RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ODF3L2Q3SX64 289 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 OXLD1Q5BKU9 147 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 LINC00242Q5T6M2 205 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 Q6JHZ5 121 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 COX7CP15954 63 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 REG3GQ6UW15 175 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 SPINK6Q6UWN8 80 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 HRCT1Q6UXD1 115 aa4.68□□□□□ -1.66
LSAMP-207ENST00000539563 M0QXV9 152 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 Q6Q795 121 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 GAS8-AS1O95177 125 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 Q8N814 137 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 SPG11Q96JI7 2443 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 FHL2Q14192 279 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 COX6A2Q02221 97 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 Q8N9L7 120 aa4.67□□□□□ -1.66
LSAMP-207ENST00000539563 TRAV7A0A075B6U4 112 aa4.66□□□□□ -1.66
LSAMP-207ENST00000539563 BEAN1Q3B7T3 259 aa4.66□□□□□ -1.66
LSAMP-207ENST00000539563 C5orf42Q9H799 3197 aa4.66□□□□□ -1.66
LSAMP-207ENST00000539563 A0A1B0GUV1 79 aa4.66□□□□□ -1.66
LSAMP-207ENST00000539563 AMELXQ99217 191 aa4.66□□□□□ -1.66
LSAMP-207ENST00000539563 NTM-AS1Q6ZSK4 140 aa4.66□□□□□ -1.66
LSAMP-207ENST00000539563 FAM30AQ9NZY2 134 aa4.66□□□□□ -1.66
LSAMP-207ENST00000539563 UNQ6190/PRO20217Q6UXQ8 127 aa4.65□□□□□ -1.66
LSAMP-207ENST00000539563 SNURFQ9Y675 71 aa4.65□□□□□ -1.66
LSAMP-207ENST00000539563 EDN2P20800 178 aa4.65□□□□□ -1.66
LSAMP-207ENST00000539563 WFDC13Q8IUB5 93 aa4.65□□□□□ -1.66
LSAMP-207ENST00000539563 LAMA1P25391 3075 aa4.65□□□□□ -1.67
LSAMP-207ENST00000539563 PRYO14603 147 aa4.64□□□□□ -1.67
LSAMP-207ENST00000539563 C2orf48Q96LS8 159 aa4.64□□□□□ -1.67
LSAMP-207ENST00000539563 IGLV5-52A0A0A0MRZ9 124 aa4.64□□□□□ -1.67
LSAMP-207ENST00000539563 IGLV4-60A0A075B6I1 120 aa4.64□□□□□ -1.67
LSAMP-207ENST00000539563 C1orf137Q5JT78 98 aa4.64□□□□□ -1.67
LSAMP-207ENST00000539563 SMR3AQ99954 134 aa4.64□□□□□ -1.67
LSAMP-207ENST00000539563 MUC4Q99102 2169 aa4.64□□□□□ -1.67
LSAMP-207ENST00000539563 URB1-AS1Q96HZ7 61 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 C6orf223Q8N319 242 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 NHLRC4P0CG21 123 aaPredicted RBP4.63□□□□□ -1.67
LSAMP-207ENST00000539563 BSNQ9UPA5 3926 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 COL4A2P08572 1712 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 TRBV10-3A0A0K0K1G6 114 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 A6NED7 52 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 CIRBP-AS1Q8TBR5 109 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 CUL9Q8IWT3 2517 aa4.63□□□□□ -1.67
LSAMP-207ENST00000539563 LINC00694P0DN24 101 aa4.62□□□□□ -1.67
LSAMP-207ENST00000539563 KRTAP10-9P60411 292 aa4.62□□□□□ -1.67
LSAMP-207ENST00000539563 Q6ZTC4 211 aa4.62□□□□□ -1.67
LSAMP-207ENST00000539563 CFAP47Q6ZTR5 3102 aa4.62□□□□□ -1.67
LSAMP-207ENST00000539563 VPS13AQ96RL7 3174 aa4.62□□□□□ -1.67
LSAMP-207ENST00000539563 RETNQ9HD89 108 aa4.62□□□□□ -1.67
LSAMP-207ENST00000539563 Q6ZVQ6 151 aa4.62□□□□□ -1.67
LSAMP-207ENST00000539563 C9orf116Q5BN46 136 aaPredicted RBP4.62□□□□□ -1.67
LSAMP-207ENST00000539563 ACACBO00763 2458 aa4.61□□□□□ -1.67
LSAMP-207ENST00000539563 LINC00310P59036 64 aa4.61□□□□□ -1.67
LSAMP-207ENST00000539563 ESRGQ1W209 222 aa4.61□□□□□ -1.67
LSAMP-207ENST00000539563 LYPD5Q6UWN5 251 aa4.61□□□□□ -1.67
LSAMP-207ENST00000539563 A0A087WYN8 130 aa4.61□□□□□ -1.67
LSAMP-207ENST00000539563 SMIM26A0A096LP01 95 aa4.61□□□□□ -1.67
LSAMP-207ENST00000539563 DCHS1Q96JQ0 3298 aa4.6□□□□□ -1.67
LSAMP-207ENST00000539563 XGP55808 180 aa4.6□□□□□ -1.67
LSAMP-207ENST00000539563 SONP18583 2426 aaKnown RBP4.6□□□□□ -1.67
LSAMP-207ENST00000539563 TSPEAR-AS2P59090 65 aa4.6□□□□□ -1.67
LSAMP-207ENST00000539563 Q8N2B8 174 aa4.6□□□□□ -1.67
LSAMP-207ENST00000539563 Q9BRP9 147 aa4.6□□□□□ -1.67
LSAMP-207ENST00000539563 Q6ZSN1 163 aa4.6□□□□□ -1.67
LSAMP-207ENST00000539563 CCDC179H3BU77 68 aa4.59□□□□□ -1.67
LSAMP-207ENST00000539563 PRR3P79522 188 aaKnown RBP4.59□□□□□ -1.67
LSAMP-207ENST00000539563 LINC01556Q5JQF7 62 aa4.59□□□□□ -1.67
LSAMP-207ENST00000539563 ADAMTSL4-AS1Q5T5F5 129 aa4.59□□□□□ -1.67
LSAMP-207ENST00000539563 C1orf134Q5TEV5 83 aa4.59□□□□□ -1.67
LSAMP-207ENST00000539563 LINC01546A6NGU7 62 aa4.59□□□□□ -1.67
LSAMP-207ENST00000539563 HIVEP3Q5T1R4 2406 aa4.59□□□□□ -1.68
LSAMP-207ENST00000539563 LINC00575Q6W349 94 aa4.58□□□□□ -1.68
LSAMP-207ENST00000539563 A0A1W2PPR1 153 aa4.58□□□□□ -1.68
LSAMP-207ENST00000539563 LINC00208Q96KT6 92 aa4.58□□□□□ -1.68
LSAMP-207ENST00000539563 A0A0U1RQV1 116 aa4.58□□□□□ -1.68
LSAMP-207ENST00000539563 LIMD2Q9BT23 127 aa4.58□□□□□ -1.68
LSAMP-207ENST00000539563 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
LSAMP-207ENST00000539563 CELA1Q9UNI1 258 aa4.57□□□□□ -1.68
LSAMP-207ENST00000539563 WDR87Q6ZQQ6 2873 aa4.57□□□□□ -1.68
LSAMP-207ENST00000539563 A0A096LNJ9 63 aa4.57□□□□□ -1.68
LSAMP-207ENST00000539563 FHL3Q13643 280 aa4.57□□□□□ -1.68
LSAMP-207ENST00000539563 FSHBP01225 129 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 CXCL6P80162 114 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 BDP1A6H8Y1 2624 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 H0Y9P7 68 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 FAM19A4Q96LR4 140 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 ABCA2Q9BZC7 2435 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 IGHV6-1A0A0B4J1U7 121 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 Q6ZRU5 148 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 PRR4Q16378 134 aa4.56□□□□□ -1.68
LSAMP-207ENST00000539563 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
LSAMP-207ENST00000539563 KIF25-AS1Q9Y6Z4 181 aa4.55□□□□□ -1.68
LSAMP-207ENST00000539563 Q8N3U1 123 aa4.55□□□□□ -1.68
LSAMP-207ENST00000539563 TRBV7-7A0A0K0K1E9 115 aa4.55□□□□□ -1.68
LSAMP-207ENST00000539563 H3BNG1 76 aa4.55□□□□□ -1.68
LSAMP-207ENST00000539563 hDV103S1A0JD37 113 aa4.55□□□□□ -1.68
LSAMP-207ENST00000539563 C11orf72Q8NBR9 251 aa4.55□□□□□ -1.68
LSAMP-207ENST00000539563 TTC28Q96AY4 2481 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms