RNA–Protein interactions for RNA: ENST00000539741.5

TM7SF3-208, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-208ENST00000539741 TIMM17BO60830 172 aa13.42□□□□□ -0.26
TM7SF3-208ENST00000539741 CXCL5P42830 114 aa13.42□□□□□ -0.26
TM7SF3-208ENST00000539741 ORAOV1Q8WV07 137 aa13.42□□□□□ -0.26
TM7SF3-208ENST00000539741 ZNF625Q96I27 306 aaPredicted RBP13.42□□□□□ -0.26
TM7SF3-208ENST00000539741 HIST1H4GQ99525 98 aa13.42□□□□□ -0.26
TM7SF3-208ENST00000539741 CFAP161Q6P656 301 aa13.41□□□□□ -0.26
TM7SF3-208ENST00000539741 SNHG12Q9BXW3 62 aa13.41□□□□□ -0.26
TM7SF3-208ENST00000539741 IGKV2D-24A0A075B6R9 120 aa13.4□□□□□ -0.26
TM7SF3-208ENST00000539741 HINT1P49773 126 aaPredicted RBP13.4□□□□□ -0.26
TM7SF3-208ENST00000539741 CIRBPQ14011 172 aaKnown RBP13.39□□□□□ -0.27
TM7SF3-208ENST00000539741 LBHQ53QV2 105 aaPredicted RBP13.39□□□□□ -0.27
TM7SF3-208ENST00000539741 C6orf226Q5I0X4 101 aa13.39□□□□□ -0.27
TM7SF3-208ENST00000539741 TTC32Q5I0X7 151 aa13.39□□□□□ -0.27
TM7SF3-208ENST00000539741 BVES-AS1Q5T3Y7 98 aa13.39□□□□□ -0.27
TM7SF3-208ENST00000539741 KRTAP26-1Q6PEX3 210 aa13.39□□□□□ -0.27
TM7SF3-208ENST00000539741 EREGO14944 169 aa13.38□□□□□ -0.27
TM7SF3-208ENST00000539741 SRSF9Q13242 221 aaKnown RBP eCLIP13.38□□□□□ -0.27
TM7SF3-208ENST00000539741 BATFQ16520 125 aa13.38□□□□□ -0.27
TM7SF3-208ENST00000539741 Q9HAA7 133 aa13.38□□□□□ -0.27
TM7SF3-208ENST00000539741 COX11Q9Y6N1 276 aa13.38□□□□□ -0.27
TM7SF3-208ENST00000539741 SPAG11BQ08648 103 aa13.37□□□□□ -0.27
TM7SF3-208ENST00000539741 Q6ZVH6 145 aa13.37□□□□□ -0.27
TM7SF3-208ENST00000539741 CEND1Q8N111 149 aa13.37□□□□□ -0.27
TM7SF3-208ENST00000539741 GCSHP23434 173 aa13.36□□□□□ -0.27
TM7SF3-208ENST00000539741 CKS1BP61024 79 aa13.36□□□□□ -0.27
TM7SF3-208ENST00000539741 TM2D2Q9BX73 214 aa13.36□□□□□ -0.27
TM7SF3-208ENST00000539741 SPANXDQ9BXN6 97 aa13.36□□□□□ -0.27
TM7SF3-208ENST00000539741 SPANXCQ9NY87 97 aa13.36□□□□□ -0.27
TM7SF3-208ENST00000539741 MEIG1Q5JSS6 88 aa13.35□□□□□ -0.27
TM7SF3-208ENST00000539741 TMEM238LA0A1B0GVL6 79 aa13.34□□□□□ -0.27
TM7SF3-208ENST00000539741 A6NJY4 79 aa13.34□□□□□ -0.27
TM7SF3-208ENST00000539741 KIAA0087Q14695 138 aa13.34□□□□□ -0.27
TM7SF3-208ENST00000539741 A6NDN8 102 aa13.33□□□□□ -0.28
TM7SF3-208ENST00000539741 COL5A1-AS1Q5SY13 56 aa13.33□□□□□ -0.28
TM7SF3-208ENST00000539741 COPS9Q8WXC6 57 aa13.33□□□□□ -0.28
TM7SF3-208ENST00000539741 LITAFQ99732 161 aa13.33□□□□□ -0.28
TM7SF3-208ENST00000539741 PTTG1IPP53801 180 aa13.32□□□□□ -0.28
TM7SF3-208ENST00000539741 F8WDY8 70 aa13.31□□□□□ -0.28
TM7SF3-208ENST00000539741 IFITM1P13164 125 aa13.3□□□□□ -0.28
TM7SF3-208ENST00000539741 NBDYA0A0U1RRE5 68 aa13.29□□□□□ -0.28
TM7SF3-208ENST00000539741 ZNF561-AS1K7EIQ3 104 aa13.29□□□□□ -0.28
TM7SF3-208ENST00000539741 FXYD2P54710 66 aa13.29□□□□□ -0.28
TM7SF3-208ENST00000539741 RPL24P83731 157 aaKnown RBP13.28□□□□□ -0.28
TM7SF3-208ENST00000539741 C15orf56Q8N910 161 aa13.28□□□□□ -0.28
TM7SF3-208ENST00000539741 ERG28Q9UKR5 140 aa13.28□□□□□ -0.28
TM7SF3-208ENST00000539741 GVQW2A0A096LPI5 108 aaPredicted RBP13.27□□□□□ -0.29
TM7SF3-208ENST00000539741 SMIM13P0DJ93 91 aa13.27□□□□□ -0.29
TM7SF3-208ENST00000539741 LINC00336Q6ZUF6 198 aa13.27□□□□□ -0.29
TM7SF3-208ENST00000539741 C2orf48Q96LS8 159 aa13.27□□□□□ -0.29
TM7SF3-208ENST00000539741 KRTAP1-5Q9BYS1 174 aa13.27□□□□□ -0.29
TM7SF3-208ENST00000539741 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
TM7SF3-208ENST00000539741 COX17Q14061 63 aa13.26□□□□□ -0.29
TM7SF3-208ENST00000539741 ADAMTSL4-AS1Q5T5F5 129 aa13.26□□□□□ -0.29
TM7SF3-208ENST00000539741 C2orf82Q6UX34 121 aa13.26□□□□□ -0.29
TM7SF3-208ENST00000539741 NTN5Q8WTR8 489 aaPredicted RBP13.26□□□□□ -0.29
TM7SF3-208ENST00000539741 ABCA13Q86UQ4 5058 aa13.25□□□□□ -0.29
TM7SF3-208ENST00000539741 LINC00158P58513 81 aa13.24□□□□□ -0.29
TM7SF3-208ENST00000539741 HIGD2BQ4VC39 106 aa13.24□□□□□ -0.29
TM7SF3-208ENST00000539741 MUSTN1Q8IVN3 82 aa13.24□□□□□ -0.29
TM7SF3-208ENST00000539741 CAMK2N2Q96S95 79 aa13.23□□□□□ -0.29
TM7SF3-208ENST00000539741 NHP2Q9NX24 153 aaKnown RBP13.23□□□□□ -0.29
TM7SF3-208ENST00000539741 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.22□□□□□ -0.29
TM7SF3-208ENST00000539741 TRBV30A0A0K0K1B3 111 aa13.22□□□□□ -0.29
TM7SF3-208ENST00000539741 A0A1B0GVY2 172 aa13.22□□□□□ -0.29
TM7SF3-208ENST00000539741 C6orf223Q8N319 242 aa13.22□□□□□ -0.29
TM7SF3-208ENST00000539741 LINC00308Q8TCZ7 52 aa13.22□□□□□ -0.29
TM7SF3-208ENST00000539741 DNAH6Q9C0G6 4158 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 A0A0U1RRA0 63 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 A0A1B0GWB2 263 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 PSCAO43653 123 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 UNQ6190/PRO20217Q6UXQ8 127 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 MIR7-3HGQ8N6C7 128 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 DAND5Q8N907 189 aa13.21□□□□□ -0.29
TM7SF3-208ENST00000539741 PFN2P35080 140 aa13.2□□□□□ -0.3
TM7SF3-208ENST00000539741 VPS13DQ5THJ4 4388 aa13.2□□□□□ -0.3
TM7SF3-208ENST00000539741 A4D1N5 150 aa13.19□□□□□ -0.3
TM7SF3-208ENST00000539741 LINC00526Q96FQ7 95 aa13.19□□□□□ -0.3
TM7SF3-208ENST00000539741 PKHD1P08F94 4074 aa13.18□□□□□ -0.3
TM7SF3-208ENST00000539741 A0A0B4J2C4 111 aa13.17□□□□□ -0.3
TM7SF3-208ENST00000539741 NPC2P61916 151 aa13.17□□□□□ -0.3
TM7SF3-208ENST00000539741 C14orf177Q52M58 125 aa13.17□□□□□ -0.3
TM7SF3-208ENST00000539741 C10orf25Q5T742 122 aa13.17□□□□□ -0.3
TM7SF3-208ENST00000539741 SYCNQ0VAF6 134 aa13.16□□□□□ -0.3
TM7SF3-208ENST00000539741 C6orf48Q9UBA6 75 aa13.16□□□□□ -0.3
TM7SF3-208ENST00000539741 TAX1BP3O14907 124 aa13.15□□□□□ -0.3
TM7SF3-208ENST00000539741 Q6ZRU5 148 aa13.15□□□□□ -0.3
TM7SF3-208ENST00000539741 K7ERJ3 54 aa13.14□□□□□ -0.31
TM7SF3-208ENST00000539741 RNF151Q2KHN1 245 aa13.14□□□□□ -0.31
TM7SF3-208ENST00000539741 SOSTDC1Q6X4U4 206 aa13.14□□□□□ -0.31
TM7SF3-208ENST00000539741 RAB37Q96AX2 223 aa13.14□□□□□ -0.31
TM7SF3-208ENST00000539741 CARD19Q96LW7 228 aa13.14□□□□□ -0.31
TM7SF3-208ENST00000539741 KRTAP4-5Q9BYR2 181 aa13.14□□□□□ -0.31
TM7SF3-208ENST00000539741 CFC1BP0CG36 223 aa13.13□□□□□ -0.31
TM7SF3-208ENST00000539741 CFC1P0CG37 223 aa13.13□□□□□ -0.31
TM7SF3-208ENST00000539741 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
TM7SF3-208ENST00000539741 C9orf116Q5BN46 136 aaPredicted RBP13.12□□□□□ -0.31
TM7SF3-208ENST00000539741 Q6ZR54 194 aa13.12□□□□□ -0.31
TM7SF3-208ENST00000539741 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
TM7SF3-208ENST00000539741 SND1-IT1Q9HBX3 110 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms