RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 NHLRC4P0CG21 123 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-210ENST00000539599 GAGE2BQ13066 116 aa9.75□□□□□ -0.85
UBE3B-210ENST00000539599 GAGE2EQ4V326 116 aa9.75□□□□□ -0.85
UBE3B-210ENST00000539599 GAGE2DQ9UEU5 116 aa9.75□□□□□ -0.85
UBE3B-210ENST00000539599 CRPP02741 224 aa9.75□□□□□ -0.85
UBE3B-210ENST00000539599 INAFM1C9JVW0 142 aa9.74□□□□□ -0.85
UBE3B-210ENST00000539599 BAALC-AS2P0C853 105 aa9.74□□□□□ -0.85
UBE3B-210ENST00000539599 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
UBE3B-210ENST00000539599 J3QKU1 62 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 CMC4P56277 68 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-210ENST00000539599 LINC01600Q96MT4 127 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 A0A087WZ39 114 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 PAX4O43316 350 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 SLPIP03973 132 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 C9orf116Q5BN46 136 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-210ENST00000539599 C6orf226Q5I0X4 101 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 SMCR5Q8TEV8 140 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 FAM110AQ9BQ89 295 aa9.73□□□□□ -0.85
UBE3B-210ENST00000539599 LINC00526Q96FQ7 95 aa9.72□□□□□ -0.85
UBE3B-210ENST00000539599 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
UBE3B-210ENST00000539599 HTN3P15516 51 aa9.72□□□□□ -0.85
UBE3B-210ENST00000539599 LINC00269Q8N2A0 174 aa9.72□□□□□ -0.85
UBE3B-210ENST00000539599 NDUFV3P56181 108 aaKnown RBP9.69□□□□□ -0.86
UBE3B-210ENST00000539599 KIR2DL5BQ8NHK3 375 aa9.69□□□□□ -0.86
UBE3B-210ENST00000539599 CCDC179H3BU77 68 aa9.69□□□□□ -0.86
UBE3B-210ENST00000539599 TRAV13-2A0A0B4J235 113 aa9.68□□□□□ -0.86
UBE3B-210ENST00000539599 PRO0255Q9UI72 69 aa9.68□□□□□ -0.86
UBE3B-210ENST00000539599 IGHV4-28A0A0C4DH34 117 aa9.68□□□□□ -0.86
UBE3B-210ENST00000539599 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
UBE3B-210ENST00000539599 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
UBE3B-210ENST00000539599 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
UBE3B-210ENST00000539599 LECT2O14960 151 aa9.67□□□□□ -0.86
UBE3B-210ENST00000539599 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
UBE3B-210ENST00000539599 ANGP03950 147 aaKnown RBP9.67□□□□□ -0.86
UBE3B-210ENST00000539599 C3orf56Q8N813 242 aa9.67□□□□□ -0.86
UBE3B-210ENST00000539599 B5MCH6 92 aa9.66□□□□□ -0.86
UBE3B-210ENST00000539599 TRACP01848 142 aa9.66□□□□□ -0.86
UBE3B-210ENST00000539599 GAGE2AQ6NT46 116 aa9.66□□□□□ -0.86
UBE3B-210ENST00000539599 Q8NDZ9 215 aa9.66□□□□□ -0.86
UBE3B-210ENST00000539599 TENM3Q9P273 2699 aa9.66□□□□□ -0.86
UBE3B-210ENST00000539599 IBA57-AS1B1ANH7 110 aa9.66□□□□□ -0.86
UBE3B-210ENST00000539599 SS18Q15532 418 aa9.66□□□□□ -0.86
UBE3B-210ENST00000539599 C6orf223Q8N319 242 aa9.65□□□□□ -0.86
UBE3B-210ENST00000539599 C14orf132Q9NPU4 83 aa9.65□□□□□ -0.86
UBE3B-210ENST00000539599 SS18L2Q9UHA2 77 aa9.65□□□□□ -0.86
UBE3B-210ENST00000539599 MALP21145 153 aa9.65□□□□□ -0.86
UBE3B-210ENST00000539599 CHCHD10Q8WYQ3 142 aaPredicted RBP9.64□□□□□ -0.87
UBE3B-210ENST00000539599 NCR3O14931 201 aa9.63□□□□□ -0.87
UBE3B-210ENST00000539599 STAB1Q9NY15 2570 aa9.63□□□□□ -0.87
UBE3B-210ENST00000539599 DAD1P61803 113 aa9.63□□□□□ -0.87
UBE3B-210ENST00000539599 DNAL4O96015 105 aa9.62□□□□□ -0.87
UBE3B-210ENST00000539599 REG3AQ06141 175 aa9.62□□□□□ -0.87
UBE3B-210ENST00000539599 C10orf25Q5T742 122 aa9.62□□□□□ -0.87
UBE3B-210ENST00000539599 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
UBE3B-210ENST00000539599 FLNBO75369 2602 aaKnown RBP9.62□□□□□ -0.87
UBE3B-210ENST00000539599 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
UBE3B-210ENST00000539599 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
UBE3B-210ENST00000539599 FAM240AA0A1B0GVK7 77 aa9.61□□□□□ -0.87
UBE3B-210ENST00000539599 NANOS2P60321 138 aaKnown RBP9.6□□□□□ -0.87
UBE3B-210ENST00000539599 Q8IZM0 81 aa9.6□□□□□ -0.87
UBE3B-210ENST00000539599 FAM236AA0A1B0GUQ0 79 aa9.59□□□□□ -0.87
UBE3B-210ENST00000539599 FAM236BA0A1B0GV22 79 aa9.59□□□□□ -0.87
UBE3B-210ENST00000539599 C9orf66Q5T8R8 295 aa9.59□□□□□ -0.87
UBE3B-210ENST00000539599 Q8NAQ8 132 aa9.59□□□□□ -0.87
UBE3B-210ENST00000539599 RETNQ9HD89 108 aa9.59□□□□□ -0.87
UBE3B-210ENST00000539599 NOTCH1P46531 2555 aa9.59□□□□□ -0.87
UBE3B-210ENST00000539599 UNQ6190/PRO20217Q6UXQ8 127 aa9.58□□□□□ -0.88
UBE3B-210ENST00000539599 KLK12Q9UKR0 248 aa9.58□□□□□ -0.88
UBE3B-210ENST00000539599 F8P00451 2351 aa9.57□□□□□ -0.88
UBE3B-210ENST00000539599 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
UBE3B-210ENST00000539599 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
UBE3B-210ENST00000539599 MAST4O15021 2626 aa9.57□□□□□ -0.88
UBE3B-210ENST00000539599 LYRM9A8MSI8 78 aa9.57□□□□□ -0.88
UBE3B-210ENST00000539599 Q6Q795 121 aa9.57□□□□□ -0.88
UBE3B-210ENST00000539599 SMIM9A6NGZ8 99 aa9.56□□□□□ -0.88
UBE3B-210ENST00000539599 IGHV4-30-4P0DP06 118 aa9.56□□□□□ -0.88
UBE3B-210ENST00000539599 IGKV3D-7A0A0C4DH55 119 aa9.55□□□□□ -0.88
UBE3B-210ENST00000539599 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
UBE3B-210ENST00000539599 CMYA5Q8N3K9 4069 aa9.55□□□□□ -0.88
UBE3B-210ENST00000539599 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
UBE3B-210ENST00000539599 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
UBE3B-210ENST00000539599 LINC00846Q9NV44 126 aa9.53□□□□□ -0.88
UBE3B-210ENST00000539599 APOC4P55056 127 aa9.53□□□□□ -0.88
UBE3B-210ENST00000539599 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
UBE3B-210ENST00000539599 H0YGX0 51 aa9.52□□□□□ -0.88
UBE3B-210ENST00000539599 C6orf99Q4VX62 202 aa9.52□□□□□ -0.88
UBE3B-210ENST00000539599 SPAG11BQ08648 103 aa9.52□□□□□ -0.89
UBE3B-210ENST00000539599 MRPL23Q16540 153 aaKnown RBP9.52□□□□□ -0.89
UBE3B-210ENST00000539599 CXCL5P42830 114 aa9.52□□□□□ -0.89
UBE3B-210ENST00000539599 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.89
UBE3B-210ENST00000539599 CYSRT1A8MQ03 144 aa9.51□□□□□ -0.89
UBE3B-210ENST00000539599 INAFM2P0DMQ5 153 aa9.51□□□□□ -0.89
UBE3B-210ENST00000539599 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
UBE3B-210ENST00000539599 A0A087WVE0 104 aa9.51□□□□□ -0.89
UBE3B-210ENST00000539599 ACYP1P07311 99 aa9.51□□□□□ -0.89
UBE3B-210ENST00000539599 ENHOQ6UWT2 76 aa9.51□□□□□ -0.89
UBE3B-210ENST00000539599 RPL18AQ02543 176 aaKnown RBP9.5□□□□□ -0.89
UBE3B-210ENST00000539599 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
UBE3B-210ENST00000539599 SPART-AS1P0CW21 52 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms