706Q9Y5V0 76 aaPredicted RBP1.98□□□□□ -2.09
C2CD3-214ENST00000540057 FAM240BA0A1B0GVZ2 78 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 F8VRH5 84 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 PFDN1O60925 122 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 MRPS36P82909 103 aaKnown RBP1.97□□□□□ -2.09
C2CD3-214ENST00000540057 C6orf226Q5I0X4 101 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 AKR1C8PQ5T2L2 129 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 RPL7L1Q6DKI1 246 aaKnown RBP1.97□□□□□ -2.09
C2CD3-214ENST00000540057 LINC01551Q86U37 167 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 Q8IZM0 81 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 LINC01561Q8N1V8 128 aa1.97□□□□□ -2.09
C2CD3-214ENST00000540057 TRBV20OR9-2A0A075B6H5 130 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 SMKR1H3BMG3 65 aa1.96□□□□□ -2.1
C2CD3-214ENST00000540057 LGALS3P17931 250 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms